FFCP PHASE1:Hg19::chr1:121260993..121261024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=647121 | |EntrezGene=647121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38661 | |HGNC=38661 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=83bp_to_NR_003955,uc001eiu.1_5end | |association_with_transcript=83bp_to_NR_003955,uc001eiu.1_5end | ||
|cluster_id=chr1:121260993..121261024,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_EMBP1_5end | |description=CAGE_peak_1_at_EMBP1_5end | ||
|id=chr1:121260993..121261024,+ | |id=chr1:121260993..121261024,+ | ||
|ontology_enrichment_celltype=CL:0002087!5.97e-40!119;CL:0000738!8.93e-39!140;CL:0002031!9.17e-37!124;CL:0000037!3.87e-36!172;CL:0000566!3.87e-36!172;CL:0000988!2.60e-33!182;CL:0002032!2.75e-33!165;CL:0000837!2.75e-33!165;CL:0002057!6.81e-25!42;CL:0002009!1.84e-24!65;CL:0000860!2.87e-24!45;CL:0002194!5.20e-24!63;CL:0000576!5.20e-24!63;CL:0000040!5.20e-24!63;CL:0000559!5.20e-24!63;CL:0000557!3.98e-22!71;CL:0000839!1.13e-21!70;CL:0000766!1.98e-21!76;CL:0000763!1.41e-18!112;CL:0000049!1.41e-18!112;CL:0000838!4.90e-14!52;CL:0000542!5.67e-14!53;CL:0000051!5.67e-14!53;CL:0000791!4.38e-13!18;CL:0000789!4.38e-13!18;CL:0002420!4.38e-13!18;CL:0002419!4.38e-13!18;CL:0000790!4.38e-13!18;CL:0000084!1.18e-11!25;CL:0000827!1.18e-11!25;CL:0000625!1.90e-08!11 | |ontology_enrichment_celltype=CL:0002087!5.97e-40!119;CL:0000738!8.93e-39!140;CL:0002031!9.17e-37!124;CL:0000037!3.87e-36!172;CL:0000566!3.87e-36!172;CL:0000988!2.60e-33!182;CL:0002032!2.75e-33!165;CL:0000837!2.75e-33!165;CL:0002057!6.81e-25!42;CL:0002009!1.84e-24!65;CL:0000860!2.87e-24!45;CL:0002194!5.20e-24!63;CL:0000576!5.20e-24!63;CL:0000040!5.20e-24!63;CL:0000559!5.20e-24!63;CL:0000557!3.98e-22!71;CL:0000839!1.13e-21!70;CL:0000766!1.98e-21!76;CL:0000763!1.41e-18!112;CL:0000049!1.41e-18!112;CL:0000838!4.90e-14!52;CL:0000542!5.67e-14!53;CL:0000051!5.67e-14!53;CL:0000791!4.38e-13!18;CL:0000789!4.38e-13!18;CL:0002420!4.38e-13!18;CL:0002419!4.38e-13!18;CL:0000790!4.38e-13!18;CL:0000084!1.18e-11!25;CL:0000827!1.18e-11!25;CL:0000625!1.90e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.90e-41;33!CL:0002057;1.90e-41;33!CL:0000473;5.18e-35;39!CL:0000234;5.18e-35;39!CL:0000576;1.06e-24;48!CL:0000791;6.51e-23;18!CL:0000789;6.51e-23;18!CL:0002419;6.51e-23;18!CL:0000084;2.45e-21;25!CL:0000766;6.41e-16;69!CL:0002087;7.15e-16;104!CL:0000625;8.50e-15;11!CL:0000738;1.06e-11;136!CL:0000624;1.58e-11;6!CL:0000542;1.42e-09;53!CL:0000763;4.06e-08;100!CL:0000988;1.02e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.68e-53,115;CL:0000738,2.01e-51,136;CL:0002031,1.23e-46,120;CL:0000473,2.93e-45,48;CL:0000234,2.93e-45,48;CL:0000860,4.80e-45,42;CL:0002057,4.80e-45,42;CL:0000037,2.03e-44,168;CL:0000988,3.13e-42,177;CL:0002032,1.15e-38,161;CL:0000837,1.15e-38,161;CL:0002009,5.99e-34,61;CL:0002194,1.26e-33,59;CL:0000576,1.26e-33,59;CL:0000040,1.26e-33,59;CL:0000559,1.26e-33,59;CL:0000766,2.66e-30,72;CL:0000557,8.13e-30,67;CL:0000839,8.46e-29,66;CL:0000791,5.34e-23,18;CL:0000789,5.34e-23,18;CL:0002420,5.34e-23,18;CL:0002419,5.34e-23,18;CL:0000790,5.34e-23,18;CL:0000763,1.81e-21,108;CL:0000