FFCP PHASE1:Hg19::chr11:125937329..125937360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38004 | |HGNC=38004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000524793_5end | |association_with_transcript=-73bp_to_ENST00000524793_5end | ||
|cluster_id=chr11:125937329..125937360,+ | |||
|coexpression_cluster_id=C248 | |||
|description=CAGE_peak_1_at_NAP1L1P1_5end | |description=CAGE_peak_1_at_NAP1L1P1_5end | ||
|id=chr11:125937329..125937360,+ | |id=chr11:125937329..125937360,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.54e-20!42;CL:0000860!1.86e-18!45;CL:0000839!8.24e-16!70;CL:0000557!3.14e-14!71;CL:0000763!2.69e-13!112;CL:0000049!2.69e-13!112;CL:0000766!2.87e-12!76;CL:0002009!3.10e-12!65;CL:0002194!7.95e-12!63;CL:0000576!7.95e-12!63;CL:0000040!7.95e-12!63;CL:0000559!7.95e-12!63;CL:0002031!6.45e-09!124;CL:0002032!1.89e-08!165;CL:0000837!1.89e-08!165;CL:0000738!1.50e-07!140;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172;CL:0000197!6.10e-07!6;CL:0000098!6.10e-07!6;CL:0002167!6.10e-07!6 | |ontology_enrichment_celltype=CL:0002057!1.54e-20!42;CL:0000860!1.86e-18!45;CL:0000839!8.24e-16!70;CL:0000557!3.14e-14!71;CL:0000763!2.69e-13!112;CL:0000049!2.69e-13!112;CL:0000766!2.87e-12!76;CL:0002009!3.10e-12!65;CL:0002194!7.95e-12!63;CL:0000576!7.95e-12!63;CL:0000040!7.95e-12!63;CL:0000559!7.95e-12!63;CL:0002031!6.45e-09!124;CL:0002032!1.89e-08!165;CL:0000837!1.89e-08!165;CL:0000738!1.50e-07!140;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172;CL:0000197!6.10e-07!6;CL:0000098!6.10e-07!6;CL:0002167!6.10e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;7.84e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.24e-10,66;CL:0000763,1.45e-10,108;CL:0000049,1.45e-10,108;CL:0000557,3.09e-09,67;CL:0000860,3.31e-09,42;CL:0002057,3.31e-09,42;CL:0000473,1.30e-08,48;CL:0000234,1.30e-08,48;CL:0000453,6.03e-08,5;CL:0000766,2.83e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.83e-13!86;UBERON:0002371!2.24e-12!80;UBERON:0004765!7.42e-11!101;UBERON:0001434!7.42e-11!101;UBERON:0001737!8.19e-11!9;UBERON:0002390!6.54e-08!102;UBERON:0003061!6.54e-08!102;UBERON:0002193!2.25e-07!112;UBERON:0002405!2.46e-07!115;UBERON:0002204!7.40e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.80e-17;9!UBERON:0001557;2.80e-17;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.25e-17,9;UBERON:0002371,1.59e-08,76;UBERON:0004765,4.08e-08,90;UBERON:0001474,1.66e-07,82;UBERON:0001557,3.75e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,3.01347264011988,0.730310090387373,2.43966399395253,0,0,0,0,0.273748850145768,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,1.13362783106643,0,0.232429036905685,3.28934310417461,1.23882548358041,0.863077176966451,0,0.709446689665756,0.344745680736619,1.29096936716765,0,0.376484679085209,1.36453075028923,1.12361742222542,0,0.320929027076094,0,0.659702600373432,0.398927315243264,1.27867425159808,0.580418477257168,0.56738522469114,0,0.502497330513487,1.0429658368404,1.08594422352558,1.21079900526674,0.368277635987565,1.26584954976354,2.74631872205524,1.27562579979026,1.04829322754188,0.44931452458598,0.150176892841506,1.28580469357664,0.285012743741249,2.38700012638908,3.83594722905731,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,1.17030546773475,0.32592226663359,0,0,1.55974639639243,0.294605907474837,0.664601683750863,1.89562704635511,0.896639238079726,0.390178042679635,0.986627427622057,0.276350017785848,1.44901542867526,0.444859689486181,0.535081656179426,0,1.58633079776593,0,0.34362744548263,2.02415753615602,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,2.30152611318355,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,2.1185468930115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,3.54430297706659,0,0,0,5.01102776138317,0,0,0,0,0,0,0,0,0,0,2.27088765788066,3.6497735907583,0,0,0,0,0,1.41968160047813,1.18009283054671,2.16909926895134,1.65440959098591,2.17879444092406,2.13543557199987,1.34831308160164,1.37355025587742,2.30848294167834,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,1.15930404975077,1.76113041353732,0,0.462985512576611,1.33177906564219,0,0,0,0,0,0,5.71139235876122,5.52922879245307,0.179117045405697,0,0,0,1.40877494421162,1.03664057770386,2.59415916150531,1.38866676769018,1.65094525159639,0,0,0,0.102827492703324,0.600686115687835,2.85826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.623912584592421,2.14114786556594,1.73472656537328,1.52283839490527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76231551918512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,3.39866086332371,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4457519183256,1.57198465620994,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,2.59697552219644,0,0,0,10.0253790836027,1.86220955581764,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0,0,0,0.23874448473769,2.07875276582847,0,5.96488588659779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,1.52581736317083,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.638002319463839,2.38153742844842,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,2.40168115483916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,0,1.44677833618517,1.65047323916681,4.