FFCP PHASE1:Hg19::chr2:113999360..113999386,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7849 | |EntrezGene=7849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8622 | |HGNC=8622 | ||
|TSSclassifier=strong | |||
|UniProt=G3V463 | |UniProt=G3V463 | ||
|association_with_transcript=-4bp_to_ENST00000497038_5end | |association_with_transcript=-4bp_to_ENST00000497038_5end | ||
|cluster_id=chr2:113999360..113999386,- | |||
|coexpression_cluster_id=C687 | |||
|description=CAGE_peak_4_at_PAX8_5end | |description=CAGE_peak_4_at_PAX8_5end | ||
|id=chr2:113999360..113999386,- | |id=chr2:113999360..113999386,- | ||
|ontology_enrichment_celltype=CL:0002194!6.65e-20!63;CL:0000576!6.65e-20!63;CL:0000040!6.65e-20!63;CL:0000559!6.65e-20!63;CL:0002009!1.07e-18!65;CL:0000839!9.09e-17!70;CL:0000557!2.88e-16!71;CL:0000860!2.92e-15!45;CL:0002057!2.02e-14!42;CL:0000766!5.43e-14!76 | |ontology_enrichment_celltype=CL:0002194!6.65e-20!63;CL:0000576!6.65e-20!63;CL:0000040!6.65e-20!63;CL:0000559!6.65e-20!63;CL:0002009!1.07e-18!65;CL:0000839!9.09e-17!70;CL:0000557!2.88e-16!71;CL:0000860!2.92e-15!45;CL:0002057!2.02e-14!42;CL:0000766!5.43e-14!76 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.35e-52;39!CL:0000234;8.35e-52;39!CL:0000860;1.20e-51;33!CL:0002057;1.20e-51;33!CL:0000576;5.31e-32;48!CL:0000766;2.15e-23;69!CL:0000235;1.02e-13;6!CL:0002619;2.72e-11;3!CL:0000763;8.60e-11;100!CL:0002087;9.58e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.37e-58,59;CL:0000576,1.37e-58,59;CL:0000040,1.37e-58,59;CL:0000559,1.37e-58,59;CL:0000473,5.01e-58,48;CL:0000234,5.01e-58,48;CL:0002009,2.19e-56,61;CL:0000839,1.87e-51,66;CL:0000557,1.48e-50,67;CL:0000766,1.97e-46,72;CL:0000860,3.26e-46,42;CL:0002057,3.26e-46,42;CL:0000763,6.13e-28,108;CL:0000049,6.13e-28,108;CL:0002087,1.10e-25,115;CL:0002031,3.10e-24,120;CL:0000738,2.56e-20,136;CL:0002032,9.00e-16,161;CL:0000837,9.00e-16,161;CL:0000037,9.56e-15,168;CL:0000235,1.01e-13,6;CL:0000988,1.50e-13,177;CL:0002619,2.72e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.20e-35;42!CL:0000049;8.56e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.40e-15!80;UBERON:0004765!7.75e-13!101;UBERON:0001434!7.75e-13!101;UBERON:0001474!1.60e-12!86;UBERON:0002405!1.17e-10!115;UBERON:0000062!3.79e-10!511;UBERON:0002204!7.39e-10!167;UBERON:0002390!1.93e-09!102;UBERON:0003061!1.93e-09!102;UBERON:0000467!8.72e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0002193!1.83e-07!112;UBERON:0000926!1.93e-07!448;UBERON:0004120!1.93e-07!448;UBERON:0006603!1.93e-07!448;UBERON:0000923!5.87e-07!604;UBERON:0005291!5.87e-07!604;UBERON:0006598!5.87e-07!604;UBERON:0002532!5.87e-07!604;UBERON:0002050!7.41e-07!605;UBERON:0005423!7.41e-07!605 | |ontology_enrichment_uberon=UBERON:0002371!7.40e-15!80;UBERON:0004765!7.75e-13!101;UBERON:0001434!7.75e-13!101;UBERON:0001474!1.60e-12!86;UBERON:0002405!1.17e-10!115;UBERON:0000062!3.79e-10!511;UBERON:0002204!7.39e-10!167;UBERON:0002390!1.93e-09!102;UBERON:0003061!1.93e-09!102;UBERON:0000467!8.72e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0002193!1.83e-07!112;UBERON:0000926!1.93e-07!448;UBERON:0004120!1.93e-07!448;UBERON:0006603!1.93e-07!448;UBERON:0000923!5.87e-07!604;UBERON:0005291!5.87e-07!604;UBERON:0006598!5.87e-07!604;UBERON:0002532!5.87e-07!604;UBERON:0002050!7.41e-07!605;UBERON:0005423!7.41e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0002394;4.81e-07;4!UBERON:0003928;4.81e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.09e-46,76;UBERON:0001474,4.54e-42,82;UBERON:0004765,7.48e-40,90;UBERON:0002405,5.33e-36,93;UBERON:0001434,6.44e-35,100;UBERON:0002390,1.09e-33,98;UBERON:0003061,1.09e-33,98;UBERON:0002193,1.05e-29,108;UBERON:0002204,1.81e-19,167;UBERON:0003081,3.06e-14,203;UBERON:0000926,6.18e-09,315;UBERON:0004120,6.18e-09,315;UBERON:0006603,6.18e-09,315;UBERON:0002384,4.17e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.369363174230364,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,1.10799081706375,0.802177789880567,0.217010870715852,25.5263640633514,11.6601719766833,27.3030101692238,0.872389432677388,2.64513160582167,0.485168122375632,9.29716147622739,13.5685403047203,18.8920886246013,3.74000110018796,3.84241059793651,2.36482229888585,15.5135556331478,16.7826017731795,8.12558919566051,2.25890807451126,8.46009065179322,4.26974620445661,5.50951006267625,8.66508373105453,3.19668562899521,0,0,0,4.35313857942876,13.6172453925874