049,1.81e-21,108;CL:0000084,2.36e-21,25;CL:0000827,2.36e-21,25;CL:0000838,1.62e-16,52;CL:0000542,4.71e-16,53;CL:0000051,4.71e-16,53;CL:0000625,8.65e-15,11;CL:0000624,1.22e-11,6;CL:0000134,7.03e-11,354;CL:0002320,2.78e-10,361;CL:0000219,3.19e-08,386;CL:0000034,4.80e-07,441;CL:0000898,8.96e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.27e-33;42!CL:0000790;6.51e-23;18!CL:0000051;1.42e-09;53!CL:0000049;5.18e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.84e-23!102;UBERON:0003061!5.84e-23!102;UBERON:0002371!4.39e-20!80;UBERON:0002193!1.49e-19!112;UBERON:0001474!1.71e-18!86;UBERON:0002405!1.05e-14!115;UBERON:0004765!3.41e-14!101;UBERON:0001434!3.41e-14!101 | |ontology_enrichment_uberon=UBERON:0002390!5.84e-23!102;UBERON:0003061!5.84e-23!102;UBERON:0002371!4.39e-20!80;UBERON:0002193!1.49e-19!112;UBERON:0001474!1.71e-18!86;UBERON:0002405!1.05e-14!115;UBERON:0004765!3.41e-14!101;UBERON:0001434!3.41e-14!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-26,76;UBERON:0002390,2.91e-26,98;UBERON:0003061,2.91e-26,98;UBERON:0002193,1.10e-23,108;UBERON:0001474,1.32e-23,82;UBERON:0002405,5.40e-22,93;UBERON:0004765,1.13e-21,90;UBERON:0001434,2.77e-18,100;UBERON:0002384,1.78e-09,371;UBERON:0002204,3.45e-07,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0,0.0821005894499457,0.157421562627358,2.75354993794233,1.15148819429164,2.94150634300544,0,0,0,0.387336002901508,0.995184627411951,2.64240395401362,1.10799081706375,1.20326668482085,1.73608696572681,0.223915474239924,0.32389366601898,0.257575567634187,1.59938062657521,2.26725566213286,3.88134497900506,1.39457422143411,1.6446715520873,2.47765096716083,2.01384674625505,2.0492856522328,3.31075121844019,2.41321976515633,1.93645405075148,6.77132432971709,2.25890807451126,2.18324920046277,3.82029923556644,3.36692281607993,0.962787081228281,4.47535988059329,1.64925650093358,2.39356389145958,3.40979800426155,2.03146467040009,2.8369261234557,3.11411124497787,1.50749199154046,3.12889751052121,5.64690996233303,1.21079900526674,2.94622108790052,6.32924774881769,1.05627643155971,0.637812899895131,1.67726916406701,3.93150209012733,3.90459921387916,2.89306056054744,0.570025487482497,0.59675003159727,0.365328307529268,0,2.18455444504853,0.889509253863555,0.426730222566507,0.400395987036012,1.72425731986345,1.98313461835459,0.954053754535364,1.70763890732835,0.587237189370939,0.382273228125229,3.96513985737078,1.68152568894461,1.31692042387539,3.540775862049,4.32311839024081,4.31763147898969,6.52027332023645,2.93330039970231,5.20792586308207,3.89653456815823,8.0215528957325,10.0166008541445,11.2982286237647,8.93652750424551,3.71464827204458,5.46249259751489,6.74195408875072,6.07970039128866,8.11448640058147,5.78317596332036,5.61835738988397,6.27213142829861,8.27158201692233,16.0952607312807,7.21617635513523,9.86776798876061,4.14135038621326,3.25541726928209,0.950452044448374,4.51725357233318,4.09557155694139,1.24930726552346,3.31488152861624,4.10563998460523,2.82249440514625,2.67440195783507,2.60683926989038,0,0,0,0,0,0,0,0,0.283604451492204,0,0.263504357079378,0.196468613246569,0.728590576585084,0,0.649094787309367,0.174129737299267,0.