FFCP PHASE1:Hg19::chr1:1219377..1219385,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10601 | |||
|TSSclassifier=strong | |||
|UniProt=B1PS44,P51172 | |||
|association_with_transcript=-19bp_to_EU489064,U38254_5end | |||
|cluster_id=chr1:1219377..1219385,+ | |||
|description=CAGE_peak_1_at_SCNN1D_5end | |||
|id=chr1:1219377..1219385,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.59e-09!254;CL:0002621!2.63e-08!3;CL:0002328!6.42e-08!3;CL:0002076!3.47e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002621;7.08e-34;3!CL:0001014;7.77e-14;2!CL:0001016;7.77e-14;2!CL:0000650;1.21e-13;2!CL:1000500;1.21e-13;2!CL:1000618;1.21e-13;2!CL:1001318;1.21e-13;2!CL:0002173;1.21e-13;2!CL:0000669;1.80e-07;4!CL:0000244;1.80e-07;4!CL:0000731;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.66e-34,3;CL:0001014,8.28e-14,2;CL:0001016,8.28e-14,2;CL:0000650,1.55e-13,2;CL:1000500,1.55e-13,2;CL:1000618,1.55e-13,2;CL:1001318,1.55e-13,2;CL:0002173,1.55e-13,2;CL:0000244,1.80e-07,4;CL:0000731,1.80e-07,4;CL:0000669,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;7.62e-26;1!DOID:3603;7.62e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.93e-26,1;DOID:3603,5.93e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.63e-08!3;UBERON:0004815!6.42e-08!3;UBERON:0002031!6.42e-08!3;UBERON:0002553!1.65e-07!70;UBERON:0000166!2.09e-07!21;UBERON:0000464!6.06e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.08e-34;3!UBERON:0005795;7.62e-26;1!UBERON:0000486;3.19e-19;12!UBERON:0003929;3.66e-15;7!UBERON:0003567;1.21e-13;2!UBERON:0003838;1.21e-13;2!UBERON:0003586;1.21e-13;2!UBERON:0005169;1.21e-13;2!UBERON:0002321;1.21e-13;2!UBERON:0005215;1.21e-13;2!UBERON:0002303;1.21e-13;2!UBERON:0002319;1.21e-13;2!UBERON:0003350;2.13e-13;8!UBERON:0001828;2.13e-13;8!UBERON:0000344;7.82e-12;20!UBERON:0003729;1.29e-08;13!UBERON:0003891;1.80e-07;4!UBERON:0005911;6.19e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.66e-34,3;UBERON:0003567,1.55e-13,2;UBERON:0003838,1.55e-13,2;UBERON:0003586,1.55e-13,2;UBERON:0005169,1.55e-13,2;UBERON:0002321,1.55e-13,2;UBERON:0005215,1.55e-13,2;UBERON:0002303,1.55e-13,2;UBERON:0002319,1.55e-13,2;UBERON:0003350,1.83e-13,8;UBERON:0001828,1.83e-13,8;UBERON:0000344,6.87e-12,20;UBERON:0003729,1.17e-08,13;UBERON:0003891,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,3.54569956768085,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0.999048047910651,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,3.0952078182318,0.0607495566580247,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.963099152036517,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0.0981477185010256,0.11796972334774,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.454672189309436,0.267964130156178,0,0,0,0,0.258355639344024,0.248298857183432,0,0,0,0.870866991587845,0,0.606168477131288,0.717222053926764,0,0,0.213454691755431,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p1@SCNN1D | |||
}} |
Latest revision as of 13:28, 16 September 2015
Short description: | p1@SCNN1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCNN1D_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_EU489064, U38254_5end |
EntrezGene: | SCNN1D |
HGNC: | 10601 |
UniProt: | B1PS44P51172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.66e-34 | 3 |
CD1a-positive Langerhans cell | 8.28e-14 | 2 |
immature CD1a-positive Langerhans cell | 8.28e-14 | 2 |
mesangial cell | 1.55e-13 | 2 |
kidney interstitial cell | 1.55e-13 | 2 |
juxtaglomerular complex cell | 1.55e-13 | 2 |
renal interstitial pericyte | 1.55e-13 | 2 |
extraglomerular mesangial cell | 1.55e-13 | 2 |
transitional epithelial cell | 1.80e-07 | 4 |
urothelial cell | 1.80e-07 | 4 |
pericyte cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.66e-34 | 3 |
abdomen connective tissue | 1.55e-13 | 2 |
abdominal segment connective tissue | 1.55e-13 | 2 |
trunk connective tissue | 1.55e-13 | 2 |
interstitial tissue | 1.55e-13 | 2 |
extraglomerular mesangium | 1.55e-13 | 2 |
kidney interstitium | 1.55e-13 | 2 |
juxtaglomerular apparatus | 1.55e-13 | 2 |
mesangium | 1.55e-13 | 2 |
epithelium of mucosa | 1.83e-13 | 8 |
gingiva | 1.83e-13 | 8 |
mucosa | 6.87e-12 | 20 |
mouth mucosa | 1.17e-08 | 13 |
stroma | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.93e-26 | 1 |
mucinous cystadenocarcinoma | 5.93e-26 | 1 |