FFCP PHASE1:Hg19::chr7:134654295..134654363,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC015839_5end | |association_with_transcript=0bp_to_BC015839_5end | ||
|cluster_id=chr7:134654295..134654363,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_21_at_CALD1_5end | |description=CAGE_peak_21_at_CALD1_5end | ||
|id=chr7:134654295..134654363,+ | |id=chr7:134654295..134654363,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.28e-16!180;CL:0000057!1.25e-09!75 | |ontology_enrichment_celltype=CL:0000055!8.28e-16!180;CL:0000057!1.25e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.58e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.68e-10,76;CL:0002334,1.02e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;4.93e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.58e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.42e-11!365;UBERON:0000468!1.52e-09!659;UBERON:0000914!1.14e-08!83;UBERON:0002329!1.14e-08!83;UBERON:0003077!1.14e-08!83;UBERON:0003059!1.14e-08!83;UBERON:0007282!1.14e-08!83;UBERON:0009618!1.14e-08!83;UBERON:0007285!1.14e-08!83;UBERON:0000481!2.43e-08!347;UBERON:0005256!8.40e-08!143;UBERON:0003102!1.66e-07!95;UBERON:0000486!3.33e-07!82;UBERON:0002385!3.45e-07!63;UBERON:0001015!3.45e-07!63;UBERON:0000383!3.45e-07!63;UBERON:0001134!7.11e-07!61;UBERON:0002036!7.11e-07!61;UBERON:0003082!7.11e-07!61;UBERON:0004290!7.33e-07!70;UBERON:0000467!9.38e-07!625 | |ontology_enrichment_uberon=UBERON:0000475!2.42e-11!365;UBERON:0000468!1.52e-09!659;UBERON:0000914!1.14e-08!83;UBERON:0002329!1.14e-08!83;UBERON:0003077!1.14e-08!83;UBERON:0003059!1.14e-08!83;UBERON:0007282!1.14e-08!83;UBERON:0009618!1.14e-08!83;UBERON:0007285!1.14e-08!83;UBERON:0000481!2.43e-08!347;UBERON:0005256!8.40e-08!143;UBERON:0003102!1.66e-07!95;UBERON:0000486!3.33e-07!82;UBERON:0002385!3.45e-07!63;UBERON:0001015!3.45e-07!63;UBERON:0000383!3.45e-07!63;UBERON:0001134!7.11e-07!61;UBERON:0002036!7.11e-07!61;UBERON:0003082!7.11e-07!61;UBERON:0004290!7.33e-07!70;UBERON:0000467!9.38e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.20e-08;6!UBERON:0002358;7.20e-08;6!UBERON:0003684;7.20e-08;6!UBERON:0001178;7.20e-08;6!UBERON:0004457;2.15e-07;9!UBERON:0000042;2.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.57e-08,6;UBERON:0002358,7.57e-08,6;UBERON:0003684,7.57e-08,6;UBERON:0001178,7.57e-08,6 | |||
|phase1_expression=7.26713517082227,6.63711624062048,4.79244973926302,20.0146596706261,6.25745532198203,14.8297549097063,2.53299878168311,1.89515962028049,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.866364470720326,0.662794751455832,9.41255205032485,4.82155622419182,2.19093027116212,4.39139518911456,0,0,0.626909442956176,0,1.36874425072884,1.12988375635323,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,1.34140171940727,0.639312809217652,1.80719576192283,4.01070328508712,1.73815822752988,0,0.486634870302636,0.756278537312543,0.665188192387692,1.14185221401064,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0.735326160691737,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,24.8485975847659,1.2663051166458,2.78059279707759,1.43418310374407,0.354668382198357,1.68203280042692,1.06748995729705,1.48000529050296,0,0.404132016209064,0.653847612453835,0,3.45705554687999,0.234321431833797,0.936480230490962,0,1.04614076386261,0.117434498643765,0.161872944368132,0.421352420106746,0.408308342509787,0.491337269247072,0.309977343527296,2.37600571456411,8.65434252474949,0,0,0.168336113954066,0.375355559615893,0,2.19488810440419,10.1140972613676,4.95785594391769,0.794025282120147,19.553470290086,3.63047560991565,4.02670612203168,2.10063767259082,1.33968288009971,16.4889945629203