FFCP PHASE1:Hg19::chr13:111318087..111318105,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79587 | |EntrezGene=79587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25695 | |HGNC=25695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537802_5end | |association_with_transcript=0bp_to_ENST00000537802_5end | ||
|cluster_id=chr13:111318087..111318105,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_5_at_CARS2_5end | |description=CAGE_peak_5_at_CARS2_5end | ||
|id=chr13:111318087..111318105,- | |id=chr13:111318087..111318105,- | ||
|ontology_enrichment_celltype=CL:0002057!9.53e-66!42;CL:0000860!2.37e-60!45;CL:0000766!9.83e-50!76;CL:0000738!1.43e-49!140;CL:0002087!1.65e-42!119;CL:0002194!6.44e-42!63;CL:0000576!6.44e-42!63;CL:0000040!6.44e-42!63;CL:0000559!6.44e-42!63;CL:0002009!3.46e-40!65;CL:0000839!5.21e-40!70;CL:0000037!8.24e-40!172;CL:0000566!8.24e-40!172;CL:0002031!1.12e-36!124;CL:0000988!2.45e-36!182;CL:0000557!1.39e-35!71;CL:0002032!1.64e-35!165;CL:0000837!1.64e-35!165;CL:0000763!3.01e-32!112;CL:0000049!3.01e-32!112;CL:0002393!3.26e-15!9;CL:0002397!3.26e-15!9;CL:0000094!3.94e-15!8;CL:0000081!1.94e-10!11;CL:0000134!2.29e-09!358;CL:0000236!3.38e-09!14;CL:0002320!8.21e-09!365;CL:0000219!6.58e-07!390;CL:0000775!6.82e-07!3 | |ontology_enrichment_celltype=CL:0002057!9.53e-66!42;CL:0000860!2.37e-60!45;CL:0000766!9.83e-50!76;CL:0000738!1.43e-49!140;CL:0002087!1.65e-42!119;CL:0002194!6.44e-42!63;CL:0000576!6.44e-42!63;CL:0000040!6.44e-42!63;CL:0000559!6.44e-42!63;CL:0002009!3.46e-40!65;CL:0000839!5.21e-40!70;CL:0000037!8.24e-40!172;CL:0000566!8.24e-40!172;CL:0002031!1.12e-36!124;CL:0000988!2.45e-36!182;CL:0000557!1.39e-35!71;CL:0002032!1.64e-35!165;CL:0000837!1.64e-35!165;CL:0000763!3.01e-32!112;CL:0000049!3.01e-32!112;CL:0002393!3.26e-15!9;CL:0002397!3.26e-15!9;CL:0000094!3.94e-15!8;CL:0000081!1.94e-10!11;CL:0000134!2.29e-09!358;CL:0000236!3.38e-09!14;CL:0002320!8.21e-09!365;CL:0000219!6.58e-07!390;CL:0000775!6.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.48e-75;33!CL:0002057;9.48e-75;33!CL:0000576;8.46e-56;48!CL:0000473;1.21e-51;39!CL:0000234;1.21e-51;39!CL:0000766;3.87e-40;69!CL:0000094;1.91e-23;8!CL:0002087;1.02e-20;104!CL:0000763;1.73e-17;100!CL:0002393;4.29e-17;6!CL:0002397;4.29e-17;6!CL:0000081;1.34e-16;11!CL:0000738;1.64e-15;136!CL:0000775;3.62e-10;3!CL:0000988;1.23e-09;177!CL:0000767;1.53e-09;3!CL:0000226;1.53e-08;3!CL:0000842;1.53e-08;3!CL:0000875;2.86e-08;3!CL:0002396;2.86e-08;3!CL:0000771;3.79e-07;2!CL:0000219;4.68e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-105,42;CL:0002057,1.38e-105,42;CL:0000473,6.58e-91,48;CL:0000234,6.58e-91,48;CL:0000766,4.48e-84,72;CL:0002194,2.29e-70,59;CL:0000576,2.29e-70,59;CL:0000040,2.29e-70,59;CL:0000559,2.29e-70,59;CL:0000738,9.22e-70,136;CL:0002009,1.02e-67,61;CL:0000839,8.71e-62,66;CL:0000557,1.05e-60,67;CL:0002087,8.00e-57,115;CL:0000037,1.20e-53,168;CL:0000763,7.09e-52,108;CL:0000049,7.09e-52,108;CL:0000988,3.71e-50,177;CL:0002031,3.22e-47,120;CL:0002032,7.38e-47,161;CL:0000837,7.38e-47,161;CL:0002393,1.39e-23,9;CL:0002397,1.39e-23,9;CL:0000094,1.89e-23,8;CL:0000134,1.71e-17,354;CL:0002320,7.37