FFCP PHASE1:Hg19::chr5:156536146..156536178,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TDQ0 | |||
|association_with_transcript=-8bp_to_uc003lwk.1,uc003lwl.2_5end | |||
|cluster_id=chr5:156536146..156536178,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_HAVCR2_5end | |||
|id=chr5:156536146..156536178,- | |||
|ontology_enrichment_celltype=CL:0000037!2.39e-61!172;CL:0000566!2.39e-61!172;CL:0000738!1.44e-58!140;CL:0002032!2.46e-57!165;CL:0000837!2.46e-57!165;CL:0000988!4.26e-55!182;CL:0002031!3.35e-52!124;CL:0002087!3.31e-49!119;CL:0000763!3.34e-45!112;CL:0000049!3.34e-45!112;CL:0000557!8.25e-44!71;CL:0000766!1.27e-41!76;CL:0000839!1.59e-40!70;CL:0002009!7.83e-40!65;CL:0002057!3.36e-39!42;CL:0002194!4.61e-38!63;CL:0000576!4.61e-38!63;CL:0000040!4.61e-38!63;CL:0000559!4.61e-38!63;CL:0000860!3.48e-35!45;CL:0000838!2.57e-11!52;CL:0000542!7.06e-11!53;CL:0000051!7.06e-11!53;CL:0000451!1.46e-09!10;CL:0000084!2.36e-09!25;CL:0000827!2.36e-09!25;CL:0000134!3.50e-09!358;CL:0000990!2.19e-08!8;CL:0002320!2.42e-08!365;CL:0000791!2.63e-08!18;CL:0000789!2.63e-08!18;CL:0002420!2.63e-08!18;CL:0002419!2.63e-08!18;CL:0000790!2.63e-08!18;CL:0002393!3.38e-08!9;CL:0002397!3.38e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.65e-40;33!CL:0002057;2.65e-40;33!CL:0000473;2.01e-38;39!CL:0000234;2.01e-38;39!CL:0000576;3.66e-33;48!CL:0000766;1.17e-26;69!CL:0002087;7.44e-16;104!CL:0000738;2.63e-15;136!CL:0000763;4.07e-14;100!CL:0000451;1.36e-12;10!CL:0000990;5.61e-11;8!CL:0000988;2.06e-09;177!CL:0000840;3.68e-08;5!CL:0002393;5.11e-08;6!CL:0002397;5.11e-08;6!CL:0000235;4.04e-07;6!CL:0000453;9.03e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.85e-70,136;CL:0000557,1.41e-67,67;CL:0002031,2.26e-62,120;CL:0002009,4.86e-62,61;CL:0000037,5.15e-62,168;CL:0000766,1.30e-61,72;CL:0000839,1.39e-61,66;CL:0000473,1.32e-59,48;CL:0000234,1.32e-59,48;CL:0002194,1.63e-59,59;CL:0000576,1.63e-59,59;CL:0000040,1.63e-59,59;CL:0000559,1.63e-59,59;CL:0002087,2.21e-59,115;CL:0000988,4.37e-57,177;CL:0002032,8.93e-57,161;CL:0000837,8.93e-57,161;CL:0000860,8.95e-54,42;CL:0002057,8.95e-54,42;CL:0000763,1.40e-51,108;CL:0000049,1.40e-51,108;CL:0000451,1.23e-12,10;CL:0000134,1.66e-12,354;CL:0002320,1.01e-11,361;CL:0000990,5.22e-11,8;CL:0002393,9.51e-11,9;CL:0002397,9.51e-11,9;CL:0000219,4.88e-09,386;CL:0000840,3.56e-08,5;CL:0001029,3.56e-08,5;CL:0000838,2.05e-07,52;CL:0000542,3.72e-07,53;CL:0000051,3.72e-07,53;CL:0000235,3.98e-07,6;CL:0000453,8.57e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-38;42!CL:0000049;3.80e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.40e-48!102;UBERON:0003061!2.40e-48!102;UBERON:0002193!1.76e-43!112;UBERON:0002371!2.05e-38!80;UBERON:0001474!9.55e-34!86;UBERON:0002405!2.94e-29!115;UBERON:0004765!2.12e-25!101;UBERON:0001434!2.12e-25!101;UBERON:0007023!6.42e-23!115;UBERON:0003081!3.48e-13!216;UBERON:0002204!1.87e-08!167;UBERON:0002384!8.50e-08!375;UBERON:0001049!6.79e-07!57;UBERON:0005068!6.79e-07!57;UBERON:0006241!6.79e-07!57;UBERON:0007135!6.79e-07!57;UBERON:0000178!6.99e-07!15;UBERON:0000179!6.99e-07!15;UBERON:0000463!6.