FFCP PHASE1:Hg19::chrX:78622778..78622789,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:78622778..78622789,- to FFCP PHASE1:Hg19::chrX:78622778..78622789,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9452 | |EntrezGene=9452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6173 | |HGNC=6173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000482194_5end | |||
|cluster_id=chrX:78622778..78622789,- | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_2_at_ITM2A_5end | |||
|id=chrX:78622778..78622789,- | |||
|ontology_enrichment_celltype=CL:0000084!1.12e-12!25;CL:0000827!1.12e-12!25;CL:0000791!1.44e-10!18;CL:0000789!1.44e-10!18;CL:0002420!1.44e-10!18;CL:0002419!1.44e-10!18;CL:0000790!1.44e-10!18;CL:0000625!3.40e-07!11;CL:0000838!3.77e-07!52;CL:0000542!7.69e-07!53;CL:0000051!7.69e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.37e-17;25!CL:0000791;2.56e-13;18!CL:0000789;2.56e-13;18!CL:0002419;2.56e-13;18!CL:0000624;9.85e-09;6!CL:0000625;1.12e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.24e-18,25;CL:0000827,6.24e-18,25;CL:0000791,9.91e-14,18;CL:0000789,9.91e-14,18;CL:0002420,9.91e-14,18;CL:0002419,9.91e-14,18;CL:0000790,9.91e-14,18;CL:0000838,5.38e-09,52;CL:0000624,7.16e-09,6;CL:0000542,1.05e-08,53;CL:0000051,1.05e-08,53;CL:0000625,5.78e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.56e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;3.73e-09;39!DOID:8692;5.63e-09;31!DOID:1036;3.61e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.84e-11,39;DOID:8692,4.85e-09,31;DOID:1036,3.55e-08,8;DOID:2531,5.45e-08,51;DOID:0060083,5.45e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-38!115;UBERON:0001049!4.20e-19!57;UBERON:0005068!4.20e-19!57;UBERON:0006241!4.20e-19!57;UBERON:0007135!4.20e-19!57;UBERON:0002346!3.73e-18!90;UBERON:0002616!9.49e-17!59;UBERON:0003075!1.02e-15!86;UBERON:0007284!1.02e-15!86;UBERON:0003080!1.20e-15!42;UBERON:0001017!4.60e-15!82;UBERON:0002780!5.22e-15!41;UBERON:0001890!5.22e-15!41;UBERON:0006240!5.22e-15!41;UBERON:0005743!6.62e-15!86;UBERON:0000073!1.47e-13!94;UBERON:0001016!1.47e-13!94;UBERON:0000955!1.51e-13!69;UBERON:0006238!1.51e-13!69;UBERON:0001893!2.43e-13!34;UBERON:0002020!3.30e-13!34;UBERON:0003528!3.30e-13!34;UBERON:0002791!9.80e-13!33;UBERON:0001869!2.42e-12!32;UBERON:0002619!1.63e-11!22;UBERON:0001950!2.13e-10!20;UBERON:0003056!2.37e-10!61;UBERON:0000956!2.57e-09!25;UBERON:0000203!2.57e-09!25;UBERON:0000153!8.45e-08!129;UBERON:0007811!8.45e-08!129;UBERON:0000924!5.45e-07!173;UBERON:0006601!5.45e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.06e-08;22!UBERON:0001950;1.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.60e-17,114;UBERON:0001049,1.32e-09,56;UBERON:0005068,1.32e-09,56;UBERON:0006241,1.32e-09,56;UBERON:0007135,1.32e-09,56;UBERON:0000073,1.59e-09,53;UBERON:0002616,1.59e-09,53;UBERON:0002346,1.09e-08,86;UBERON:0002619,4.83e-08,22;UBERON:0001893,7.69e-08,34;UBERON:0003528,1.03e-07,34;UBERON:0002020,1.03e-07,34;UBERON:0001950,1.18e-07,20;UBERON:0001017,1.40e-07,81;UBERON:0001016,1.44e-07,89;UBERON:0001869,1.89e-07,32;UBERON:0000955,2.33e-07,68;UBERON:0006238,2.33e-07,68;UBERON:0003075,5.97e-07,82;UBERON:0007284,5.97e-07,82;UBERON:0002780,9.79e-07,41;UBERON:0001890,9.79e-07,41;UBERON:0003080,9.79e-07,41;UBERON:0006240,9.79e-07,41;UBERON:0000956,9.81e-07,25;UBERON:0000203,9.81e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.157421562627358,0,0.767658796194425,0.464448369948228,0,0,0,0,0,2.93600439334847,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,1.14681968437569,2.64342657158052,0.560508562981536,2.89722493252585,2.9506465517075,3.93010762749165,7.60725546298184,0.167186495390678,1.30368906653436,0.946895611469467,0,1.33692548262208,1.76763544484902,1.77227115666897,0.541607727530031,0.768547918354051,0.650296737799391,4.43982342429925,5.80335037350282,1.73881851441031,3.26230438956533,2.1403266247177,1.04535523804977,1.47302145506836,4.98186641682498,3.4362744548263,4.80737414837055,3.82278497188916,1.95325036156926,2.85135613334512,0.903450714466637,0.511946444617674,0,3.55165878066025,2.46338399076314,3.62892137804518,2.94184215361858,2.31719046212478,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,1.70272798147026,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0,4.39308490587859,2.49036383880697,1.67360306382335,1.20848795132744,2.28081631715554,0.976248230192678,0,0,0.357198913136319,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.548751427043128,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,2.07328115540772,2.01767934783746,3.02981840223312,0.380987365753014,0,0,0,0