FFCP PHASE1:Hg19::chrX:78618998..78619013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6173 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000462038_5end | |||
|cluster_id=chrX:78618998..78619013,- | |||
|coexpression_cluster_id=C2962 | |||
|description=CAGE_peak_4_at_ITM2A_5end | |||
|id=chrX:78618998..78619013,- | |||
|ontology_enrichment_celltype=CL:0000084!2.53e-13!25;CL:0000827!2.53e-13!25;CL:0000625!1.57e-12!11;CL:0000791!2.25e-10!18;CL:0000789!2.25e-10!18;CL:0002420!2.25e-10!18;CL:0002419!2.25e-10!18;CL:0000790!2.25e-10!18;CL:0000838!1.11e-07!52;CL:0000542!1.89e-07!53;CL:0000051!1.89e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;6.35e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.35e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.62e-07;3!UBERON:0003057;8.62e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.24e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.09e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.54e-09!115;UBERON:0001049!1.44e-08!57;UBERON:0005068!1.44e-08!57;UBERON:0006241!1.44e-08!57;UBERON:0007135!1.44e-08!57;UBERON:0002346!2.16e-08!90;UBERON:0002240!9.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.74e-18;1!UBERON:0003831;3.74e-18;1!UBERON:0003898;3.74e-18;1!UBERON:0004830;3.74e-18;1!UBERON:0003830;3.74e-18;1!UBERON:0005175;3.74e-18;1!UBERON:0001774;3.74e-18;1!UBERON:0001103;3.74e-18;1!UBERON:0002346;1.12e-17;4!UBERON:0000923;1.12e-17;4!UBERON:0010316;1.12e-17;4!UBERON:0005291;1.12e-17;4!UBERON:0002050;2.41e-14;5!UBERON:0005423;2.41e-14;5!UBERON:0005090;9.46e-10;2!UBERON:0001630;9.46e-10;2!UBERON:0000341;1.44e-09;2!UBERON:0000922;2.97e-09;49!UBERON:0002240;8.62e-07;3!UBERON:0001723;8.62e-07;3!UBERON:0005174;8.62e-07;3!UBERON:0002114;8.62e-07;2!UBERON:0001033;8.62e-07;3!UBERON:0001137;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.75e-18,1;UBERON:0003831,3.75e-18,1;UBERON:0003898,3.75e-18,1;UBERON:0004830,3.75e-18,1;UBERON:0003830,3.75e-18,1;UBERON:0005175,3.75e-18,1;UBERON:0001774,3.75e-18,1;UBERON:0001103,3.75e-18,1;UBERON:0010084,3.75e-18,1;UBERON:0005090,9.46e-10,2;UBERON:0001630,9.46e-10,2;UBERON:0000341,1.22e-09,2;UBERON:0002240,8.62e-07,3;UBERON:0005174,8.62e-07,3;UBERON:0001137,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0,0.812411591295047,0.128091319725675,0.130059347559878,0.328875809207352,0.829050053357545,0.289803085735052,0.14828656316206,0.535081656179426,0,0,0,0,0.759059076058509,0.637130828648193,0,0.950452044448374,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,1.64225599384209,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0.318852545457645,0.997896857164083,0.383010740264733,1.69338866179106,0.324621940274555,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.66614393599564,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0.583209226766509,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,10.2193298195736,0.31396051279005,0.166211681900156,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,4.81546588379273,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.213383459388282,0,0,0,0,0,0,0,0.471797825567689,0,0.509197589862076,1.70059936081346,11.2781545475692,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0.588925401344836,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0.213233981900981,1.66645102024618,0,0.248298857183432,0,0,0.606351566874658,0,1.02669990325584,0,0,0.99798106963804,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p4@ITM2A | |||
}} |
Latest revision as of 12:12, 16 September 2015
Short description: | p4@ITM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITM2A_5end |
Coexpression cluster: | C2962_neuroectodermal_chronic_diaphragm_left_acute_trachea_temporal |
Association with transcript: | 39bp_to_ENST00000462038_5end |
EntrezGene: | ITM2A |
HGNC: | 6173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.75e-18 | 1 |
respiratory system muscle | 3.75e-18 | 1 |
skeletal muscle of trunk | 3.75e-18 | 1 |
respiratory system skeletal muscle | 3.75e-18 | 1 |
thoracic segment muscle | 3.75e-18 | 1 |
chest organ | 3.75e-18 | 1 |
muscle of trunk | 3.75e-18 | 1 |
diaphragm | 3.75e-18 | 1 |
future diaphragm | 3.75e-18 | 1 |
muscle structure | 9.46e-10 | 2 |
muscle organ | 9.46e-10 | 2 |
throat | 1.22e-09 | 2 |
spinal cord | 8.62e-07 | 3 |
dorsal region element | 8.62e-07 | 3 |
dorsum | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.09e-07 | 10 |