FFCP PHASE1:Hg19::chrX:80065146..80065250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254065 | |EntrezGene=254065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17342 | |HGNC=17342 | ||
|TSSclassifier=strong | |||
|UniProt=Q6RI45 | |UniProt=Q6RI45 | ||
|association_with_transcript=0bp_to_ENST00000373275,ENST00000478415,NM_153252,uc004edt.2,uc004edu.2,uc004edv.2,uc004edw.2,uc004edx.2,uc004edy.2,uc004edz.2,uc004eea.2,uc004eeb.2_5end | |association_with_transcript=0bp_to_ENST00000373275,ENST00000478415,NM_153252,uc004edt.2,uc004edu.2,uc004edv.2,uc004edw.2,uc004edx.2,uc004edy.2,uc004edz.2,uc004eea.2,uc004eeb.2_5end | ||
|cluster_id=chrX:80065146..80065250,- | |||
|coexpression_cluster_id=C468 | |coexpression_cluster_id=C468 | ||
|description=CAGE_peak_1_at_BRWD3_5end | |description=CAGE_peak_1_at_BRWD3_5end | ||
|id=chrX:80065146..80065250,- | |id=chrX:80065146..80065250,- | ||
|ontology_enrichment_celltype=CL:0000738!4.44e-11!140;CL:0000037!8.66e-10!172;CL:0000566!8.66e-10!172;CL:0000791!8.88e-10!18;CL:0000789!8.88e-10!18;CL:0002420!8.88e-10!18;CL:0002419!8.88e-10!18;CL:0000790!8.88e-10!18;CL:0002032!2.28e-09!165;CL:0000837!2.28e-09!165;CL:0002031!4.24e-09!124;CL:0000988!1.44e-08!182;CL:0002087!2.51e-08!119;CL:0000084!4.93e-08!25;CL:0000827!4.93e-08!25;CL:0000625!5.14e-08!11;CL:0000838!1.03e-07!52;CL:0000542!2.76e-07!53;CL:0000051!2.76e-07!53 | |ontology_enrichment_celltype=CL:0000738!4.44e-11!140;CL:0000037!8.66e-10!172;CL:0000566!8.66e-10!172;CL:0000791!8.88e-10!18;CL:0000789!8.88e-10!18;CL:0002420!8.88e-10!18;CL:0002419!8.88e-10!18;CL:0000790!8.88e-10!18;CL:0002032!2.28e-09!165;CL:0000837!2.28e-09!165;CL:0002031!4.24e-09!124;CL:0000988!1.44e-08!182;CL:0002087!2.51e-08!119;CL:0000084!4.93e-08!25;CL:0000827!4.93e-08!25;CL:0000625!5.14e-08!11;CL:0000838!1.03e-07!52;CL:0000542!2.76e-07!53;CL:0000051!2.76e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.75e-10;18!CL:0000789;4.75e-10;18!CL:0002419;4.75e-10;18!CL:0000625;3.56e-08;11!CL:0000084;5.27e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.41e-11,136;CL:0000791,6.96e-10,18;CL:0000789,6.96e-10,18;CL:0002420,6.96e-10,18;CL:0002419,6.96e-10,18;CL:0000790,6.96e-10,18;CL:0000037,1.24e-09,168;CL:0002032,3.18e-09,161;CL:0000837,3.18e-09,161;CL:0002031,6.40e-09,120;CL:0000988,8.51e-09,177;CL:0000084,4.07e-08,25;CL:0000827,4.07e-08,25;CL:0002087,4.09e-08,115;CL:0000625,4.24e-08,11;CL:0000838,2.48e-07,52;CL:0000542,8.15e-07,53;CL:0000051,8.15e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;4.75e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.39e-14!115;UBERON:0002390!4.61e-07!102;UBERON:0003061!4.61e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!3.39e-14!115;UBERON:0002390!4.61e-07!102;UBERON:0003061!4.61e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.95e-14,114;UBERON:0002390,4.00e-07,98;UBERON:0003061,4.00e-07,98 | |||
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| ||
|short_description=p1@BRWD3 | |short_description=p1@BRWD3 | ||
}} | }} |
Latest revision as of 12:30, 16 September 2015
Short description: | p1@BRWD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BRWD3_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000373275, ENST00000478415, NM_153252, uc004edt.2, uc004edu.2, uc004edv.2, uc004edw.2, uc004edx.2, uc004edy.2, uc004edz.2, uc004eea.2, uc004eeb.2_5end |
EntrezGene: | BRWD3 |
HGNC: | 17342 |
UniProt: | Q6RI45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.41e-11 | 136 |
mature alpha-beta T cell | 6.96e-10 | 18 |
alpha-beta T cell | 6.96e-10 | 18 |
immature T cell | 6.96e-10 | 18 |
mature T cell | 6.96e-10 | 18 |
immature alpha-beta T cell | 6.96e-10 | 18 |
hematopoietic stem cell | 1.24e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.18e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.18e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 6.40e-09 | 120 |
hematopoietic cell | 8.51e-09 | 177 |
T cell | 4.07e-08 | 25 |
pro-T cell | 4.07e-08 | 25 |
nongranular leukocyte | 4.09e-08 | 115 |
CD8-positive, alpha-beta T cell | 4.24e-08 | 11 |
lymphoid lineage restricted progenitor cell | 2.48e-07 | 52 |
lymphocyte | 8.15e-07 | 53 |
common lymphoid progenitor | 8.15e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.95e-14 | 114 |
hematopoietic system | 4.00e-07 | 98 |
blood island | 4.00e-07 | 98 |