FFCP PHASE1:Hg19::chr20:44563311..44563354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63935 | |EntrezGene=63935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16200 | |HGNC=16200 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5U5,Q9H4Z3 | |UniProt=B7Z5U5,Q9H4Z3 | ||
|association_with_transcript=0bp_to_ENST00000443130,NM_022104,uc002xqs.2_5end | |association_with_transcript=0bp_to_ENST00000443130,NM_022104,uc002xqs.2_5end | ||
|cluster_id=chr20:44563311..44563354,+ | |||
|description=CAGE_peak_1_at_PCIF1_5end | |description=CAGE_peak_1_at_PCIF1_5end | ||
|id=chr20:44563311..44563354,+ | |id=chr20:44563311..44563354,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.66e-19!140;CL:0000037!1.43e-14!172;CL:0000566!1.43e-14!172;CL:0002031!4.78e-14!124;CL:0000988!1.80e-13!182;CL:0002087!7.24e-13!119;CL:0002032!4.41e-12!165;CL:0000837!4.41e-12!165;CL:0002057!1.05e-10!42;CL:0000791!5.93e-10!18;CL:0000789!5.93e-10!18;CL:0002420!5.93e-10!18;CL:0002419!5.93e-10!18;CL:0000790!5.93e-10!18;CL:0000838!6.58e-10!52;CL:0000860!7.56e-10!45;CL:0000542!1.59e-09!53;CL:0000051!1.59e-09!53;CL:0000084!8.81e-08!25;CL:0000827!8.81e-08!25;CL:0000766!1.79e-07!76;CL:0000625!7.39e-07!11 | |ontology_enrichment_celltype=CL:0000738!1.66e-19!140;CL:0000037!1.43e-14!172;CL:0000566!1.43e-14!172;CL:0002031!4.78e-14!124;CL:0000988!1.80e-13!182;CL:0002087!7.24e-13!119;CL:0002032!4.41e-12!165;CL:0000837!4.41e-12!165;CL:0002057!1.05e-10!42;CL:0000791!5.93e-10!18;CL:0000789!5.93e-10!18;CL:0002420!5.93e-10!18;CL:0002419!5.93e-10!18;CL:0000790!5.93e-10!18;CL:0000838!6.58e-10!52;CL:0000860!7.56e-10!45;CL:0000542!1.59e-09!53;CL:0000051!1.59e-09!53;CL:0000084!8.81e-08!25;CL:0000827!8.81e-08!25;CL:0000766!1.79e-07!76;CL:0000625!7.39e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.87e-10;18!CL:0000789;5.87e-10;18!CL:0002419;5.87e-10;18!CL:0000084;8.56e-08;25!CL:0000236;6.28e-07;13!CL:0000625;7.63e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.69e-21,136;CL:0000037,1.78e-15,168;CL:0002031,3.80e-15,120;CL:0000988,1.90e-14,177;CL:0002087,6.27e-14,115;CL:0002032,6.74e-13,161;CL:0000837,6.74e-13,161;CL:0000860,1.05e-10,42;CL:0002057,1.05e-10,42;CL:0000791,5.93e-10,18;CL:0000789,5.93e-10,18;CL:0002420,5.93e-10,18;CL:0002419,5.93e-10,18;CL:0000790,5.93e-10,18;CL:0000838,6.58e-10,52;CL:0000542,1.59e-09,53;CL:0000051,1.59e-09,53;CL:0000766,1.95e-08,72;CL:0000473,6.23e-08,48;CL:0000234,6.23e-08,48;CL:0000084,8.81e-08,25;CL:0000827,8.81e-08,25;CL:0000625,7.39e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.87e-10;18!CL:0002057;4.92e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-09!115;UBERON:0002390!3.51e-08!102;UBERON:0003061!3.51e-08!102;UBERON:0002193!1.76e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.68e-09,114;UBERON:0002390,5.02e-09,98;UBERON:0003061,5.02e-09,98;UBERON:0002193,3.20e-08,108 | |||
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| ||
|short_description=p1@PCIF1 | |short_description=p1@PCIF1 | ||
}} | }} |
Latest revision as of 13:16, 16 September 2015
Short description: | p1@PCIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443130, NM_022104, uc002xqs.2_5end |
EntrezGene: | PCIF1 |
HGNC: | 16200 |
UniProt: | B7Z5U5Q9H4Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.69e-21 | 136 |
hematopoietic stem cell | 1.78e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 3.80e-15 | 120 |
hematopoietic cell | 1.90e-14 | 177 |
nongranular leukocyte | 6.27e-14 | 115 |
hematopoietic oligopotent progenitor cell | 6.74e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.74e-13 | 161 |
classical monocyte | 1.05e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-10 | 42 |
mature alpha-beta T cell | 5.93e-10 | 18 |
alpha-beta T cell | 5.93e-10 | 18 |
immature T cell | 5.93e-10 | 18 |
mature T cell | 5.93e-10 | 18 |
immature alpha-beta T cell | 5.93e-10 | 18 |
lymphoid lineage restricted progenitor cell | 6.58e-10 | 52 |
lymphocyte | 1.59e-09 | 53 |
common lymphoid progenitor | 1.59e-09 | 53 |
myeloid leukocyte | 1.95e-08 | 72 |
defensive cell | 6.23e-08 | 48 |
phagocyte | 6.23e-08 | 48 |
T cell | 8.81e-08 | 25 |
pro-T cell | 8.81e-08 | 25 |
CD8-positive, alpha-beta T cell | 7.39e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.68e-09 | 114 |
hematopoietic system | 5.02e-09 | 98 |
blood island | 5.02e-09 | 98 |
hemolymphoid system | 3.20e-08 | 108 |