FFCP PHASE1:Hg19::chr5:156534012..156534066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84868 | |EntrezGene=84868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |HGNC=18437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=227bp_to_ENST00000521665_5end | |association_with_transcript=227bp_to_ENST00000521665_5end | ||
|cluster_id=chr5:156534012..156534066,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_10_at_HAVCR2_5end | |description=CAGE_peak_10_at_HAVCR2_5end | ||
|id=chr5:156534012..156534066,- | |id=chr5:156534012..156534066,- | ||
|ontology_enrichment_celltype=CL:0002009!1.80e-70!65;CL:0002057!2.08e-70!42;CL:0002194!1.37e-67!63;CL:0000576!1.37e-67!63;CL:0000040!1.37e-67!63;CL:0000559!1.37e-67!63;CL:0000557!1.84e-65!71;CL:0000860!1.14e-64!45;CL:0000766!1.21e-62!76;CL:0000839!1.72e-61!70;CL:0000763!9.66e-53!112;CL:0000049!9.66e-53!112;CL:0000738!2.70e-47!140;CL:0002087!8.47e-42!119;CL:0000037!1.09e-41!172;CL:0000566!1.09e-41!172;CL:0002031!3.83e-39!124;CL:0000988!4.30e-38!182;CL:0002032!2.29e-37!165;CL:0000837!2.29e-37!165;CL:0002393!3.66e-15!9;CL:0002397!3.66e-15!9;CL:0000134!4.04e-11!358;CL:0002320!1.68e-10!365;CL:0000451!2.53e-10!10;CL:0000219!3.30e-09!390;CL:0000990!5.34e-08!8;CL:0000840!7.02e-07!5;CL:0001029!7.02e-07!5 | |ontology_enrichment_celltype=CL:0002009!1.80e-70!65;CL:0002057!2.08e-70!42;CL:0002194!1.37e-67!63;CL:0000576!1.37e-67!63;CL:0000040!1.37e-67!63;CL:0000559!1.37e-67!63;CL:0000557!1.84e-65!71;CL:0000860!1.14e-64!45;CL:0000766!1.21e-62!76;CL:0000839!1.72e-61!70;CL:0000763!9.66e-53!112;CL:0000049!9.66e-53!112;CL:0000738!2.70e-47!140;CL:0002087!8.47e-42!119;CL:0000037!1.09e-41!172;CL:0000566!1.09e-41!172;CL:0002031!3.83e-39!124;CL:0000988!4.30e-38!182;CL:0002032!2.29e-37!165;CL:0000837!2.29e-37!165;CL:0002393!3.66e-15!9;CL:0002397!3.66e-15!9;CL:0000134!4.04e-11!358;CL:0002320!1.68e-10!365;CL:0000451!2.53e-10!10;CL:0000219!3.30e-09!390;CL:0000990!5.34e-08!8;CL:0000840!7.02e-07!5;CL:0001029!7.02e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.05e-98;33!CL:0002057;4.05e-98;33!CL:0000473;3.85e-81;39!CL:0000234;3.85e-81;39!CL:0000576;4.02e-72;48!CL:0000766;7.00e-49;69!CL:0000763;1.34e-20;100!CL:0002393;5.24e-19;6!CL:0002397;5.24e-19;6!CL:0002087;6.11e-18;104!CL:0000738;8.09e-16;136!CL:0000875;1.15e-10;3!CL:0002396;1.15e-10;3!CL:0000767;3.84e-10;3!CL:0000226;8.64e-10;3!CL:0000842;8.64e-10;3!CL:0000988;2.87e-09;177!CL:0000840;3.69e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.10e-136,42;CL:0002057,5.10e-136,42;CL:0000473,6.28e-135,48;CL:0000234,6.28e-135,48;CL:0002009,5.47e-121,61;CL:0002194,2.69e-120,59;CL:0000576,2.69e-120,59;CL:0000040,2.69e-120,59;CL:0000559,2.69e-120,59;CL:0000766,5.75e-110,72;CL:0000557,2.69e-109,67;CL:0000839,1.55e-106,66;CL:0000763,1.00e-72,108;CL:0000049,1.00e-72,108;CL:0002087,1.01e-64,115;CL:0000738,8.04e-63,136;CL:0002031,2.35e-56,120;CL:0000037,1.26e-48,168;CL:0000988,1.49e-45,177;CL:0002032,4.88e-45,161;CL:0000837,4.88e-45,161;CL:0002393,6.00e-28,9;CL:0002397,6.00e-28,9;CL:0000134,1.21e-17,354;CL:0002320,4.61e-17,361;CL:0000219,5.16e-15,386;CL:0000048,1.65e-12,427;CL:0000034,1.85e-12,441;CL:0000723,3.66e-12,433;CL:0000875,1.21e-10,3;CL:0002396,1.21e-10,3;CL:0000767,3.90e-10,3;CL:0000226,7.15e-10,3;CL:0000842,7.15e-10,3;CL:0000840,3