FFCP PHASE1:Hg19::chr4:16228083..16228108,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:16228083..16228108,-
|short_description=p1@TAPT1
|description=CAGE_peak_1_at_TAPT1_5end
|association_with_transcript=0bp_to_ENST00000399920,ENST00000505603...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=202018 | |EntrezGene=202018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26887 | |HGNC=26887 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJJ3,D6RBK3 | |UniProt=B4DJJ3,D6RBK3 | ||
|association_with_transcript=0bp_to_ENST00000399920,ENST00000505603_5end | |||
|cluster_id=chr4:16228083..16228108,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_TAPT1_5end | |||
|id=chr4:16228083..16228108,- | |||
|ontology_enrichment_celltype=CL:0000037!6.20e-32!172;CL:0000566!6.20e-32!172;CL:0000738!7.16e-30!140;CL:0000988!1.59e-28!182;CL:0002032!1.70e-28!165;CL:0000837!1.70e-28!165;CL:0002031!1.14e-23!124;CL:0002087!1.24e-21!119;CL:0000763!2.06e-14!112;CL:0000049!2.06e-14!112;CL:0000542!3.45e-14!53;CL:0000051!3.45e-14!53;CL:0000838!4.60e-14!52;CL:0000766!2.93e-12!76;CL:0000557!3.26e-10!71;CL:0000236!1.05e-09!14;CL:0000839!1.62e-09!70;CL:0000791!2.35e-08!18;CL:0000789!2.35e-08!18;CL:0002420!2.35e-08!18;CL:0002419!2.35e-08!18;CL:0000790!2.35e-08!18;CL:0002009!2.74e-08!65;CL:0000084!9.68e-08!25;CL:0000827!9.68e-08!25;CL:0002194!1.78e-07!63;CL:0000576!1.78e-07!63;CL:0000040!1.78e-07!63;CL:0000559!1.78e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.94e-10;13!CL:0000542;1.32e-09;53!CL:0000791;2.51e-08;18!CL:0000789;2.51e-08;18!CL:0002419;2.51e-08;18!CL:0000084;1.09e-07;25!CL:0000738;3.48e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.58e-33,168;CL:0000738,1.21e-31,136;CL:0000988,1.02e-30,177;CL:0002032,5.16e-30,161;CL:0000837,5.16e-30,161;CL:0002031,2.61e-25,120;CL:0002087,3.23e-23,115;CL:0000763,1.21e-15,108;CL:0000049,1.21e-15,108;CL:0000542,3.45e-14,53;CL:0000051,3.45e-14,53;CL:0000838,4.60e-14,52;CL:0000766,1.05e-13,72;CL:0000557,1.57e-11,67;CL:0000839,8.88e-11,66;CL:0000236,1.05e-09,14;CL:0002009,1.75e-09,61;CL:0002194,1.33e-08,59;CL:0000576,1.33e-08,59;CL:0000040,1.33e-08,59;CL:0000559,1.33e-08,59;CL:0000791,2.35e-08,18;CL:0000789,2.35e-08,18;CL:0002420,2.35e-08,18;CL:0002419,2.35e-08,18;CL:0000790,2.35e-08,18;CL:0000084,9.68e-08,25;CL:0000827,9.68e-08,25;CL:0000473,6.59e-07,48;CL:0000234,6.59e-07,48;CL:0000134,9.15e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.32e-09;53!CL:0000790;2.51e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.82e-30!115;UBERON:0002390!3.48e-13!102;UBERON:0003061!3.48e-13!102;UBERON:0001049!1.32e-12!57;UBERON:0005068!1.32e-12!57;UBERON:0006241!1.32e-12!57;UBERON:0007135!1.32e-12!57;UBERON:0003080!7.67e-12!42;UBERON:0002780!1.25e-11!41;UBERON:0001890!1.25e-11!41;UBERON:0006240!1.25e-11!41;UBERON:0002193!7.43e-11!112;UBERON:0002616!8.78e-10!59;UBERON:0000955!4.23e-09!69;UBERON:0006238!4.23e-09!69;UBERON:0001893!4.