FFCP PHASE1:Hg19::chr20:44408556..44408563,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:44408556..44408563,- to FFCP PHASE1:Hg19::chr20:44408556..44408563,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140686 | |EntrezGene=140686 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15957 | |HGNC=15957 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000474942_5end | |||
|cluster_id=chr20:44408556..44408563,- | |||
|coexpression_cluster_id=C742 | |||
|description=CAGE_peak_5_at_WFDC3_5end | |||
|id=chr20:44408556..44408563,- | |||
|ontology_enrichment_celltype=CL:0002541!5.97e-11!3;CL:0000223!5.60e-07!59;CL:0002537!6.71e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.51e-08;19!CL:0000322;8.86e-07;3!CL:0002178;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.46e-08,19;CL:0000322,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.54e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.11e-11!143;DOID:305!3.16e-10!106;DOID:162!4.33e-07!235;DOID:14566!8.50e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3908;2.85e-14;5!DOID:1324;1.13e-10;15!DOID:0050615;4.83e-10;16!DOID:3910;1.51e-09;2!DOID:3905;2.42e-08;9!DOID:4556;6.50e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,2.58e-14,5;DOID:1324,1.08e-10,15;DOID:0050615,4.61e-10,16;DOID:3910,1.44e-09,2;DOID:3905,2.29e-08,9;DOID:4556,6.14e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.00e-11!14;UBERON:0000158!3.00e-11!14;UBERON:0000476!5.97e-11!3;UBERON:0000920!5.97e-11!3;UBERON:0002394!2.00e-08!4;UBERON:0003928!2.00e-08!4;UBERON:0000077!4.10e-08!130;UBERON:0000478!4.84e-08!24;UBERON:0003124!4.91e-08!7;UBERON:0004921!3.11e-07!129;UBERON:0004185!3.11e-07!129;UBERON:0001255!4.13e-07!2;UBERON:0001556!4.13e-07!2;UBERON:0005911!6.11e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;9.48e-18;1!UBERON:0004903;1.51e-09;2!UBERON:0002173;1.51e-09;2!UBERON:0002186;1.51e-09;2!UBERON:0004802;1.51e-08;19!UBERON:0000115;1.51e-08;19!UBERON:0002048;1.87e-07;22!UBERON:0004807;1.87e-07;22!UBERON:0000117;1.87e-07;22!UBERON:0000171;1.87e-07;22!UBERON:0000170;1.87e-07;22!UBERON:0004821;8.86e-07;3!UBERON:0007499;8.86e-07;3!UBERON:0003215;8.86e-07;3!UBERON:0010368;8.86e-07;3!UBERON:0009911;8.86e-07;3!UBERON:0002299;8.86e-07;3!UBERON:0006524;8.86e-07;3!UBERON:0008874;8.86e-07;3!UBERON:0002169;8.86e-07;3!UBERON:0004894;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,7.37e-18,1;UBERON:0004903,1.44e-09,2;UBERON:0002173,1.44e-09,2;UBERON:0002186,1.44e-09,2;UBERON:0004802,1.46e-08,19;UBERON:0000115,1.46e-08,19;UBERON:0002048,1.81e-07,22;UBERON:0000117,1.81e-07,22;UBERON:0000171,1.81e-07,22;UBERON:0000170,1.81e-07,22;UBERON:0005597,1.81e-07,22;UBERON:0000118,1.81e-07,22;UBERON:0004821,8.62e-07,3;UBERON:0003215,8.62e-07,3;UBERON:0010368,8.62e-07,3;UBERON:0009911,8.62e-07,3;UBERON:0002299,8.62e-07,3;UBERON:0006524,8.62e-07,3;UBERON:0008874,8.62e-07,3;UBERON:0002169,8.62e-07,3;UBERON:0004894,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0.296964680832639,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0.176512253383001,0.225980740780532,0.411125773940253,0,0,0,0,0,0.39961921916426,1.00863292007874,0,0,0,0,0,1.22313785466253,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,2.85120908602398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,11.9818553793834,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.118193840883968,0,0.313972371402056,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,2.17144469965024,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.82315897372553,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0.296964680832639,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0.176512253383001,0.225980740780532,0.411125773940253,0,0,0,0,0,0.39961921916426,1.00863292007874,0,0,0,0,0,1.22313785466253,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,2.85120908602398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,11.9818553793834,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0.118193840883968,0,0.313972371402056,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,2.17144469965024,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.82315897372553,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,1.33151354837103,0,0 | ||
|short_description=p5@WFDC3 | |||
}} | }} |
Latest revision as of 12:19, 16 September 2015
Short description: | p5@WFDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WFDC3_5end |
Coexpression cluster: | C742_lung_gastric_trachea_bile_esophagus_gall_neuroectodermal |
Association with transcript: | -24bp_to_ENST00000474942_5end |
EntrezGene: | WFDC3 |
HGNC: | 15957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.46e-08 | 19 |
pneumocyte | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vagina | 7.37e-18 | 1 |
bronchoalveolar duct junction | 1.44e-09 | 2 |
alveolar duct | 1.44e-09 | 2 |
bronchiole | 1.44e-09 | 2 |
respiratory tract epithelium | 1.46e-08 | 19 |
lung epithelium | 1.46e-08 | 19 |
lung | 1.81e-07 | 22 |
respiratory tube | 1.81e-07 | 22 |
respiration organ | 1.81e-07 | 22 |
pair of lungs | 1.81e-07 | 22 |
lung primordium | 1.81e-07 | 22 |
lung bud | 1.81e-07 | 22 |
pulmonary alveolus epithelium | 8.62e-07 | 3 |
alveolus | 8.62e-07 | 3 |
pulmonary lobule | 8.62e-07 | 3 |
lobule | 8.62e-07 | 3 |
alveolus of lung | 8.62e-07 | 3 |
alveolar system | 8.62e-07 | 3 |
pulmonary acinus | 8.62e-07 | 3 |
alveolar sac | 8.62e-07 | 3 |
alveolar wall | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 2.58e-14 | 5 |
lung cancer | 1.08e-10 | 15 |
respiratory system cancer | 4.61e-10 | 16 |
lung adenocarcinoma | 1.44e-09 | 2 |
lung carcinoma | 2.29e-08 | 9 |
lung large cell carcinoma | 6.14e-07 | 3 |