.514137463516618,0.300343057843917,1.71495859578347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,3.74358444383662,1.2937654491571,1.66845947163673,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,1.70764092485511,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.850468526382578,1.0795795805107,0,0,0,0,0,0,0.438519753291869,0,0.256450125116389,0,0,0.9273691048295,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,4.33965244425326,11.1598390910176,12.5735004002674,7.85172017542703,8.6786168916792,0.973865820823666,1.12318871245384,0,0,0,2.20079311142084,0,0,0,0,0,0,0,0,1.39203086947621,1.23087398947712,1.89318974933188,8.99294313594114,1.4098700508785,0,1.31857361344705,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.79323189425963,0.276283915531148,0,0,0,0,0,0,0,0.887790650732402,2.3948309234694,0,1.93866549219044,3.52518773015035,0,0,0,2.17499872630438,0,0,0,0,3.49925536059905,0,0.885741385813839,0.482385754501632,1.52581736317083,0.110579259931225,1.77328571372128,2.85201016300164,0,0,1.84680620409113,0,0,0,0.108647371922008,0,0,0.533034776018635,29.6360564767636,4.70940769185074,3.15802195610297,1.35357396370308,1.9606253431774,1.51039428278258,2.08729105996604,2.2251121057253,0,0,0,0,0.995261931078505,0.619202951523374,2.4441205797345,0,0,0.104421949505455,2.22423738836234,4.01288823649394,2.81117334870407,0,0,0,1.18375320854817,2.41981432097328,0.61214552326098,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.55182426381471,0,5.19755703795225,0,0,1.83601308272048,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,1.31443677139657,6.7027776305341,1.14580212005842,2.15361907373044,0.798716001995964,0.858452096273142,2.4548860318606,2.35142153703542,0,0,0,0,0,0.0984274815147488,0,2.38568906942791,0.953423842781029,0.321506296930038,1.10031549277787,0.83088067605837,0,0,1.51873891645062,0,0.394028536495991,0.734364233889974,0,0,0,6.4322579373603,1.98627591109629,0,0,0,0,0,0.246277562248017,0,0,0,0,1.80996138906171,1.58679122091228,0,0,1.17466153824464,1.10043013569766,0.414239055347196,0.496166021811951,0.988058159489721,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0.983617892129413,0,1.77213635993397,1.46431517882356,1.1267183763585,1.14681839138014,0.332787154610557,2.98062734118641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0.231522474323834,0,0,0.926404341482917,0.438568099157414,0,0,0,0,0,0,0.553033744606923,0.194860308839388,0.132864840313363,0,0,0,0,6.99955885492255,0.533458648470704,0,0,0,0,0,0,0,12.7385412903276,0,11.2023469769657,16.7934186880329,116.623554167721,6.703739015678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| ||
|short_description=p2@ITM2A | |||
}} | }} |
Latest revision as of 12:15, 16 September 2015
Short description: | p2@ITM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITM2A_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 25bp_to_ENST00000482194_5end |
EntrezGene: | ITM2A |
HGNC: | 6173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.24e-18 | 25 |
pro-T cell | 6.24e-18 | 25 |
mature alpha-beta T cell | 9.91e-14 | 18 |
alpha-beta T cell | 9.91e-14 | 18 |
immature T cell | 9.91e-14 | 18 |
mature T cell | 9.91e-14 | 18 |
immature alpha-beta T cell | 9.91e-14 | 18 |
lymphoid lineage restricted progenitor cell | 5.38e-09 | 52 |
CD4-positive, alpha-beta T cell | 7.16e-09 | 6 |
lymphocyte | 1.05e-08 | 53 |
common lymphoid progenitor | 1.05e-08 | 53 |
CD8-positive, alpha-beta T cell | 5.78e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.60e-17 | 114 |
neural tube | 1.32e-09 | 56 |
neural rod | 1.32e-09 | 56 |
future spinal cord | 1.32e-09 | 56 |
neural keel | 1.32e-09 | 56 |
regional part of nervous system | 1.59e-09 | 53 |
regional part of brain | 1.59e-09 | 53 |
neurectoderm | 1.09e-08 | 86 |
regional part of cerebral cortex | 4.83e-08 | 22 |
telencephalon | 7.69e-08 | 34 |
brain grey matter | 1.03e-07 | 34 |
gray matter | 1.03e-07 | 34 |
neocortex | 1.18e-07 | 20 |
central nervous system | 1.40e-07 | 81 |
nervous system | 1.44e-07 | 89 |
cerebral hemisphere | 1.89e-07 | 32 |
brain | 2.33e-07 | 68 |
future brain | 2.33e-07 | 68 |
neural plate | 5.97e-07 | 82 |
presumptive neural plate | 5.97e-07 | 82 |
regional part of forebrain | 9.79e-07 | 41 |
forebrain | 9.79e-07 | 41 |
anterior neural tube | 9.79e-07 | 41 |
future forebrain | 9.79e-07 | 41 |
cerebral cortex | 9.81e-07 | 25 |
pallium | 9.81e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.84e-11 | 39 |
myeloid leukemia | 4.85e-09 | 31 |
chronic leukemia | 3.55e-08 | 8 |
hematologic cancer | 5.45e-08 | 51 |
immune system cancer | 5.45e-08 | 51 |