40e-09!34;UBERON:0002020!6.14e-09!34;UBERON:0003528!6.14e-09!34;UBERON:0002791!8.60e-09!33;UBERON:0001017!1.20e-08!82;UBERON:0001869!3.51e-08!32;UBERON:0002371!3.96e-08!80;UBERON:0005743!6.81e-08!86;UBERON:0001474!1.05e-07!86;UBERON:0000073!1.09e-07!94;UBERON:0001016!1.09e-07!94;UBERON:0002619!1.98e-07!22;UBERON:0002405!3.23e-07!115;UBERON:0001950!8.78e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.29e-09;41!UBERON:0001890;7.29e-09;41!UBERON:0007023;1.19e-08;114!UBERON:0001893;1.20e-07;34!UBERON:0003528;1.22e-07;34!UBERON:0002020;1.22e-07;34!UBERON:0000073;1.33e-07;53!UBERON:0002616;1.33e-07;53!UBERON:0002791;1.60e-07;32!UBERON:0001869;1.92e-07;32!UBERON:0002619;2.01e-07;22!UBERON:0001950;9.00e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.01e-29,114;UBERON:0002390,2.04e-14,98;UBERON:0003061,2.04e-14,98;UBERON:0001049,2.16e-12,56;UBERON:0005068,2.16e-12,56;UBERON:0006241,2.16e-12,56;UBERON:0007135,2.16e-12,56;UBERON:0002193,7.44e-12,108;UBERON:0000073,1.10e-11,53;UBERON:0002616,1.10e-11,53;UBERON:0002780,1.25e-11,41;UBERON:0001890,1.25e-11,41;UBERON:0003080,1.25e-11,41;UBERON:0006240,1.25e-11,41;UBERON:0002371,3.83e-09,76;UBERON:0001893,4.40e-09,34;UBERON:0003528,6.14e-09,34;UBERON:0002020,6.14e-09,34;UBERON:0000955,6.69e-09,68;UBERON:0006238,6.69e-09,68;UBERON:0001474,1.25e-08,82;UBERON:0001017,1.85e-08,81;UBERON:0002791,2.45e-08,32;UBERON:0001016,3.43e-08,89;UBERON:0001869,3.51e-08,32;UBERON:0002405,4.18e-08,93;UBERON:0002619,1.98e-07,22;UBERON:0001950,8.78e-07,20 | |||
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| ||
|short_description=p1@TAPT1 | |||
}} | }} |
Latest revision as of 12:54, 16 September 2015
Short description: | p1@TAPT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAPT1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000399920, ENST00000505603_5end |
EntrezGene: | TAPT1 |
HGNC: | 26887 |
UniProt: | B4DJJ3D6RBK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.01e-29 | 114 |
hematopoietic system | 2.04e-14 | 98 |
blood island | 2.04e-14 | 98 |
neural tube | 2.16e-12 | 56 |
neural rod | 2.16e-12 | 56 |
future spinal cord | 2.16e-12 | 56 |
neural keel | 2.16e-12 | 56 |
hemolymphoid system | 7.44e-12 | 108 |
regional part of nervous system | 1.10e-11 | 53 |
regional part of brain | 1.10e-11 | 53 |
regional part of forebrain | 1.25e-11 | 41 |
forebrain | 1.25e-11 | 41 |
anterior neural tube | 1.25e-11 | 41 |
future forebrain | 1.25e-11 | 41 |
bone marrow | 3.83e-09 | 76 |
telencephalon | 4.40e-09 | 34 |
brain grey matter | 6.14e-09 | 34 |
gray matter | 6.14e-09 | 34 |
brain | 6.69e-09 | 68 |
future brain | 6.69e-09 | 68 |
bone element | 1.25e-08 | 82 |
central nervous system | 1.85e-08 | 81 |
regional part of telencephalon | 2.45e-08 | 32 |
nervous system | 3.43e-08 | 89 |
cerebral hemisphere | 3.51e-08 | 32 |
immune system | 4.18e-08 | 93 |
regional part of cerebral cortex | 1.98e-07 | 22 |
neocortex | 8.78e-07 | 20 |