FFCP PHASE1:Hg19::chr20:44462801..44462825,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90203 | |EntrezGene=90203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16154 | |HGNC=16154 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000372545,uc010zxd.1_5end | |association_with_transcript=0bp_to_ENST00000372545,uc010zxd.1_5end | ||
|cluster_id=chr20:44462801..44462825,+ | |||
|coexpression_cluster_id=C4043 | |coexpression_cluster_id=C4043 | ||
|description=CAGE_peak_2_at_SNX21_5end | |description=CAGE_peak_2_at_SNX21_5end | ||
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|ontology_enrichment_celltype=CL:0000055!9.46e-24!180;CL:0000057!1.37e-17!75;CL:0000136!8.24e-10!15;CL:0002620!2.16e-08!23;CL:0000680!7.40e-07!57;CL:0000056!7.40e-07!57;CL:0000355!7.40e-07!57;CL:0000183!9.43e-07!59 | |ontology_enrichment_celltype=CL:0000055!9.46e-24!180;CL:0000057!1.37e-17!75;CL:0000136!8.24e-10!15;CL:0002620!2.16e-08!23;CL:0000680!7.40e-07!57;CL:0000056!7.40e-07!57;CL:0000355!7.40e-07!57;CL:0000183!9.43e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.45e-09;13!CL:0002620;1.21e-08;23!CL:0000057;2.80e-07;73 | |ontology_enrichment_celltype_v019=CL:0000136;8.45e-09;13!CL:0002620;1.21e-08;23!CL:0000057;2.80e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.08e-18,76;CL:0000136,4.18e-10,15;CL:0002620,1.23e-08,23;CL:0000680,2.04e-07,58;CL:0000056,2.04e-07,58;CL:0000355,2.04e-07,58;CL:0000187,6.91e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001013;4.90e-08;14!UBERON:0002384;7.54e-07;198 | |ontology_enrichment_uberon_v019=UBERON:0001013;4.90e-08;14!UBERON:0002384;7.54e-07;198 | ||
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| ||
|short_description=p2@SNX21 | |short_description=p2@SNX21 | ||
}} | }} |
Latest revision as of 12:46, 16 September 2015
Short description: | p2@SNX21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNX21_5end |
Coexpression cluster: | C4043_Mesenchymal_Synoviocyte_Adipocyte_mature_tenocyte_Smooth_Multipotent |
Association with transcript: | 0bp_to_ENST00000372545, uc010zxd.1_5end |
EntrezGene: | SNX21 |
HGNC: | 16154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.08e-18 | 76 |
fat cell | 4.18e-10 | 15 |
skin fibroblast | 1.23e-08 | 23 |
muscle precursor cell | 2.04e-07 | 58 |
myoblast | 2.04e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.04e-07 | 58 |
muscle cell | 6.91e-07 | 55 |