FFCP PHASE1:Hg19::chr10:116528515..116528563,-: Difference between revisions
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|id=chr10:116528515..116528563,-
|short_description=p34@ABLIM1
|description=CAGE_peak_34_at_ABLIM1_5end
|association_with_transcript=-496bp_to_uc001lbz.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3983 | |EntrezGene=3983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=78 | |HGNC=78 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-496bp_to_uc001lbz.1_5end | |||
|cluster_id=chr10:116528515..116528563,- | |||
|description=CAGE_peak_34_at_ABLIM1_5end | |||
|id=chr10:116528515..116528563,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.45e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p34@ABLIM1 | |||
}} | }} |
Latest revision as of 13:14, 16 September 2015
Short description: | p34@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_ABLIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -496bp_to_uc001lbz.1_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parietal lobe | 1.34e-20 | 5 |
dorsal plus ventral thalamus | 9.40e-14 | 2 |
thalamic complex | 9.40e-14 | 2 |
neocortex | 3.22e-11 | 20 |
regional part of cerebral cortex | 2.66e-10 | 22 |
regional part of forebrain | 7.93e-10 | 41 |
forebrain | 7.93e-10 | 41 |
anterior neural tube | 7.93e-10 | 41 |
future forebrain | 7.93e-10 | 41 |
cerebral cortex | 3.44e-09 | 25 |
pallium | 3.44e-09 | 25 |
brain | 4.45e-09 | 68 |
future brain | 4.45e-09 | 68 |
regional part of nervous system | 9.95e-08 | 53 |
regional part of brain | 9.95e-08 | 53 |
central nervous system | 1.11e-07 | 81 |
regional part of diencephalon | 1.59e-07 | 4 |
regional part of telencephalon | 2.26e-07 | 32 |
cerebral hemisphere | 2.26e-07 | 32 |
neural tube | 2.43e-07 | 56 |
neural rod | 2.43e-07 | 56 |
future spinal cord | 2.43e-07 | 56 |
neural keel | 2.43e-07 | 56 |
brain grey matter | 5.53e-07 | 34 |
gray matter | 5.53e-07 | 34 |
telencephalon | 5.53e-07 | 34 |
nervous system | 6.05e-07 | 89 |
pre-chordal neural plate | 8.93e-07 | 61 |