56984371832104,2.69968669861801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.655745261419609,0,6.2024772597689,2.56255156294123,0,1.72022758707021,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0,0,5.33886732957922,0,0,0,0,0,2.24901556081802,0,3.31764966272684,0,0.521745061811734,0,1.52322084867518,0,0,0.107410557042488,1.39210127963548,1.59238355479446,0,3.09056134664514,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,2.5244319659539,4.08913485639611,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,2.8339315265117,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,3.12431239445539,0,0,0,0,0,0,0,0,0,1.82089681270989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,3.01347264011988,0.730310090387373,2.43966399395253,0,0,0,0,0.273748850145768,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.436194716338694,1.13362783106643,0,0.232429036905685,3.28934310417461,1.23882548358041,0.863077176966451,0,0.709446689665756,0.344745680736619,1.29096936716765,0,0.376484679085209,1.36453075028923,1.12361742222542,0,0.320929027076094,0,0.659702600373432,0.398927315243264,1.27867425159808,0.580418477257168,0.56738522469114,0,0.502497330513487,1.0429658368404,1.08594422352558,1.21079900526674,0.368277635987565,1.26584954976354,2.74631872205524,1.27562579979026,1.04829322754188,0.44931452458598,0.150176892841506,1.28580469357664,0.285012743741249,2.38700012638908,3.83594722905731,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,1.17030546773475,0.32592226663359,0,0,1.55974639639243,0.294605907474837,0.664601683750863,1.89562704635511,0.896639238079726,0.390178042679635,0.986627427622057,0.276350017785848,1.44901542867526,0.444859689486181,0.535081656179426,0,1.58633079776593,0,0.34362744548263,2.02415753615602,0,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,2.30152611318355,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,2.1185468930115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,3.54430297706659,0,0,0,5.01102776138317,0,0,0,0,0,0,0,0,0,0,2.27088765788066,3.6497735907583,0,0,0,0,0,1.41968160047813,1.18009283054671,2.16909926895134,1.65440959098591,2.17879444092406,2.13543557199987,1.34831308160164,1.37355025587742,2.30848294167834,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,1.15930404975077,1.76113041353732,0,0.462985512576611,1.33177906564219,0,0,0,0,0,0,5.71139235876122,5.52922879245307,0.179117045405697,0,0,0,1.40877494421162,1.03664057770386,2.59415916150531,1.38866676769018,1.65094525159639,0,0,0,0.102827492703324,0.600686115687835,2.85826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,0,0,0,5.70547620162874,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.623912584592421,2.14114786556594,1.73472656537328,1.52283839490527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76231551918512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,3.39866086332371,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4457519183256,1.57198465620994,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,2.59697552219644,0,0,0,10.0253790836027,1.86220955581764,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0,0,0,0.23874448473769,2.07875276582847,0,5.96488588659779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0,1.52581736317083,0,0,0,0,0,0,0,0,0.0897576444097721,0,0.638002319463839,2.38153742844842,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,2.40168115483916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,0,1.44677833618517,1.65047323916681,4.56984371832104,2.69968669861801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.655745261419609,0,6.2024772597689,2.56255156294123,0,1.72022758707021,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0,0,5.33886732957922,0,0,0,0,0,2.24901556081802,0,3.31764966272684,0,0.521745061811734,0,1.52322084867518,0,0,0.107410557042488,1.39210127963548,1.59238355479446,0,3.09056134664514,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,2.5244319659539,4.08913485639611,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,2.8339315265117,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,3.12431239445539,0,0,0,0,0,0,0,0,0,1.82089681270989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@NAP1L1P1 | |short_description=p1@NAP1L1P1 | ||
}} | }} |
Latest revision as of 13:53, 16 September 2015
Short description: | p1@NAP1L1P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAP1L1P1_5end |
Coexpression cluster: | C248_iPS_Aortic_Hep2_amygdala_acute_medial_Myoblast |
Association with transcript: | -73bp_to_ENST00000524793_5end |
EntrezGene: | NA |
HGNC: | 38004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.24e-10 | 66 |
myeloid cell | 1.45e-10 | 108 |
common myeloid progenitor | 1.45e-10 | 108 |
granulocyte monocyte progenitor cell | 3.09e-09 | 67 |
classical monocyte | 3.31e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.31e-09 | 42 |
defensive cell | 1.30e-08 | 48 |
phagocyte | 1.30e-08 | 48 |
Langerhans cell | 6.03e-08 | 5 |
myeloid leukocyte | 2.83e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.25e-17 | 9 |
bone marrow | 1.59e-08 | 76 |
skeletal element | 4.08e-08 | 90 |
bone element | 1.66e-07 | 82 |
upper respiratory tract | 3.75e-07 | 19 |