FFCP PHASE1:Hg19::chr7:134625911..134625928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000472096_5end | |association_with_transcript=-4bp_to_ENST00000472096_5end | ||
|cluster_id=chr7:134625911..134625928,+ | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_34_at_CALD1_5end | |description=CAGE_peak_34_at_CALD1_5end | ||
|id=chr7:134625911..134625928,+ | |id=chr7:134625911..134625928,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-14!180;CL:0000057!5.76e-10!75;CL:0002334!6.13e-08!12 | |ontology_enrichment_celltype=CL:0000055!1.41e-14!180;CL:0000057!5.76e-10!75;CL:0002334!6.13e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.52e-08;12!CL:0002579;6.76e-08;3!CL:0000136;2.38e-07;13!CL:0002615;3.15e-07;3!CL:0002580;5.66e-07;3!CL:0000197;7.43e-07;6!CL:0000098;7.43e-07;6!CL:0002167;7.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.33e-10,76;CL:0000136,2.97e-10,15;CL:0002334,2.85e-08,12;CL:0002579,6.83e-08,3;CL:0002615,1.88e-07,3;CL:0002580,3.14e-07,3;CL:0000197,7.17e-07,6;CL:0000098,7.17e-07,6;CL:0002167,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.10e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.26e-08!365;UBERON:0003102!1.61e-07!95;UBERON:0005256!2.09e-07!143;UBERON:0002100!9.57e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.88e-13;6!UBERON:0002358;1.88e-13;6!UBERON:0003684;1.88e-13;6!UBERON:0001178;1.88e-13;6!UBERON:0004457;2.28e-11;9!UBERON:0000042;2.28e-11;9!UBERON:0006947;1.72e-07;3!UBERON:0004054;1.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.13e-13,6;UBERON:0002358,1.13e-13,6;UBERON:0003684,1.13e-13,6;UBERON:0001178,1.13e-13,6;UBERON:0004457,2.09e-08,12;UBERON:0000042,2.09e-08,12;UBERON:0006947,2.14e-07,3;UBERON:0004054,2.14e-07,3 | |||
|phase1_expression=1.81678379270557,3.8538094300377,2.81908808191942,5.00366491765652,1.78784437770915,3.48935409640147,2.53299878168311,0,0,0,0,0,0,0.37129905888014,0.331397375727916,3.36162573225888,3.01347264011988,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.572471974262113,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0,0.189069634328136,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,4.96971951695318,0.633152558322899,0.794455084879313,0,1.06400514659507,0.560677600142307,0,0.74000264525148,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.309977343527296,1.18800285728205,5.19260551484969,0,0,0,0.125118519871964,0,1.31693286264251,2.45190236639216,2.55404700141215,0.226864366320042,1.4351170855109,1.49490172172997,1.05965950579781,0.600182192168805,0.309157587715317,2.06112432036503,2.04728541964749,1.0126579934476,0.584622030967192,1.26216887122057,0.736399189138395,0.646584227275248,2.84007674013291,1.0075209822764,0.508681776931463,0.193260853163297,0.545492241181669,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0.36497735907583,0,3.85944562915731,0,0.928735856063958,0,0.354920400119532,0.337169380156203,0,0.441175890929576,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0.343135620597051,0.329250856225877,0,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0,1.14152491340759,0,0,0,0,0,0,2.01578553838631,0.283550194484773,0.447792613514241,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.411309970813294,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0.904902010304444,0,0.845302752556,3.72313363218819,4.16029747645464,0,0,0,0.857867961948885,0,0,0,1.42156779497018,0,0.602878754119172,0,1.89948683245908,0,0,0,0.718874566474748,0,1.42636905040718,0.868687840005475,0,0.179060963239896,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,6.03115498439341,7.31558854068363,5.36188211115378,5.38850508966481,0,0,0,1.32845119707087,0.184369168541703,1.21637060255316,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,2.48107807818777,2.60885354589706,1.96462066103151,2.30650468660262,6.65219423786715,5.62988724002626,1.48418066444991,0.771048469013278,0.532685175939381,0.410635780069046,0.519254429183621,0.813472649219715,0.120859449591622,1.00253235151642,0.0920809889358963,0.459257792658427,1.27463817604702,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0.863663664408557,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.457847324091717,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0,0.214840489736547,0.870100163485371,0.340906509664404,0.0890320356467374,0,0.576570202095319,0,0,1.39453664789186,1.25924938732256,0,0,0,0,0.37064843820784,0.429374660225974,0.372158369359667,0.949138274156178,0.762520775695299,0,2.1396949401696,0.636406495851874,0.78494864019923,0.179872457583315,1.09814811894422,0.353437207037059,0,0,0,0.48763373908959,0.243713489631284,0,0.545999645631943,0.848432591722276,0,0,0.66343897524122,0.876901770507525,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.88424136911809,0.35667105148125,0,0.422215270595328,1.64647446479951,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0,0,0,1.9924798825107,0.552567831062295,0,0.306806047506464,0,9.64222721751603,0,0,0,1.7755813014648,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0.139423744278603,0.846452843541768,0.341826167541004,0.46112780877612,0.0897576444097721,0.434589487688032,0,2.38153742844842,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0.884575645033392,1.22206028986725,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,5.12959723704208,0,0,0.31593289814244,0,0,0,0.330991955875499,0,0,0,0.693373365065693,0.173559738335131,0.0979923974143777,0.0870592065804026,1.22308667769421,0,0.290268993867255,0.146178634172371,0.0821154570532092,1.16386819786103,0.0882561266915003,0.451961481561065,0,0,0,0.195551382734803,0.0801588202515337,0.85381197895741,0.19980960958213,0,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.611989305817931,0,0,0,0,2.57859264851974,0,0.279282401272254,2.06244381610515,0,0,0,0.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| ||
|short_description=p34@CALD1 | |short_description=p34@CALD1 | ||
}} | }} |
Latest revision as of 12:25, 16 September 2015
Short description: | p34@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | -4bp_to_ENST00000472096_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.33e-10 | 76 |
fat cell | 2.97e-10 | 15 |
preadipocyte | 2.85e-08 | 12 |
omentum preadipocyte | 6.83e-08 | 3 |
adipocyte of omentum tissue | 1.88e-07 | 3 |
preadipocyte of the breast | 3.14e-07 | 3 |
receptor cell | 7.17e-07 | 6 |
sensory epithelial cell | 7.17e-07 | 6 |
olfactory epithelial cell | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.13e-13 | 6 |
peritoneum | 1.13e-13 | 6 |
abdominal cavity | 1.13e-13 | 6 |
visceral peritoneum | 1.13e-13 | 6 |
cavity lining | 2.09e-08 | 12 |
serous membrane | 2.09e-08 | 12 |
male genital duct | 2.14e-07 | 3 |
internal male genitalia | 2.14e-07 | 3 |