FFCP PHASE1:Hg19::chr14:92302549..92302564,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:92302549..92302564,- to FFCP PHASE1:Hg19::chr14:92302549..92302564,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123036 | |EntrezGene=123036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19859 | |HGNC=19859 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9U0 | |UniProt=Q8N9U0 | ||
|association_with_transcript=219bp_to_ENST00000340892_5end | |||
|cluster_id=chr14:92302549..92302564,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_9_at_TC2N_5end | |||
|id=chr14:92302549..92302564,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.66e-18;1!UBERON:0006298;8.72e-18;1!UBERON:0008801;8.72e-18;1 | |||
|ontology_enrichment_disease=DOID:5093!6.33e-07!4;DOID:1612!6.33e-07!4;DOID:299!7.93e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.12e-17;4!DOID:1612;1.12e-17;4!DOID:3493;9.06e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.04e-18,4;DOID:1612,8.04e-18,4;DOID:3493,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-16!115;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0004119!1.20e-09!169;UBERON:0000925!1.20e-09!169;UBERON:0006595!1.20e-09!169;UBERON:0004921!1.78e-09!129;UBERON:0004185!1.78e-09!129;UBERON:0000077!7.39e-08!130;UBERON:0006562!1.87e-07!11;UBERON:0000161!1.88e-07!35;UBERON:0005156!7.62e-07!59;UBERON:0000990!7.62e-07!59;UBERON:0001829!9.93e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;9.90e-34;2!UBERON:0001831;8.72e-18;1!UBERON:0001736;8.72e-18;1!UBERON:0001567;8.72e-18;1!UBERON:0001044;6.00e-12;6!UBERON:0003293;6.00e-12;6!UBERON:0003294;6.00e-12;6!UBERON:0010047;6.00e-12;6!UBERON:0003408;6.00e-12;6!UBERON:0000167;6.00e-12;6!UBERON:0003127;9.06e-10;2!UBERON:0004089;1.44e-09;2!UBERON:0000310;1.24e-07;10!UBERON:0001443;5.15e-07;11!UBERON:0002114;8.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.64e-33,2;UBERON:0001736,8.72e-18,1;UBERON:0006298,8.72e-18,1;UBERON:0001831,1.44e-17,1;UBERON:0001567,1.44e-17,1;UBERON:0008801,1.44e-17,1;UBERON:0001044,7.08e-12,6;UBERON:0003293,7.08e-12,6;UBERON:0003294,7.08e-12,6;UBERON:0010047,7.08e-12,6;UBERON:0000167,7.08e-12,6;UBERON:0003127,9.46e-10,2;UBERON:0004089,1.86e-09,2;UBERON:0000310,1.09e-07,10;UBERON:0003408,1.73e-07,10;UBERON:0001443,4.57e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,7.60901999966903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.10043013569766,0.414239055347196,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.451261970095544,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0.196300467230486,2.92603019957447,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,1.37618785021362,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.387533459016037,0.0620747142958579,0,0,0.808468755832877,0.217716747896961,0,0.202056159043763,2.07994395638761,0.332660356546013,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,7.60901999966903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,1.10043013569766,0.414239055347196,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.451261970095544,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0.196300467230486,2.92603019957447,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,1.37618785021362,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.387533459016037,0.0620747142958579,0,0,0.808468755832877,0.217716747896961,0,0.202056159043763,2.07994395638761,0.332660356546013,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p9@TC2N | |||
}} | }} |
Latest revision as of 13:44, 16 September 2015
Short description: | p9@TC2N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TC2N_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 219bp_to_ENST00000340892_5end |
EntrezGene: | TC2N |
HGNC: | 19859 |
UniProt: | Q8N9U0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.64e-33 | 2 |
submandibular gland | 8.72e-18 | 1 |
submandibular gland primordium | 8.72e-18 | 1 |
parotid gland | 1.44e-17 | 1 |
cheek | 1.44e-17 | 1 |
parotid gland primordium | 1.44e-17 | 1 |
saliva-secreting gland | 7.08e-12 | 6 |
gland of oral region | 7.08e-12 | 6 |
gland of foregut | 7.08e-12 | 6 |
oral gland | 7.08e-12 | 6 |
oral cavity | 7.08e-12 | 6 |
open tracheal system trachea | 9.46e-10 | 2 |
midface | 1.86e-09 | 2 |
breast | 1.09e-07 | 10 |
gland of gut | 1.73e-07 | 10 |
chest | 4.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.04e-18 | 4 |
breast cancer | 8.04e-18 | 4 |
signet ring cell adenocarcinoma | 8.69e-10 | 2 |