e-17,361;CL:0000081,1.33e-16,11;CL:0000219,1.25e-14,386;CL:0000048,6.50e-12,427;CL:0000034,1.06e-11,441;CL:0000723,1.54e-11,433;CL:0000775,3.62e-10,3;CL:0000767,1.53e-09,3;CL:0000226,1.49e-08,3;CL:0000842,1.49e-08,3;CL:0000875,3.10e-08,3;CL:0002396,3.10e-08,3;CL:0000771,3.73e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.55e-75;42!CL:0000049;9.41e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.59e-44!102;UBERON:0003061!5.59e-44!102;UBERON:0002193!2.45e-41!112;UBERON:0002371!5.52e-30!80;UBERON:0001474!6.50e-27!86;UBERON:0002405!5.25e-24!115;UBERON:0004765!7.12e-21!101;UBERON:0001434!7.12e-21!101;UBERON:0003081!6.01e-16!216;UBERON:0000178!1.88e-15!15;UBERON:0000179!1.88e-15!15;UBERON:0000463!1.88e-15!15;UBERON:0002204!5.08e-10!167;UBERON:0002384!4.58e-08!375;UBERON:0007023!6.73e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!5.59e-44!102;UBERON:0003061!5.59e-44!102;UBERON:0002193!2.45e-41!112;UBERON:0002371!5.52e-30!80;UBERON:0001474!6.50e-27!86;UBERON:0002405!5.25e-24!115;UBERON:0004765!7.12e-21!101;UBERON:0001434!7.12e-21!101;UBERON:0003081!6.01e-16!216;UBERON:0000178!1.88e-15!15;UBERON:0000179!1.88e-15!15;UBERON:0000463!1.88e-15!15;UBERON:0002204!5.08e-10!167;UBERON:0002384!4.58e-08!375;UBERON:0007023!6.73e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-24;15!UBERON:0000179;1.09e-24;15!UBERON:0000463;1.09e-24;15!UBERON:0002390;3.76e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.19e-71,98;UBERON:0003061,1.19e-71,98;UBERON:0002193,8.93e-64,108;UBERON:0002371,3.06e-52,76;UBERON:0001474,1.27e-47,82;UBERON:0002405,8.26e-43,93;UBERON:0004765,2.06e-42,90;UBERON:0001434,4.54e-37,100;UBERON:0003081,1.61e-27,203;UBERON:0000178,9.49e-25,15;UBERON:0000179,9.49e-25,15;UBERON:0000463,9.49e-25,15;UBERON:0002204,8.28e-18,167;UBERON:0002384,5.39e-16,371;UBERON:0000926,6.31e-13,315;UBERON:0004120,6.31e-13,315;UBERON:0006603,6.31e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6018566109342,11.8987113410136,11.1467608787575,0,0,0,0,0,0,22.713811749807,17.4473669299023,14.7567392086779,0,0,0,8.28769961043519,6.04601509902095,4.85168122375632,9.0647324393217,5.75635043230556,8.3620720141678,11.507695692886,6.40401766322752,11.1146648047635,17.2372840368309,3.87290810150296,12.1883837934908,8.84738995850242,4.09359225086769,8.98893937780339,8.57034898638527,7.06043859567406,8.95071976118658,10.8850929061616,8.7764009353518,8.09827026012119,8.70627715885752,3.97169657283798,11.8336227309159,7.28621129244555,7.30076085788282,12.5969529928968,9.6863920421339,13.2579948955523,10.7597211729901,8.23895616616573,6.80333759888139,18.2403021592287,30.6657163029932,17.7208733552977,21.5372286174087,6.27028036230747,3.18266683518544,6.57590953552682,3.51992488922645,1.63841583378639,0,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,1.90810750907073,1.1384259382189,2.93618594685469,0.382273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.383959833463255,3.74792179657038,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0,0.476981248610684,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,0,1.15508732651774,0,0,0,0,0,28.4622669099929,59.832291840805,48