FFCP PHASE1:Hg19::chr10:116852602..116852626,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29063 | |||
|TSSclassifier=strong | |||
|UniProt=F5H129,Q5VV63 | |||
|association_with_transcript=-497bp_to_ENST00000485327,ENST00000529665,NM_207303,uc001lce.2,uc001lcf.2,uc001lcg.2,uc009xyq.2_5end | |||
|cluster_id=chr10:116852602..116852626,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_ATRNL1_5end | |||
|id=chr10:116852602..116852626,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.60e-07!5;CL:0000047!9.81e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.80e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.72e-52!86;UBERON:0001017!2.57e-50!82;UBERON:0000073!5.51e-50!94;UBERON:0001016!5.51e-50!94;UBERON:0001049!5.86e-50!57;UBERON:0005068!5.86e-50!57;UBERON:0006241!5.86e-50!57;UBERON:0007135!5.86e-50!57;UBERON:0001869!5.68e-49!32;UBERON:0001893!6.06e-49!34;UBERON:0002020!6.77e-49!34;UBERON:0003528!6.77e-49!34;UBERON:0002780!1.72e-48!41;UBERON:0001890!1.72e-48!41;UBERON:0006240!1.72e-48!41;UBERON:0003080!3.94e-47!42;UBERON:0002791!1.14e-46!33;UBERON:0002616!3.36e-45!59;UBERON:0002619!6.38e-44!22;UBERON:0000955!2.78e-41!69;UBERON:0006238!2.78e-41!69;UBERON:0001950!1.72e-39!20;UBERON:0000956!4.57e-38!25;UBERON:0000203!4.57e-38!25;UBERON:0007023!3.06e-37!115;UBERON:0003075!6.80e-37!86;UBERON:0007284!6.80e-37!86;UBERON:0002346!1.42e-36!90;UBERON:0003056!6.27e-34!61;UBERON:0000033!9.38e-25!123;UBERON:0000153!2.53e-24!129;UBERON:0007811!2.53e-24!129;UBERON:0000924!2.88e-24!173;UBERON:0006601!2.88e-24!173;UBERON:0004121!5.24e-24!169;UBERON:0000200!2.54e-15!6;UBERON:0000025!1.15e-14!194;UBERON:0001872!4.14e-13!5;UBERON:0002021!2.21e-12!5;UBERON:0002308!4.04e-12!9;UBERON:0000125!4.04e-12!9;UBERON:0001871!4.59e-11!7;UBERON:0004111!9.94e-11!241;UBERON:0002420!3.58e-09!9;UBERON:0007245!3.58e-09!9;UBERON:0010009!3.58e-09!9;UBERON:0010011!3.58e-09!9;UBERON:0000454!3.58e-09!9;UBERON:0009663!1.74e-08!7;UBERON:0002771!2.83e-08!3;UBERON:0000349!2.84e-08!5;UBERON:0000477!2.96e-08!286;UBERON:0000483!9.73e-08!309;UBERON:0000064!1.47e-07!219;UBERON:0000119!1.52e-07!312;UBERON:0000988!2.23e-07!3;UBERON:0000475!2.56e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.94e-118;22!UBERON:0001950;6.89e-116;20!UBERON:0000956;6.37e-104;25!UBERON:0000203;6.37e-104;25!UBERON:0001869;2.12e-97;32!UBERON:0001893;1.42e-91;34!UBERON:0002791;1.47e-87;32!UBERON:0003528;4.43e-82;34!UBERON:0002020;4.43e-82;34!UBERON:0002780;5.79e-60;41!UBERON:0001890;5.79e-60;41!UBERON:0000200;5.18e-46;6!UBERON:0001872;4.30e-39;5!UBERON:0000073;3.01e-36;53!UBERON:0002616;3.01e-36;53!UBERON:0001871;1.55e-27;6!UBERON:0001017;2.96e-27;75!UBERON:0000955;7.92e-27;68!UBERON:0002021;9.96e-25;5!UBERON:0001870;4.74e-24;3!UBERON:0001016;7.39e-17;83!UBERON:0002702;1.37e-16;2!UBERON:0002771;2.56e-16;2!UBERON:0000349;2.83e-14;5!UBERON:0002581;3.17e-09;1!UBERON:0002902;3.17e-09;1!UBERON:0002022;3.17e-09;1!UBERON:0009899;3.17e-09;1!UBERON:0007190;3.17e-09;1!UBERON:0007023;4.31e-09;114!UBERON:0001882;8.16e-09;1!UBERON:0003112;8.16e-09;1!UBERON:0011158;8.16e-09;1!UBERON:0003128;8.16e-09;1!UBERON:0005403;8.16e-09;1!UBERON:0001703;8.16e-09;1!UBERON:0002241;8.16e-09;1!UBERON:0011216;1.85e-08;132!UBERON:0002420;4.95e-08;9!UBERON:0007245;4.95e-08;9!UBERON:0010009;4.95e-08;9!UBERON:0010011;4.95e-08;9!UBERON:0000454;4.95e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