FFCP PHASE1:Hg19::chr5:155753745..155753782,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:155753745..155753782,+
|short_description=p6@SGCD
|description=CAGE_peak_6_at_SGCD_5end
|association_with_transcript=0bp_to_ENST00000337851,ENST00000435422...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6444 | |EntrezGene=6444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10807 | |HGNC=10807 | ||
|TSSclassifier=strong | |||
|UniProt=Q92629 | |UniProt=Q92629 | ||
|association_with_transcript=0bp_to_ENST00000337851,ENST00000435422,ENST00000447401,NM_000337,NM_001128209,NM_172244,uc003lwb.2,uc003lwc.3,uc003lwd.3_5end | |||
|cluster_id=chr5:155753745..155753782,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_6_at_SGCD_5end | |||
|id=chr5:155753745..155753782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.67e-23;1!UBERON:0006238;4.90e-09;10!UBERON:0003056;8.31e-09;3!UBERON:0006215;1.26e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.74e-12;2!DOID:3093;2.33e-08;11!DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.62e-12,2;DOID:3093,2.20e-08,11;DOID:5409,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.14e-32!57;UBERON:0005068!4.14e-32!57;UBERON:0006241!4.14e-32!57;UBERON:0007135!4.14e-32!57;UBERON:0005743!1.96e-29!86;UBERON:0001017!2.11e-29!82;UBERON:0000073!7.87e-29!94;UBERON:0001016!7.87e-29!94;UBERON:0000955!1.71e-28!69;UBERON:0006238!1.71e-28!69;UBERON:0007023!3.82e-26!115;UBERON:0003075!4.98e-26!86;UBERON:0007284!4.98e-26!86;UBERON:0002346!2.11e-24!90;UBERON:0002616!2.22e-24!59;UBERON:0001893!1.53e-21!34;UBERON:0002020!1.70e-21!34;UBERON:0003528!1.70e-21!34;UBERON:0002780!7.77e-21!41;UBERON:0001890!7.77e-21!41;UBERON:0006240!7.77e-21!41;UBERON:0003080!3.36e-20!42;UBERON:0002791!5.11e-20!33;UBERON:0004121!7.39e-20!169;UBERON:0000153!2.56e-19!129;UBERON:0007811!2.56e-19!129;UBERON:0000924!4.30e-19!173;UBERON:0006601!4.30e-19!173;UBERON:0001869!1.40e-18!32;UBERON:0000033!1.95e-18!123;UBERON:0001950!6.72e-17!20;UBERON:0003056!1.92e-16!61;UBERON:0002619!4.07e-15!22;UBERON:0003076!1.54e-13!15;UBERON:0003057!1.54e-13!15;UBERON:0000956!5.79e-13!25;UBERON:0000203!5.79e-13!25;UBERON:0002308!8.38e-11!9;UBERON:0000125!8.38e-11!9;UBERON:0002298!6.69e-10!8;UBERON:0000475!1.95e-09!365;UBERON:0000200!6.88e-09!6;UBERON:0004733!1.64e-08!12;UBERON:0002028!1.64e-08!12;UBERON:0007277!1.64e-08!12;UBERON:0000062!8.17e-08!511;UBERON:0002420!8.19e-08!9;UBERON:0007245!8.19e-08!9;UBERON:0010009!8.19e-08!9;UBERON:0010011!8.19e-08!9;UBERON:0000454!8.19e-08!9;UBERON:0004732!9.14e-08!13;UBERON:0002240!1.03e-07!3;UBERON:0000988!1.62e-07!3;UBERON:0001872!1.69e-07!5;UBERON:0009663!2.05e-07!7;UBERON:0002771!3.33e-07!3;UBERON:0006331!3.96e-07!3;UBERON:0000064!4.09e-07!219;UBERON:0000025!9.29e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000020;2.63e-09;23!UBERON:0001032;6.05e-09;24!UBERON:0004456;6.05e-09;24!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,6.22e-09,24;UBERON:0001032,6.22e-09,24;UBERON:0004456,6.22e-09,24;UBERON:0001723,1.40e-08,3;UBERON:0001033,1.40e-08,3;UBERON:0010056,1.40e-08,3 | |||
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| ||
|short_description=p6@SGCD | |||
}} | }} |
Latest revision as of 12:41, 16 September 2015
Short description: | p6@SGCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SGCD_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000337851, ENST00000435422, ENST00000447401, NM_000337, NM_001128209, NM_172244, uc003lwb.2, uc003lwc.3, uc003lwd.3_5end |
EntrezGene: | SGCD |
HGNC: | 10807 |
UniProt: | Q92629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sense organ | 6.22e-09 | 24 |
sensory system | 6.22e-09 | 24 |
entire sense organ system | 6.22e-09 | 24 |
tongue | 1.40e-08 | 3 |
gustatory system | 1.40e-08 | 3 |
future tongue | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.62e-12 | 2 |
nervous system cancer | 2.20e-08 | 11 |
lung small cell carcinoma | 6.87e-07 | 4 |