.0721995585801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,9.70713903683776,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2532187138938,15.2927441428475,13.1018853050057,6.90872148827588,11.9295059194996,18.8057260245888,11.8806916192385,16.6556287021797,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,9.57932369387759,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,1.31577485171795,0.966868319603658,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6018566109342,11.8987113410136,11.1467608787575,0,0,0,0,0,0,22.713811749807,17.4473669299023,14.7567392086779,0,0,0,8.28769961043519,6.04601509902095,4.85168122375632,9.0647324393217,5.75635043230556,8.3620720141678,11.507695692886,6.40401766322752,11.1146648047635,17.2372840368309,3.87290810150296,12.1883837934908,8.84738995850242,4.09359225086769,8.98893937780339,8.57034898638527,7.06043859567406,8.95071976118658,10.8850929061616,8.7764009353518,8.09827026012119,8.70627715885752,3.97169657283798,11.8336227309159,7.28621129244555,7.30076085788282,12.5969529928968,9.6863920421339,13.2579948955523,10.7597211729901,8.23895616616573,6.80333759888139,18.2403021592287,30.6657163029932,17.7208733552977,21.5372286174087,6.27028036230747,3.18266683518544,6.57590953552682,3.51992488922645,1.63841583378639,0,0.426730222566507,0.800791974072025,0.574752439954483,1.32208974556972,1.90810750907073,1.1384259382189,2.93618594685469,0.382273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.383959833463255,3.74792179657038,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0,0.476981248610684,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,0,1.15508732651774,0,0,0,0,0,28.4622669099929,59.832291840805,48.0721995585801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,9.70713903683776,5.33637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2532187138938,15.2927441428475,13.1018853050057,6.90872148827588,11.9295059194996,18.8057260245888,11.8806916192385,16.6556287021797,0,0,0,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,9.57932369387759,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0,0,1.31577485171795,0.966868319603658,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@CARS2 | |short_description=p5@CARS2 | ||
}} | }} |
Latest revision as of 13:16, 16 September 2015
Short description: | p5@CARS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CARS2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000537802_5end |
EntrezGene: | CARS2 |
HGNC: | 25695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.19e-71 | 98 |
blood island | 1.19e-71 | 98 |
hemolymphoid system | 8.93e-64 | 108 |
bone marrow | 3.06e-52 | 76 |
bone element | 1.27e-47 | 82 |
immune system | 8.26e-43 | 93 |
skeletal element | 2.06e-42 | 90 |
skeletal system | 4.54e-37 | 100 |
lateral plate mesoderm | 1.61e-27 | 203 |
blood | 9.49e-25 | 15 |
haemolymphatic fluid | 9.49e-25 | 15 |
organism substance | 9.49e-25 | 15 |
musculoskeletal system | 8.28e-18 | 167 |
connective tissue | 5.39e-16 | 371 |
mesoderm | 6.31e-13 | 315 |
mesoderm-derived structure | 6.31e-13 | 315 |
presumptive mesoderm | 6.31e-13 | 315 |