.93e-117,22;UBERON:0001950,1.93e-115,20;UBERON:0001869,5.67e-109,32;UBERON:0000956,1.57e-103,25;UBERON:0000203,1.57e-103,25;UBERON:0001893,1.50e-102,34;UBERON:0002791,7.24e-99,32;UBERON:0003528,5.03e-93,34;UBERON:0002020,5.03e-93,34;UBERON:0002780,6.97e-85,41;UBERON:0001890,6.97e-85,41;UBERON:0003080,6.97e-85,41;UBERON:0006240,6.97e-85,41;UBERON:0000073,3.05e-65,53;UBERON:0002616,3.05e-65,53;UBERON:0001049,1.27e-61,56;UBERON:0005068,1.27e-61,56;UBERON:0006241,1.27e-61,56;UBERON:0007135,1.27e-61,56;UBERON:0003056,2.29e-56,61;UBERON:0000955,1.67e-54,68;UBERON:0006238,1.67e-54,68;UBERON:0001017,1.16e-49,81;UBERON:0000200,2.58e-46,6;UBERON:0001016,1.93e-44,89;UBERON:0003075,3.41e-41,82;UBERON:0007284,3.41e-41,82;UBERON:0002346,3.92e-39,86;UBERON:0001872,4.50e-39,5;UBERON:0010371,8.53e-32,104;UBERON:0007023,5.83e-29,114;UBERON:0001871,2.23e-27,6;UBERON:0010314,7.98e-27,132;UBERON:0002021,2.36e-24,5;UBERON:0001870,2.64e-24,3;UBERON:0004121,1.09e-21,171;UBERON:0000924,1.09e-21,171;UBERON:0006601,1.09e-21,171;UBERON:0011216,2.57e-17,223;UBERON:0000025,2.85e-17,192;UBERON:0002702,1.00e-16,2;UBERON:0002771,3.77e-16,2;UBERON:0000349,3.18e-14,5;UBERON:0004111,4.81e-13,240;UBERON:0007190,2.04e-09,1;UBERON:0002581,2.22e-09,1;UBERON:0000483,2.26e-09,306;UBERON:0000119,3.05e-09,309;UBERON:0002022,3.58e-09,1;UBERON:0002902,4.19e-09,1;UBERON:0009899,4.19e-09,1;UBERON:0003112,6.72e-09,1;UBERON:0011158,6.72e-09,1;UBERON:0003128,6.72e-09,1;UBERON:0001703,6.72e-09,1;UBERON:0002241,6.72e-09,1;UBERON:0004761,6.72e-09,1;UBERON:0009617,6.72e-09,1;UBERON:0001882,7.27e-09,1;UBERON:0005403,7.27e-09,1;UBERON:0002420,5.81e-08,9;UBERON:0007245,5.81e-08,9;UBERON:0010009,5.81e-08,9;UBERON:0010011,5.81e-08,9;UBERON:0000454,5.81e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,0.74214478529481,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.60298219312704,0,0.110579259931225,0,1.97446857438575,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,3.0607276163049,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,2.78567502205866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.953423842781029,0.321506296930038,0.412618309791701,0.415440338029185,0,0,2.36923270966296,0,0.0788057072991982,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.07444650333337,1.8778639605975,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,1.73418907760441,1.41696576325585,1.43670473151436,2.05116364240755,0.504143392443436,2.28218933131919,1.77623210195036,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,2.90411613859097,2.34323429584154,2.48024155801421,2.40980078736846,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,2.89400203676536,0,0,0.470958557103084,0.942693539496011,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58367662725476,0.872701380680755,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0,0.0918948995348449,0,0,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p5@ATRNL1 | |||
}} |
Latest revision as of 13:25, 16 September 2015
Short description: | p5@ATRNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATRNL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -497bp_to_ENST00000485327, ENST00000529665, NM_207303, uc001lce.2, uc001lcf.2, uc001lcg.2, uc009xyq.2_5end |
EntrezGene: | ATRNL1 |
HGNC: | 29063 |
UniProt: | F5H129Q5VV63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data