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-09;15!UBERON:0000179;1.81e-09;15!UBERON:0000463;1.81e-09;15!UBERON:0002390;7.02e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.20e-72,98;UBERON:0003061,2.20e-72,98;UBERON:0002193,1.43e-66,108;UBERON:0002371,1.65e-60,76;UBERON:0002405,5.79e-57,93;UBERON:0001474,2.38e-54,82;UBERON:0004765,1.98e-47,90;UBERON:0001434,2.30e-40,100;UBERON:0003081,9.52e-24,203;UBERON:0002204,1.48e-15,167;UBERON:0002384,4.23e-11,371;UBERON:0000178,1.63e-09,15;UBERON:0000179,1.63e-09,15;UBERON:0000463,1.63e-09,15;UBERON:0000926,2.43e-07,315;UBERON:0004120,2.43e-07,315;UBERON:0006603,2.43e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.14620108621927,0.821005894499457,0.708397031823113,20.454942396143,19.9591287010551,13.0045543585504,0,0,0,3.64095842727418,0,3.52320527201817,13.8498852132969,17.8484558248426,9.11445657006578,4.25439401055856,2.91504299417082,4.12120908214698,49.8715959013907,52.5247561727445,38.5708657288628,80.1880177324612,87.5787601486489,105.919578846125,170.026203862391,154.464906037048,214.962346968724,75.1545584005828,92.3043097524871,65.004713565284,78.4970555892662,78.8698773667174,89.6646702935888,83.5609026172564,87.2926953646975,63.9337125799041,122.704683669458,157.376825863468,134.260796417799,42.0803396011447,34.6104987061595,27.4041789558053,153.261685806613,150.187080505018,200.248114818118,36.3239701580021,86.9135220930653,53.7986058649504,11.6190407471568,6.80333759888139,7.96702852931828,17.0739519342673,12.3145052130035,13.0187725224635,6.27028036230747,4.17725022118089,3.83594722905731,0,0.546138611262131,0,0,0,0,1.32208974556972,0.954053754535364,0.569212969109448,1.17447437874188,0,1.32171328579026,5.04457706683382,2.37045676297569,0.786839080455332,0.393010762749165,0.822405995998037,10.1983762188314,1.95553359980154,1.4203434172042,0,14.4833593950726,2.94605907474837,1.99380505125259,2.16643091012012,5.25174410875268,9.49433237187111,37.6562801542418,42.2815527212348,32.7477486880609,1.77943875794473,1.87278579662799,3.1360657141493,14.0503584944982,1.91610246800961,1.03088233644789,1.77113784413652,5.73417745783374,2.60433381542567,0,3.76437797694432,1.91979916731628,2.49861453104692,3.31488152861624,4.10563998460523,2.41928091869679,0.267440195783507,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.89919659471683,0,0,21.0955805875544,22.4627361116055,16.4867871043393,2.62339686735876,4.57595928624102,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66299114001014,7.72214074959484,4.7561971932393,0,0,0,0,0,0,4.92663237895944,2.11316241631742,4.35389042635621,4.17947864909188,3.1560608356595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,6.52934218861764,4.21667878966063,0,0,0,0,0,0,0.336255431980582,13.2010609335291,9.05635814409973,13.8610479182128,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03011288817817,15.3157082581218,7.68438416184799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,1.27438136522519,0,0,0,0.261435451024901,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.426133137080504,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,4.05958087385735,3.82318603571188,4.5571774973933,5.71756261098694,4.93634727703433,3.24236655596359,2.70015718619057,3.96562588147135,0,0,0,0,0,0,0.159426272728822,0.997896857164083,21.8316121950898,2.75175657541048,0.649243880549111,8.70471252151722,0.684704037099577,0,0,0.677167111206413,0,0.605399121573143,0.425846237690326,0.343505344755765,0,0,0,0.586164286206121,0,0,0.270455678475983,0.99921590399346,2.81974010175699,0,2.05111450980