FFCP PHASE1:Hg19::chr10:117820754..117820758,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=151bp_to_BX648964_5end | |association_with_transcript=151bp_to_BX648964_5end | ||
|cluster_id=chr10:117820754..117820758,- | |||
|description=CAGE_peak_8_at_GFRA1_5end | |description=CAGE_peak_8_at_GFRA1_5end | ||
|id=chr10:117820754..117820758,- | |id=chr10:117820754..117820758,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.73e-07;6!CL:0000098;1.73e-07;6!CL:0002167;1.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.70e-07,6;CL:0000098,2.70e-07,6;CL:0002167,2.70e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;2.65e-07;4!DOID:1612;2.65e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.37e-07,4;DOID:1612,2.37e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.34e-23!115;UBERON:0001049!3.33e-13!57;UBERON:0005068!3.33e-13!57;UBERON:0006241!3.33e-13!57;UBERON:0007135!3.33e-13!57;UBERON:0003075!5.98e-13!86;UBERON:0007284!5.98e-13!86;UBERON:0002346!1.06e-11!90;UBERON:0000955!2.65e-11!69;UBERON:0006238!2.65e-11!69;UBERON:0005743!4.84e-11!86;UBERON:0001017!1.01e-10!82;UBERON:0002780!1.49e-10!41;UBERON:0001890!1.49e-10!41;UBERON:0006240!1.49e-10!41;UBERON:0000073!3.58e-10!94;UBERON:0001016!3.58e-10!94;UBERON:0003080!4.26e-10!42;UBERON:0001893!5.38e-10!34;UBERON:0000153!5.91e-10!129;UBERON:0007811!5.91e-10!129;UBERON:0003056!6.33e-10!61;UBERON:0002616!9.85e-10!59;UBERON:0002020!1.21e-09!34;UBERON:0003528!1.21e-09!34;UBERON:0000033!1.63e-09!123;UBERON:0002791!1.93e-09!33;UBERON:0001869!3.62e-09!32;UBERON:0000475!3.07e-08!365;UBERON:0004121!5.24e-08!169;UBERON:0000924!2.00e-07!173;UBERON:0006601!2.00e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!8.34e-23!115;UBERON:0001049!3.33e-13!57;UBERON:0005068!3.33e-13!57;UBERON:0006241!3.33e-13!57;UBERON:0007135!3.33e-13!57;UBERON:0003075!5.98e-13!86;UBERON:0007284!5.98e-13!86;UBERON:0002346!1.06e-11!90;UBERON:0000955!2.65e-11!69;UBERON:0006238!2.65e-11!69;UBERON:0005743!4.84e-11!86;UBERON:0001017!1.01e-10!82;UBERON:0002780!1.49e-10!41;UBERON:0001890!1.49e-10!41;UBERON:0006240!1.49e-10!41;UBERON:0000073!3.58e-10!94;UBERON:0001016!3.58e-10!94;UBERON:0003080!4.26e-10!42;UBERON:0001893!5.38e-10!34;UBERON:0000153!5.91e-10!129;UBERON:0007811!5.91e-10!129;UBERON:0003056!6.33e-10!61;UBERON:0002616!9.85e-10!59;UBERON:0002020!1.21e-09!34;UBERON:0003528!1.21e-09!34;UBERON:0000033!1.63e-09!123;UBERON:0002791!1.93e-09!33;UBERON:0001869!3.62e-09!32;UBERON:0000475!3.07e-08!365;UBERON:0004121!5.24e-08!169;UBERON:0000924!2.00e-07!173;UBERON:0006601!2.00e-07!173 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0,0.572471974262113,1.09499540058307,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0,0,0,0,0.0945348171640679,1.55210578223795,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0.558350568994769,0,0.0974370051611986,0,0.184099797284599,0.646584227275248,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,5.10804720835177,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0.982827216677626,2.36315962672562,0,0,1.54411029268673,0,0,0,0,0,0,0,7.18768510845476,0.234817388471643,0.144366447761074,0.925971025153221,1.52203321787679,3.95102198979638,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,3.44585807502342,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,1.24782516918484,6.42344359669782,2.20783381047509,1.05427273493442,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0.527758144464379,0,0,1.51141141271498,0,0,0,0,0,1.34324852833307,0,0,2.05160100093111,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0.275673144969061,0.429680979473094,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,4.28083360847872,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,1.19548792950642,0.828851746593443,0,1.32949287252801,0,2.48831670129446,0,0,0,0.197286811273867,0,4.44547960578548,6.78532922266653,0.0927680981618513,0,8.07326059364223,0,0,0,0,0,1.03423011972439,0,0.347249989866585,1.77148277162768,0.60298219312704,0,0,0.295547618953547,0,0,0,1.84680620409113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,4.97630965539252,1.41532103205343,3.66618086960175,0,0.86494757262552,0.626531697032732,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0.789168805698781,2.41981432097328,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,1.39641200636127,0.916641696046735,2.15361907373044,0.199679000498991,0.429226048136571,2.4548860318606,0.671834724867263,0,0,0,0,0,0.590564889088493,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0.945668487590378,0.262272940674991,0,0.179287339332845,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0.851940108927109,0,0.879313402068495,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,1.14681839138014,0,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,1.25783950876288,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,0,0,0,0.260994291965212,3.62729480819636,3.24131464053368,1.46842022703881,0.179088841081487,0.617602894