,8.71951148593805,4.01997864410789,7.30076085788282,5.86409880703815,4.84319602106695,9.20694089968912,6.64571013625857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0.354668382198357,1.12135520028461,0,0,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0.352303495931295,0.323745888736263,0,0.204154171254893,0.368502951935304,0.413303124703062,0,0,0,0,0,0.250237039743928,0.831192346452549,0,0,0,0,0.179389635688862,0,0.211931901159562,0.900273288253207,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.169560592310488,1.15956511897978,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,3.12899064659632,0,0,0,0,0.236613600079688,0.674338760312407,1.20505514941741,0.220587945464788,0.435758888184812,0.71181185733329,0.808987848960987,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.514703430895577,0.658501712451753,1.1240175325762,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,6.89407617044712,0.468008530278475,4.31030370637312,1.87467667973554,0.503946384596579,0.283550194484773,1.34337784054272,0.871901815541886,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.4400297149257,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.599837947092342,6.08118903205952,7.5338563714819,6.32501818449095,0,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0.255225424989168,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0,0,0.606547444719948,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.556812347790485,0,0,0,0,0,1.61158997199083,0,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0,1.53403023753232,0,0.622079175323615,1.07842021376792,0.895105873378046,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,6.31228986788641,0,1.20990716048664,0,0,0.300646838828985,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0,0.0979923974143777,2.08942095792966,0.17472666824203,0.687944129886466,0.0967563312890851,0.365446585430928,0.328461828212837,0,0,0,0.822251547880505,1.39100228192093,0,0,0.561111741760736,0,0,0,0,0,0.14405479798815,0,0,0.271808412147228,0.836822770498666,0.203996435272644,1.44475294950759,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0.528001682597033,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,1.02232813071253,0,0,0,0.258565912723101,0,0.171086837884329,0,1.28144895081234,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,1.17632909849086,0.468334905806882,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0.889811221596536,0.228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| ||
|short_description=p4@PAX8 | |short_description=p4@PAX8 | ||
}} | }} |
Latest revision as of 13:08, 16 September 2015
Short description: | p4@PAX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAX8_5end |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | -4bp_to_ENST00000497038_5end |
EntrezGene: | PAX8 |
HGNC: | 8622 |
UniProt: | G3V463 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.37e-58 | 59 |
monocyte | 1.37e-58 | 59 |
monoblast | 1.37e-58 | 59 |
promonocyte | 1.37e-58 | 59 |
defensive cell | 5.01e-58 | 48 |
phagocyte | 5.01e-58 | 48 |
macrophage dendritic cell progenitor | 2.19e-56 | 61 |
myeloid lineage restricted progenitor cell | 1.87e-51 | 66 |
granulocyte monocyte progenitor cell | 1.48e-50 | 67 |
myeloid leukocyte | 1.97e-46 | 72 |
classical monocyte | 3.26e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.26e-46 | 42 |
myeloid cell | 6.13e-28 | 108 |
common myeloid progenitor | 6.13e-28 | 108 |
nongranular leukocyte | 1.10e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 3.10e-24 | 120 |
leukocyte | 2.56e-20 | 136 |
hematopoietic oligopotent progenitor cell | 9.00e-16 | 161 |
hematopoietic multipotent progenitor cell | 9.00e-16 | 161 |
hematopoietic stem cell | 9.56e-15 | 168 |
macrophage | 1.01e-13 | 6 |
hematopoietic cell | 1.50e-13 | 177 |
adult endothelial progenitor cell | 2.72e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.09e-46 | 76 |
bone element | 4.54e-42 | 82 |
skeletal element | 7.48e-40 | 90 |
immune system | 5.33e-36 | 93 |
skeletal system | 6.44e-35 | 100 |
hematopoietic system | 1.09e-33 | 98 |
blood island | 1.09e-33 | 98 |
hemolymphoid system | 1.05e-29 | 108 |
musculoskeletal system | 1.81e-19 | 167 |
lateral plate mesoderm | 3.06e-14 | 203 |
mesoderm | 6.18e-09 | 315 |
mesoderm-derived structure | 6.18e-09 | 315 |
presumptive mesoderm | 6.18e-09 | 315 |
connective tissue | 4.17e-07 | 371 |