FFCP PHASE1:Hg19::chr1:235667548..235667557,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:235667548..235667557,- to FFCP PHASE1:Hg19::chr1:235667548..235667557,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148789 | |EntrezGene=148789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28596 | |HGNC=28596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=164bp_to_ENST00000313984_5end | |||
|cluster_id=chr1:235667548..235667557,- | |||
|description=CAGE_peak_4_at_B3GALNT2_5end | |||
|id=chr1:235667548..235667557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.56e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.31e-08;2!DOID:962;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.87e-08,2;DOID:962,2.87e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.73e-23;10!UBERON:0000478;5.72e-10;24!UBERON:0000178;2.67e-09;15!UBERON:0000179;2.67e-09;15!UBERON:0000463;2.67e-09;15!UBERON:0000922;1.09e-08;49!UBERON:0003714;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.78e-23,10;UBERON:0000358,1.78e-23,10;UBERON:0000307,1.78e-23,10;UBERON:0000091,1.78e-23,10;UBERON:0000087,1.78e-23,10;UBERON:0007010,1.78e-23,10;UBERON:0007806,1.78e-23,10;UBERON:0008780,1.78e-23,10;UBERON:0005728,1.78e-23,10;UBERON:0000478,5.79e-10,24;UBERON:0000178,2.71e-09,15;UBERON:0000179,2.71e-09,15;UBERON:0000463,2.71e-09,15;UBERON:0003714,2.87e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0.623912584592421,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0.40101294060657,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.170453254832202,0,0,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0.144269212976445,0.142283686696828,0.318852545457645,0.399158742865633,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0.556812347790485,0,0,0.66614393599564,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0.438770794307945,0.10893846351899,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,3.85477467284809,3.70691816839509,2.29728288912002,0.134802265961354,0,0.468528891450678,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0,0,1.20258735531594,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.176512253383001,0,0,0,0.126621591911757,0,0,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,1.32506888912221,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0.610131324509816,0.1251909307065,0,0,0.124192805882767,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0.327628914576042,0,0.212574920101683,0.371807292777007,1.11728983594649,0.318004350653419,0.157723490002507,0,0.352675943690684,0.6124909547064,0.192687675289379,0,0.478901577171454,0,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0.231051332300676,0,0,0.397832444232549,0,0,1.56302802246618,0.261906694481422,0,0.295712172434091,0.202612753855184,0,0.826747186004736,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.118193840883968,0,0.156986185701028,0.314231179832004,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0.45178432815584,0.219881033490858,0,0.0771741581079447,0,0.940634592723046,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0.0802413666891683,0.730336388246517,0.917458566809082,0,0.315543124386369,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.18378979906969,0,0.0757786982182394,0.267964130156178,0,0.20686599172379,0,0,0.0645889098360061,0.124149428591716,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,4.69281884806909,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0.201504196455281,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,2.6487785964879,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,0.414656231081544,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,0.431255149719035,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0.623912584592421,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0.40101294060657,0.184161977871793,0.114814448164607,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.170453254832202,0,0,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0.144269212976445,0.142283686696828,0.318852545457645,0.399158742865633,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0.556812347790485,0,0,0.66614393599564,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0.438770794307945,0.10893846351899,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,3.85477467284809,3.70691816839509,2.29728288912002,0.134802265961354,0,0.468528891450678,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0,0,1.20258735531594,0,0,0,0,0,0,0,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.176512253383001,0,0,0,0.126621591911757,0,0,0.213452994739353,0.39961921916426,0,0,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0,1.32506888912221,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0.610131324509816,0.1251909307065,0,0,0.124192805882767,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0.327628914576042,0,0.212574920101683,0.371807292777007,1.11728983594649,0.318004350653419,0.157723490002507,0,0.352675943690684,0.6124909547064,0.192687675289379,0,0.478901577171454,0,0.252071696221718,0.138314504928436,0.322951291263702,0,0,0,0,0.231051332300676,0,0,0.397832444232549,0,0,1.56302802246618,0.261906694481422,0,0.295712172434091,0.202612753855184,0,0.826747186004736,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.118193840883968,0,0.156986185701028,0.314231179832004,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0.45178432815584,0.219881033490858,0,0.0771741581079447,0,0.940634592723046,0.245148321753905,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0.0802413666891683,0.730336388246517,0.917458566809082,0,0.315543124386369,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.18378979906969,0,0.0757786982182394,0.267964130156178,0,0.20686599172379,0,0,0.0645889098360061,0.124149428591716,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,4.69281884806909,0,0,0,0,0.320568492303233 | ||
|short_description=p4@B3GALNT2 | |||
}} | }} |
Latest revision as of 12:39, 16 September 2015
Short description: | p4@B3GALNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_B3GALNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000313984_5end |
EntrezGene: | B3GALNT2 |
HGNC: | 28596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.78e-23 | 10 |
blastocyst | 1.78e-23 | 10 |
blastula | 1.78e-23 | 10 |
bilaminar disc | 1.78e-23 | 10 |
inner cell mass | 1.78e-23 | 10 |
cleaving embryo | 1.78e-23 | 10 |
connecting stalk | 1.78e-23 | 10 |
inner cell mass derived epiblast | 1.78e-23 | 10 |
extraembryonic mesoderm | 1.78e-23 | 10 |
extraembryonic structure | 5.79e-10 | 24 |
blood | 2.71e-09 | 15 |
haemolymphatic fluid | 2.71e-09 | 15 |
organism substance | 2.71e-09 | 15 |
neural tissue | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.87e-08 | 2 |
neurofibroma | 2.87e-08 | 2 |