321944,0.657852148736121,1.94358060540469,0.192914038270915,1.01365464391844,2.30617366729152,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,1.91841556955478,0,0,0,0,0,0,0,1.27201740261367,0,0,2.1160556621441,4.2874366829448,0.449604575675217,0,1.11743701340006,0.41023272848151,0.252071696221718,0.138314504928436,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.675375846183947,0.781078098613847,0,0.507326481551255,0.546974809018219,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0,0.339848664884159,0.263091094251396,0,0,0.863424021355654,0.314231179832004,0,7.30526976407596,0.215927591218621,2.38875843943525,0.285906176706625,0.790068058663633,0,0.521574816907738,0,0,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.821302454849976,0,2.4285549652957,0.935757853848423,0,0.475680363110274,0,0,0,0.617393264863557,0,0,1.22574160876953,0,0.392616934229891,0.297046400327086,5.494524458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|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0.492484232307152,0.204000691244253,0,0.572471974262113,1.09499540058307,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0,0,0,0,0.0945348171640679,1.55210578223795,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0.558350568994769,0,0.0974370051611986,0,0.184099797284599,0.646584227275248,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,5.10804720835177,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,0.982827216677626,2.36315962672562,0,0,1.54411029268673,0,0,0,0,0,0,0,7.18768510845476,0.234817388471643,0.144366447761074,0.925971025153221,1.52203321787679,3.95102198979638,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.958499421966331,3.44585807502342,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,1.24782516918484,6.42344359669782,2.20783381047509,1.05427273493442,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0.527758144464379,0,0,1.51141141271498,0,0,0,0,0,1.34324852833307,0,0,2.05160100093111,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0.275673144969061,0.429680979473094,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,4.28083360847872,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,1.19548792950642,0.828851746593443,0,1.32949287252801,0,2.48831670129446,0,0,0,0.197286811273867,0,4.44547960578548,6.78532922266653,0.0927680981618513,0,8.07326059364223,0,0,0,0,0,1.03423011972439,0,0.347249989866585,1.77148277162768,0.60298219312704,0,0,0.295547618953547,0,0,0,1.84680620409113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,4.97630965539252,1.41532103205343,3.66618086960175,0,0.86494757262552,0.626531697032732,0.202203398942031,0.802577647298789,0.702793337176017,0,0,0,0.789168805698781,2.41981432097328,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,1.39641200636127,0.916641696046735,2.15361907373044,0.199679000498991,0.429226048136571,2.4548860318606,0.671834724867263,0,0,0,0,0,0.590564889088493,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0.945668487590378,0.262272940674991,0,0.179287339332845,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0.851940108927109,0,0.879313402068495,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,1.14681839138014,0,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,1.25783950876288,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,2.80019435264208,0,0,0,0,0,0.260994291965212,3.62729480819636,3.24131464053368,1.46842022703881,0.179088841081487,0.617602894321944,0.657852148736121,1.94358060540469,0.192914038270915,1.01365464391844,2.30617366729152,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,0,1.91841556955478,0,0,0,0,0,0,0,1.27201740261367,0,0,2.1160556621441,4.2874366829448,0.449604575675217,0,1.11743701340006,0.41023272848151,0.252071696221718,0.138314504928436,1.77623210195036,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.675375846183947,0.781078098613847,0,0.507326481551255,0.546974809018219,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0,0.339848664884159,0.263091094251396,0,0,0.863424021355654,0.314231179832004,0,7.30526976407596,0.215927591218621,2.38875843943525,0.285906176706625,0.790068058663633,0,0.521574816907738,0,0,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.821302454849976,0,2.4285549652957,0.935757853848423,0,0.475680363110274,0,0,0,0.617393264863557,0,0,1.22574160876953,0,0.392616934229891,0.297046400327086,5.494524458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| ||
|short_description=p8@GFRA1 | |short_description=p8@GFRA1 | ||
}} | }} |
Latest revision as of 13:38, 16 September 2015
Short description: | p8@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GFRA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 151bp_to_BX648964_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.70e-07 | 6 |
sensory epithelial cell | 2.70e-07 | 6 |
olfactory epithelial cell | 2.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.37e-07 | 4 |
breast cancer | 2.37e-07 | 4 |