.28e-08,5;CL:0001029,3.28e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-96;42!CL:0000049;4.71e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-71!102;UBERON:0003061!2.10e-71!102;UBERON:0002193!4.93e-65!112;UBERON:0002371!4.40e-58!80;UBERON:0001474!1.00e-52!86;UBERON:0004765!3.98e-42!101;UBERON:0001434!3.98e-42!101;UBERON:0002405!4.82e-42!115;UBERON:0003081!1.92e-25!216;UBERON:0002204!2.86e-19!167;UBERON:0000178!2.17e-13!15;UBERON:0000179!2.17e-13!15;UBERON:0000463!2.17e-13!15;UBERON:0002384!4.05e-11!375;UBERON:0000926!5.05e-07!448;UBERON:0004120!5.05e-07!448;UBERON:0006603!5.05e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!2.10e-71!102;UBERON:0003061!2.10e-71!102;UBERON:0002193!4.93e-65!112;UBERON:0002371!4.40e-58!80;UBERON:0001474!1.00e-52!86;UBERON:0004765!3.98e-42!101;UBERON:0001434!3.98e-42!101;UBERON:0002405!4.82e-42!115;UBERON:0003081!1.92e-25!216;UBERON:0002204!2.86e-19!167;UBERON:0000178!2.17e-13!15;UBERON:0000179!2.17e-13!15;UBERON:0000463!2.17e-13!15;UBERON:0002384!4.05e-11!375;UBERON:0000926!5.05e-07!448;UBERON:0004120!5.05e-07!448;UBERON:0006603!5.05e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.09e-09;15!UBERON:0000179;4.09e-09;15!UBERON:0000463;4.09e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-95,76;UBERON:0002390,6.92e-95,98;UBERON:0003061,6.92e-95,98;UBERON:0001474,1.85e-87,82;UBERON:0002193,4.52e-85,108;UBERON:0004765,9.38e-79,90;UBERON:0002405,7.16e-76,93;UBERON:0001434,8.24e-70,100;UBERON:0003081,8.95e-40,203;UBERON:0002204,2.43e-37,167;UBERON:0000926,1.74e-23,315;UBERON:0004120,1.74e-23,315;UBERON:0006603,1.74e-23,315;UBERON:0002384,2.87e-16,371;UBERON:0000178,4.12e-09,15;UBERON:0000179,4.12e-09,15;UBERON:0000463,4.12e-09,15;UBERON:0000923,1.53e-07,560;UBERON:0010316,1.53e-07,560;UBERON:0005291,1.53e-07,560;UBERON:0006598,1.53e-07,560;UBERON:0010317,1.53e-07,560;UBERON:0002532,1.53e-07,560;UBERON:0002050,2.13e-07,564;UBERON:0005423,8.26e-07,581 | |||
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|short_description=p10@HAVCR2 | |short_description=p10@HAVCR2 | ||
}} | }} |
Latest revision as of 13:17, 16 September 2015
Short description: | p10@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HAVCR2_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 227bp_to_ENST00000521665_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.57e-95 | 76 |
hematopoietic system | 6.92e-95 | 98 |
blood island | 6.92e-95 | 98 |
bone element | 1.85e-87 | 82 |
hemolymphoid system | 4.52e-85 | 108 |
skeletal element | 9.38e-79 | 90 |
immune system | 7.16e-76 | 93 |
skeletal system | 8.24e-70 | 100 |
lateral plate mesoderm | 8.95e-40 | 203 |
musculoskeletal system | 2.43e-37 | 167 |
mesoderm | 1.74e-23 | 315 |
mesoderm-derived structure | 1.74e-23 | 315 |
presumptive mesoderm | 1.74e-23 | 315 |
connective tissue | 2.87e-16 | 371 |
blood | 4.12e-09 | 15 |
haemolymphatic fluid | 4.12e-09 | 15 |
organism substance | 4.12e-09 | 15 |
germ layer | 1.53e-07 | 560 |
germ layer / neural crest | 1.53e-07 | 560 |
embryonic tissue | 1.53e-07 | 560 |
presumptive structure | 1.53e-07 | 560 |
germ layer / neural crest derived structure | 1.53e-07 | 560 |
epiblast (generic) | 1.53e-07 | 560 |
embryonic structure | 2.13e-07 | 564 |
developing anatomical structure | 8.26e-07 | 581 |