652,0,5.126395676764,0,0,0.593929361665277,0,0,0.562677665642051,0,5.27372397525631,0,1.19548792950642,1.65770349318689,0,0,0.615424027305347,0,0,0,0,0.394573622547734,7.18449277040819,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0.627921025580099,1.16348177330109,0,0,0,0,0.953619473882272,0,0,0,0,0,0.707660516026713,0,0,0,0,1.7524294574976,0,1.1713222286267,0,0,0,0,1.20990716048664,0.61214552326098,2.33790344625405,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.387956065953678,0,0,0,0,0.633107959558787,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.36905378891993,2.55493176133945,0,0.788662062837943,1.39641200636127,0.458320848023367,0.717873024576814,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,1.1007533168552,1.59045937961861,0.817220436669454,0,0,0,35.3209009735856,14.702237136601,0.485996453264197,0,8.6686278029118,1.52118305591495,0,0,0,0.714695326373367,0,0,0,0,0,0,3.11951578847488,0,0.113312091520126,0.58620893471233,2.65013777824443,1.68067843270016,1.98348902614035,0,0,3.84434685243701,1.41483874589699,1.24271716604159,3.47316215268366,0,0,0,0,0.7520696820681,0.612691153526923,0,0,0,0.610131324509816,0.500763722825999,1.14681839138014,1.44207766997908,1.55241007353459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,3.89720617678777,7.17470137692161,6.05191958746624,0,0,0,13.9991177098451,0,1.03328987796489,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.798169295285756,0.41023272848151,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0.317079050969534,0,1.09651553371436,0.496211178389294,0,0,0,0.672567444437648,0.606965604236632,0.455324382702595,0.443511850813194,2.53514772622714,0,0.883606528698812,0.328863867814245,0,0,0.627944742804112,1.09980912941201,0,0.913158720509496,0,0,0.78624198594322,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.971421986118279,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0,0,0,2.74831853960923,2.97046400327086,0,0,4.69919589899268,8.31506754859146,0.299823467774787,0,0,0,0.730336388246517,0.917458566809082,2.00675416412032,0,0.543931921527318,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,4.97501663675268,1.75836092965222,0.426467963801962,0,1.87307838524418,3.22788514338461,0,0,0.404234377916439,0,0,2.6940821205835,0.645499848534087,0,0,0,0,0,0,0.488965776731466,0,0.665756774185513,3.62292828463847,10.2581917537035 | |||
|short_description=p3@HAVCR2 | |||
}} |
Latest revision as of 13:23, 16 September 2015
Short description: | p3@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAVCR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -8bp_to_uc003lwk.1, uc003lwl.2_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | Q8TDQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.20e-72 | 98 |
blood island | 2.20e-72 | 98 |
hemolymphoid system | 1.43e-66 | 108 |
bone marrow | 1.65e-60 | 76 |
immune system | 5.79e-57 | 93 |
bone element | 2.38e-54 | 82 |
skeletal element | 1.98e-47 | 90 |
skeletal system | 2.30e-40 | 100 |
lateral plate mesoderm | 9.52e-24 | 203 |
musculoskeletal system | 1.48e-15 | 167 |
connective tissue | 4.23e-11 | 371 |
blood | 1.63e-09 | 15 |
haemolymphatic fluid | 1.63e-09 | 15 |
organism substance | 1.63e-09 | 15 |
mesoderm | 2.43e-07 | 315 |
mesoderm-derived structure | 2.43e-07 | 315 |
presumptive mesoderm | 2.43e-07 | 315 |