FFCP PHASE1:Hg19::chr14:90873274..90873290,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1442 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-398bp_to_BC042831_5end | |||
|cluster_id=chr14:90873274..90873290,+ | |||
|coexpression_cluster_id=C149 | |||
|description=CAGE_peak_43_at_CALM1_5end | |||
|id=chr14:90873274..90873290,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;1.33e-09;2!CL:1000398;1.33e-09;2!CL:0002615;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.22e-09,2;CL:1000398,1.22e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.14e-07;3!UBERON:0003057;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;8.14e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,9.12e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001869!2.09e-14!32;UBERON:0002020!2.02e-13!34;UBERON:0003528!2.02e-13!34;UBERON:0001893!4.20e-13!34;UBERON:0002780!5.76e-13!41;UBERON:0001890!5.76e-13!41;UBERON:0006240!5.76e-13!41;UBERON:0001049!6.69e-13!57;UBERON:0005068!6.69e-13!57;UBERON:0006241!6.69e-13!57;UBERON:0007135!6.69e-13!57;UBERON:0002619!1.23e-12!22;UBERON:0002791!1.24e-12!33;UBERON:0001950!1.31e-12!20;UBERON:0003080!1.88e-12!42;UBERON:0000956!7.30e-12!25;UBERON:0000203!7.30e-12!25;UBERON:0000073!3.00e-11!94;UBERON:0001016!3.00e-11!94;UBERON:0002616!5.46e-11!59;UBERON:0001017!6.76e-11!82;UBERON:0000955!1.56e-10!69;UBERON:0006238!1.56e-10!69;UBERON:0005743!2.16e-10!86;UBERON:0002346!1.93e-08!90;UBERON:0003075!5.71e-08!86;UBERON:0007284!5.71e-08!86;UBERON:0003056!7.76e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.25e-14;5!UBERON:0001950;5.26e-13;20!UBERON:0002619;6.65e-12;22!UBERON:0000956;1.45e-10;25!UBERON:0000203;1.45e-10;25!UBERON:0001281;1.33e-09;2!UBERON:0003497;1.33e-09;2!UBERON:0003909;1.33e-09;2!UBERON:0003835;1.33e-09;2!UBERON:0000922;2.39e-08;49!UBERON:0002791;3.23e-08;32!UBERON:0001869;4.13e-08;32!UBERON:0002240;8.14e-07;3!UBERON:0005174;8.14e-07;3!UBERON:0001280;8.14e-07;3!UBERON:0004647;8.14e-07;3!UBERON:0001137;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.72e-14,5;UBERON:0001950,4.94e-13,20;UBERON:0002619,6.29e-12,22;UBERON:0000956,1.38e-10,25;UBERON:0000203,1.38e-10,25;UBERON:0001281,1.22e-09,2;UBERON:0003497,1.22e-09,2;UBERON:0003909,1.22e-09,2;UBERON:0003835,1.22e-09,2;UBERON:0002791,2.12e-08,32;UBERON:0001869,2.12e-08,32;UBERON:0003528,6.21e-08,34;UBERON:0002020,6.21e-08,34;UBERON:0001893,6.21e-08,34;UBERON:0001049,2.49e-07,56;UBERON:0005068,2.49e-07,56;UBERON:0006241,2.49e-07,56;UBERON:0007135,2.49e-07,56;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3;UBERON:0002240,8.62e-07,3;UBERON:0005174,8.62e-07,3;UBERON:0001137,8.62e-07,3 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,1.94826728407911,0.222820913770347,0,0,0.270803863765016,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,0.226618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0.224170287987055,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0.561320188866147,0,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0.159426272728822,0,0,0,0,0.561594356226918,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.834912883456661,0,0,0.174919999992391,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.60298219312704,0,0.221158519862449,0,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,0,0.176915129006678,0,0,0.247127877893006,0,0,0,0.468528891450678,0.182454789215666,0,0,0.789168805698781,0,1.53036380815245,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.0979923974143777,0,0.34945333648406,0,0,0,0,0,0,0,0.274083849293502,0,0.253243183823515,0,0.0801588202515337,0,0,0.144090417154106,0,0.171594997861965,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0,0,0.858452096273142,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0.0846733320657845,0,0.408610218334727,0,0.137539436597234,0,0,0,0.425246896606173,0,0,0.0524545881349981,0,1.25501137532991,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.976210119215705,0.500763722825999,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0.344429959321631,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0.169732529954025,0,1.23935764259002,0,0.318004350653419,0.0788617450012534,0,0,0,0.321146125482298,0,0.478901577171454,8.2046545696302,1.76450187355203,0,0.807378228159255,0,0.0981477185010256,0,0.183428598521679,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.0634158101939068,1.09394961803644,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0.40781839786099,0.460409414939944,0,0.111231401892069,0,0.785577949580009,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0.0771741581079447,0,0.940634592723046,0,0,0,0,1.2679671827502,0,0,0,0,0,0.352894871715692,0.240724100067505,0,0.917458566809082,0,0,0.203974470572744,0,0.529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| |||
|short_description=p43@CALM1 | |||
}} |
Latest revision as of 12:27, 16 September 2015
Short description: | p43@CALM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_CALM1_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | -398bp_to_BC042831_5end |
EntrezGene: | CALM1 |
HGNC: | 1442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.22e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.22e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.72e-14 | 5 |
neocortex | 4.94e-13 | 20 |
regional part of cerebral cortex | 6.29e-12 | 22 |
cerebral cortex | 1.38e-10 | 25 |
pallium | 1.38e-10 | 25 |
hepatic sinusoid | 1.22e-09 | 2 |
abdomen blood vessel | 1.22e-09 | 2 |
sinusoid | 1.22e-09 | 2 |
abdominal segment blood vessel | 1.22e-09 | 2 |
regional part of telencephalon | 2.12e-08 | 32 |
cerebral hemisphere | 2.12e-08 | 32 |
brain grey matter | 6.21e-08 | 34 |
gray matter | 6.21e-08 | 34 |
telencephalon | 6.21e-08 | 34 |
neural tube | 2.49e-07 | 56 |
neural rod | 2.49e-07 | 56 |
future spinal cord | 2.49e-07 | 56 |
neural keel | 2.49e-07 | 56 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |
spinal cord | 8.62e-07 | 3 |
dorsal region element | 8.62e-07 | 3 |
dorsum | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 9.12e-07 | 3 |