FFCP PHASE1:Hg19::chr13:111806083..111806105,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:111806083..111806105,+
|short_description=p6@ARHGEF7
|description=CAGE_peak_6_at_ARHGEF7_5end
|association_with_transcript=0bp_to_ENST00000375736_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000375736_5end | |||
|cluster_id=chr13:111806083..111806105,+ | |||
|description=CAGE_peak_6_at_ARHGEF7_5end | |||
|id=chr13:111806083..111806105,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.36e-31!140;CL:0000037!1.77e-25!172;CL:0000566!1.77e-25!172;CL:0000988!1.05e-23!182;CL:0002032!1.61e-22!165;CL:0000837!1.61e-22!165;CL:0002087!7.73e-22!119;CL:0002031!1.37e-21!124;CL:0000766!1.63e-14!76;CL:0002057!3.03e-14!42;CL:0000860!1.00e-13!45;CL:0000557!2.96e-12!71;CL:0000542!1.04e-11!53;CL:0000051!1.04e-11!53;CL:0000763!2.40e-11!112;CL:0000049!2.40e-11!112;CL:0000838!3.13e-11!52;CL:0002009!1.87e-10!65;CL:0000839!6.51e-10!70;CL:0002194!1.66e-09!63;CL:0000576!1.66e-09!63;CL:0000040!1.66e-09!63;CL:0000559!1.66e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-18;33!CL:0002057;1.83e-18;33!CL:0000473;3.08e-12;39!CL:0000234;3.08e-12;39!CL:0000576;1.99e-10;48!CL:0000094;4.75e-10;8!CL:0000766;7.26e-10;69!CL:0002087;9.70e-09;104!CL:0000738;2.68e-08;136!CL:0000081;3.56e-08;11!CL:0000542;5.84e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.36e-41,136;CL:0000037,5.65e-35,168;CL:0000988,1.42e-32,177;CL:0002032,1.49e-30,161;CL:0000837,1.49e-30,161;CL:0002031,4.59e-27,120;CL:0002087,7.11e-27,115;CL:0000860,5.57e-21,42;CL:0002057,5.57e-21,42;CL:0000766,7.32e-21,72;CL:0000763,1.94e-17,108;CL:0000049,1.94e-17,108;CL:0000557,5.37e-17,67;CL:0000473,6.44e-17,48;CL:0000234,6.44e-17,48;CL:0002009,3.84e-14,61;CL:0000839,1.06e-13,66;CL:0002194,1.49e-12,59;CL:0000576,1.49e-12,59;CL:0000040,1.49e-12,59;CL:0000559,1.49e-12,59;CL:0000542,1.53e-12,53;CL:0000051,1.53e-12,53;CL:0000838,8.15e-12,52;CL:0000094,4.71e-10,8;CL:0000134,4.90e-09,354;CL:0002320,2.39e-08,361;CL:0000081,2.95e-08,11;CL:0000219,8.38e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.12e-16;42!CL:0000051;5.84e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.54e-11!102;UBERON:0003061!3.54e-11!102;UBERON:0002193!1.04e-10!112;UBERON:0002371!3.10e-09!80;UBERON:0001474!1.62e-08!86;UBERON:0002405!2.57e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.00e-16,98;UBERON:0003061,3.00e-16,98;UBERON:0002405,8.42e-16,93;UBERON:0002193,1.64e-15,108;UBERON:0002371,1.90e-13,76;UBERON:0001474,3.27e-12,82;UBERON:0004765,4.81e-10,90;UBERON:0001434,6.69e-08,100;UBERON:0002384,1.97e-07,371 | |||
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| ||
|short_description=p6@ARHGEF7 | |||
}} | }} |
Latest revision as of 13:59, 16 September 2015
Short description: | p6@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGEF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375736_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.36e-41 | 136 |
hematopoietic stem cell | 5.65e-35 | 168 |
hematopoietic cell | 1.42e-32 | 177 |
hematopoietic oligopotent progenitor cell | 1.49e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-30 | 161 |
hematopoietic lineage restricted progenitor cell | 4.59e-27 | 120 |
nongranular leukocyte | 7.11e-27 | 115 |
classical monocyte | 5.57e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.57e-21 | 42 |
myeloid leukocyte | 7.32e-21 | 72 |
myeloid cell | 1.94e-17 | 108 |
common myeloid progenitor | 1.94e-17 | 108 |
granulocyte monocyte progenitor cell | 5.37e-17 | 67 |
defensive cell | 6.44e-17 | 48 |
phagocyte | 6.44e-17 | 48 |
macrophage dendritic cell progenitor | 3.84e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.06e-13 | 66 |
monopoietic cell | 1.49e-12 | 59 |
monocyte | 1.49e-12 | 59 |
monoblast | 1.49e-12 | 59 |
promonocyte | 1.49e-12 | 59 |
lymphocyte | 1.53e-12 | 53 |
common lymphoid progenitor | 1.53e-12 | 53 |
lymphoid lineage restricted progenitor cell | 8.15e-12 | 52 |
granulocyte | 4.71e-10 | 8 |
mesenchymal cell | 4.90e-09 | 354 |
connective tissue cell | 2.39e-08 | 361 |
blood cell | 2.95e-08 | 11 |
motile cell | 8.38e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.00e-16 | 98 |
blood island | 3.00e-16 | 98 |
immune system | 8.42e-16 | 93 |
hemolymphoid system | 1.64e-15 | 108 |
bone marrow | 1.90e-13 | 76 |
bone element | 3.27e-12 | 82 |
skeletal element | 4.81e-10 | 90 |
skeletal system | 6.69e-08 | 100 |
connective tissue | 1.97e-07 | 371 |