FFCP PHASE1:Hg19::chr6:159083999..159084006,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94120 | |EntrezGene=94120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15587 | |HGNC=15587 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7H4 | |UniProt=F8W7H4 | ||
|association_with_transcript=-188bp_to_ENST00000367081_5end | |association_with_transcript=-188bp_to_ENST00000367081_5end | ||
|cluster_id=chr6:159083999..159084006,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_14_at_SYTL3_5end | |description=CAGE_peak_14_at_SYTL3_5end | ||
|id=chr6:159083999..159084006,+ | |id=chr6:159083999..159084006,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.11e-28!5;CL:0000457!2.11e-28!5;CL:0002191!2.11e-28!5;CL:0000097!2.11e-28!5;CL:0000831!2.11e-28!5;CL:0002028!2.11e-28!5;CL:0000163!1.11e-15!9;CL:0000738!1.48e-13!140;CL:0000766!1.40e-12!76;CL:0000839!3.34e-10!70;CL:0000037!3.64e-10!172;CL:0000566!3.64e-10!172;CL:0000557!5.04e-10!71;CL:0002031!5.68e-10!124;CL:0000988!2.37e-09!182;CL:0002032!1.47e-08!165;CL:0000837!1.47e-08!165;CL:0000767!3.43e-08!3;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112 | |ontology_enrichment_celltype=CL:0002274!2.11e-28!5;CL:0000457!2.11e-28!5;CL:0002191!2.11e-28!5;CL:0000097!2.11e-28!5;CL:0000831!2.11e-28!5;CL:0002028!2.11e-28!5;CL:0000163!1.11e-15!9;CL:0000738!1.48e-13!140;CL:0000766!1.40e-12!76;CL:0000839!3.34e-10!70;CL:0000037!3.64e-10!172;CL:0000566!3.64e-10!172;CL:0000557!5.04e-10!71;CL:0002031!5.68e-10!124;CL:0000988!2.37e-09!182;CL:0002032!1.47e-08!165;CL:0000837!1.47e-08!165;CL:0000767!3.43e-08!3;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.53e-105;5!CL:0000163;8.03e-59;9!CL:0000151;6.33e-14;36!CL:0000767;2.59e-12;3!CL:0000766;9.16e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.18e-105,5;CL:0002028,5.18e-105,5;CL:0000163,8.65e-59,9;CL:0000151,2.86e-15,36;CL:0000767,2.59e-12,3;CL:0000766,8.79e-12,72;CL:0000839,1.82e-08,66;CL:0000557,2.38e-08,67;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.18e-10!112;UBERON:0002390!9.00e-10!102;UBERON:0003061!9.00e-10!102;UBERON:0002371!1.28e-08!80;UBERON:0002405!2.59e-08!115;UBERON:0001474!7.56e-08!86 | |ontology_enrichment_uberon=UBERON:0002193!7.18e-10!112;UBERON:0002390!9.00e-10!102;UBERON:0003061!9.00e-10!102;UBERON:0002371!1.28e-08!80;UBERON:0002405!2.59e-08!115;UBERON:0001474!7.56e-08!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-07,76;UBERON:0001474,6.33e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0.276350017785848,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,1.47798971368783,0.968532774145487,4.97587477297853,7.78247748451592,5.93339437103986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0.276350017785848,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,1.47798971368783,0.968532774145487,4.97587477297853,7.78247748451592,5.93339437103986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@SYTL3 | |short_description=p14@SYTL3 | ||
}} | }} |
Latest revision as of 12:10, 16 September 2015
Short description: | p14@SYTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SYTL3_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -188bp_to_ENST00000367081_5end |
EntrezGene: | SYTL3 |
HGNC: | 15587 |
UniProt: | F8W7H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.18e-105 | 5 |
basophil mast progenitor cell | 5.18e-105 | 5 |
endocrine cell | 8.65e-59 | 9 |
secretory cell | 2.86e-15 | 36 |
basophil | 2.59e-12 | 3 |
myeloid leukocyte | 8.79e-12 | 72 |
myeloid lineage restricted progenitor cell | 1.82e-08 | 66 |
granulocyte monocyte progenitor cell | 2.38e-08 | 67 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-07 | 76 |
bone element | 6.33e-07 | 82 |