26591592103773,0.476981248610684,1.71598473234038,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,1.43402297694502,0.365921118388786,0.132529768321485,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0.354920400119532,0.842923450390509,0.482022059766964,0.772057809126758,0.653638332277218,0.474541238222193,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0.502644862058154,0.277765335475589,0,0,0,0,0.70445216541493,0,0,0,0,0,0.984868024349589,0.468008530278475,1.63494278517601,0,0.335964256397719,1.84307626415102,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,2.43247561282381,2.51128545716063,0,0,0,5.70547620162874,0,0,0,0.784596007954691,0.985153801009636,2.15627574859517,1.66845947163673,0.508189248444927,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.07857100409308,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.616122696835318,0.784349769176855,0,0.527758144464379,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0.261435451024901,0.512900250232778,0.328014645699706,0,0.515205058238611,0.824125183365091,0.82509499920588,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0,0.0890320356467374,0.495854746082934,0.192190067365106,1.14851441245126,0.2023155617111,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0.717056761020258,0.392996164052485,0,0,0,0,0.379473173765715,0,0.48111056362756,0,2.17781969722645,0.376575203107117,0.43050537267123,0,0,0.459446800413919,0,0,0,0.952927101831156,1.23408681925858,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0.490080431962063,0.185803175125719,0.28853842595289,1.4939787103167,1.4348364545594,0.199579371432817,0.766021480529467,0.846694330895531,0.973865820823666,0.561594356226918,0.228234679033192,0,2.50634477090067,0.50787533340481,0,0,2.98092366383228,1.37402137902306,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0.270455678475983,0,1.4098700508785,0,0,0.121360521749513,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,1.26675244876796,0,0.828851746593443,0,0.409074730008619,0,0,0.629078458031288,0.179021174675609,0,0.197286811273867,0,0,0,0.185536196323703,1.99613798001194,0,0,0.724999575434793,0,1.27126825146383,0.236387681767936,0,0,0.868124974666461,0,0.120596438625408,0,0.663475559587348,0.295547618953547,0,0,0,0.307801034015188,0,0,0,0.108647371922008,0,0,0,2.04386596391473,0.31396051279005,0.4986350457004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| ||
|short_description=p1@EMBP1 | |short_description=p1@EMBP1 | ||
}} | }} |
Latest revision as of 13:08, 16 September 2015
Short description: | p1@EMBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMBP1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 83bp_to_NR_003955, uc001eiu.1_5end |
EntrezGene: | EMBP1 |
HGNC: | 38661 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.94e-26 | 76 |
hematopoietic system | 2.91e-26 | 98 |
blood island | 2.91e-26 | 98 |
hemolymphoid system | 1.10e-23 | 108 |
bone element | 1.32e-23 | 82 |
immune system | 5.40e-22 | 93 |
skeletal element | 1.13e-21 | 90 |
skeletal system | 2.77e-18 | 100 |
connective tissue | 1.78e-09 | 371 |
musculoskeletal system | 3.45e-07 | 167 |