,5.21127197728451,2.19409231913646,0.974370051611986,7.82544700156755,2.66944706062668,0.969876340912871,7.10019185033229,1.30977727695932,0.847802961552438,0.773043412653187,1.36373060295417,0.573609190778008,0.365921118388786,0.132529768321485,0.69716365721711,0.518305275076852,0.756962552626885,0,0,7.07565032012174,1.38134921352481,2.78620756819187,0.721879481669586,0.354920400119532,0,0.723033089650446,0.992645754591546,0.653638332277218,0.474541238222193,0.539325232640658,0.196221465125346,0,0,0,0,0,5.07020139287323,2.94848165003288,2.36315962672562,0,0.122988438543114,0.343135620597051,0.658501712451753,0,1.00528972411631,0,0.325808305310325,0,2.88662684050547,0.231860809950154,1.17408694235822,0.288732895522148,1.85194205030644,2.47330397904978,0,0,0,0,0,1.87467667973554,1.51183915378974,0.425325291727159,0.626909658919938,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0.857479297891735,0.112131084345361,0,0.36669142910475,3.10252117818667,0,0.845302752556,7.71220538096124,5.2003718455683,0,0,0,1.14382394926518,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.301439377059586,0.871533458600294,3.09916272664377,0,0,0,1.91699884393266,4.59447743336456,1.42636905040718,1.44781306667579,1.43833425785268,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.91381625495949,0,0,0,0.24538298343828,1.50051156317903,1.08506009479894,17.261581507057,15.3448930365559,10.8814666373415,15.2283839490527,0.601892199455438,0,1.03473071292505,5.97803038681893,0.921845842708516,1.04260337361699,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,6.94701861892575,6.29194090481056,6.73584226639377,6.27881831352935,11.7692667285342,12.2248980069142,1.48418066444991,1.85051632563187,2.13074070375753,0.657017248110473,1.55776328755086,0.348631135379878,0,1.20303882181971,0.276242966807689,0.34444334449382,0.728364672026868,1.44236856455367,0,0.385076685522074,0,0,0.316654886678627,0,0,2.37507507712353,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.515205058238611,0.640986253728404,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0.154048617114644,1.38153307253517,0.413509717453592,0.644521469209642,0.435050081742686,0.767039646744908,0.534192213880424,0.495854746082934,1.15314040419064,1.14851441245126,1.2138933702666,3.71876439437829,2.83331112147576,0,0,0.532306030317022,0,0.55597265731176,1.71749864090389,1.86079184679834,1.89827654831236,2.09693213316207,0.255897791311334,3.42351190427136,0,0,3.41757669408298,1.92175920815238,1.29593642580255,0.202182481573316,3.17020642346017,0.421258456238981,0.48763373908959,0.731140468893853,0,1.50149902548784,1.27264888758341,0,0,0.66343897524122,3.06915619677634,0.578775534266688,0.655894752046633,0.608731130888112,0,0.281695602532241,0.573645408816206,1.27723753317057,1.426684205925,0.709522128141196,1.68886108238131,1.31717957183961,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,1.53580351049616,0,0.562677665642051,0.333926115068718,0,0.211125408127993,8.76691148304707,0.552567831062295,0,0.409074730008619,0,13.0636626817959,0.269605053441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| ||
|short_description=p21@CALD1 | |short_description=p21@CALD1 | ||
}} | }} |
Latest revision as of 12:40, 16 September 2015
Short description: | p21@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | 0bp_to_BC015839_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.68e-10 | 76 |
preadipocyte | 1.02e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.57e-08 | 6 |
peritoneum | 7.57e-08 | 6 |
abdominal cavity | 7.57e-08 | 6 |
visceral peritoneum | 7.57e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.58e-07 | 14 |