FFCP PHASE1:Hg19::chr10:115939099..115939117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56165 | |EntrezGene=56165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11712 | |HGNC=11712 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_uc001lbh.1_5end | |association_with_transcript=48bp_to_uc001lbh.1_5end | ||
|cluster_id=chr10:115939099..115939117,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_2_at_TDRD1_5end | |description=CAGE_peak_2_at_TDRD1_5end | ||
|id=chr10:115939099..115939117,+ | |id=chr10:115939099..115939117,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.12e-09!5 | |ontology_enrichment_celltype=CL:0002322!1.12e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.68e-12;3!CL:0002552;7.50e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.00e-12,3;CL:0002552,9.23e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.40e-14;10!UBERON:0005564;1.40e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.65e-10;1!DOID:1357;1.65e-10;1!DOID:5093;7.08e-10;4!DOID:1612;7.08e-10;4!DOID:3151;7.22e-10;1!DOID:3149;7.22e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.65e-10,1;DOID:1357,1.65e-10,1;DOID:3151,6.91e-10,1;DOID:3149,6.91e-10,1;DOID:5093,6.93e-10,4;DOID:1612,6.93e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.42e-18!115;UBERON:0002619!4.62e-10!22;UBERON:0001950!1.14e-09!20;UBERON:0000473!4.91e-09!8;UBERON:0004121!1.41e-08!169;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0001869!2.31e-08!32;UBERON:0003135!3.66e-08!11;UBERON:0000924!3.85e-08!173;UBERON:0006601!3.85e-08!173;UBERON:0002780!8.18e-08!41;UBERON:0001890!8.18e-08!41;UBERON:0006240!8.18e-08!41;UBERON:0001893!1.11e-07!34;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0003080!1.55e-07!42;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0002616!3.24e-07!59;UBERON:0001017!6.73e-07!82;UBERON:0000153!8.37e-07!129;UBERON:0007811!8.37e-07!129;UBERON:0002791!8.41e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!6.42e-18!115;UBERON:0002619!4.62e-10!22;UBERON:0001950!1.14e-09!20;UBERON:0000473!4.91e-09!8;UBERON:0004121!1.41e-08!169;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0001869!2.31e-08!32;UBERON:0003135!3.66e-08!11;UBERON:0000924!3.85e-08!173;UBERON:0006601!3.85e-08!173;UBERON:0002780!8.18e-08!41;UBERON:0001890!8.18e-08!41;UBERON:0006240!8.18e-08!41;UBERON:0001893!1.11e-07!34;UBERON:0001049!1.23e-07!57;UBERON:0005068!1.23e-07!57;UBERON:0006241!1.23e-07!57;UBERON:0007135!1.23e-07!57;UBERON:0003080!1.55e-07!42;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0002616!3.24e-07!59;UBERON:0001017!6.73e-07!82;UBERON:0000153!8.37e-07!129;UBERON:0007811!8.37e-07!129;UBERON:0002791!8.41e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.63e-18;8!UBERON:0003135;2.85e-13;11!UBERON:0001764;1.65e-10;1!UBERON:0001825;1.65e-10;1!UBERON:0003101;5.85e-10;22!UBERON:0000079;5.85e-10;22!UBERON:0000991;5.13e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.71e-18,8;UBERON:0003135,2.90e-13,11;UBERON:0001764,1.65e-10,1;UBERON:0001825,1.65e-10,1;UBERON:0003101,6.09e-10,22;UBERON:0000079,6.09e-10,22;UBERON:0000991,5.17e-07,21;UBERON:0009196,5.17e-07,21;UBERON:0009117,5.17e-07,21;UBERON:0005564,5.17e-07,21 | |||
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| ||
|short_description=p2@TDRD1 | |short_description=p2@TDRD1 | ||
}} | }} |
Latest revision as of 12:25, 16 September 2015
Short description: | p2@TDRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TDRD1_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | 48bp_to_uc001lbh.1_5end |
EntrezGene: | TDRD1 |
HGNC: | 11712 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.00e-12 | 3 |
fibroblast of gingiva | 9.23e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 3.71e-18 | 8 |
male reproductive organ | 2.90e-13 | 11 |
maxillary sinus | 1.65e-10 | 1 |
paranasal sinus | 1.65e-10 | 1 |
male organism | 6.09e-10 | 22 |
male reproductive system | 6.09e-10 | 22 |
gonad | 5.17e-07 | 21 |
indifferent external genitalia | 5.17e-07 | 21 |
indifferent gonad | 5.17e-07 | 21 |
gonad primordium | 5.17e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.65e-10 | 1 |
maxillary sinus cancer | 1.65e-10 | 1 |
skin squamous cell carcinoma | 6.91e-10 | 1 |
keratoacanthoma | 6.91e-10 | 1 |
thoracic cancer | 6.93e-10 | 4 |
breast cancer | 6.93e-10 | 4 |