FFCP PHASE1:Hg19::chr7:134618177..134618224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_BX648808_5end | |association_with_transcript=108bp_to_BX648808_5end | ||
|cluster_id=chr7:134618177..134618224,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_12_at_CALD1_5end | |description=CAGE_peak_12_at_CALD1_5end | ||
|id=chr7:134618177..134618224,+ | |id=chr7:134618177..134618224,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.17e-23!115;UBERON:0000955!2.95e-11!69;UBERON:0006238!2.95e-11!69;UBERON:0000468!3.37e-11!659;UBERON:0001049!5.39e-11!57;UBERON:0005068!5.39e-11!57;UBERON:0006241!5.39e-11!57;UBERON:0007135!5.39e-11!57;UBERON:0000062!1.24e-10!511;UBERON:0001017!1.37e-10!82;UBERON:0000475!3.22e-10!365;UBERON:0002780!4.04e-10!41;UBERON:0001890!4.04e-10!41;UBERON:0006240!4.04e-10!41;UBERON:0005743!4.21e-10!86;UBERON:0000033!1.23e-09!123;UBERON:0002616!1.27e-09!59;UBERON:0000477!1.58e-09!286;UBERON:0003080!1.58e-09!42;UBERON:0002346!1.77e-09!90;UBERON:0000481!1.94e-09!347;UBERON:0003075!2.67e-09!86;UBERON:0007284!2.67e-09!86;UBERON:0000153!2.98e-09!129;UBERON:0007811!2.98e-09!129;UBERON:0000073!7.38e-09!94;UBERON:0001016!7.38e-09!94;UBERON:0002020!9.05e-09!34;UBERON:0003528!9.05e-09!34;UBERON:0002791!3.96e-08!33;UBERON:0001893!4.45e-08!34;UBERON:0004111!4.48e-08!241;UBERON:0000924!5.41e-08!173;UBERON:0006601!5.41e-08!173;UBERON:0000467!6.09e-08!625;UBERON:0000480!8.71e-08!626;UBERON:0004121!9.04e-08!169;UBERON:0001869!1.47e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.57e-07;114!UBERON:0003528;4.07e-07;34!UBERON:0002020;4.07e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-28,114;UBERON:0000955,1.58e-09,68;UBERON:0006238,1.58e-09,68;UBERON:0001049,2.15e-09,56;UBERON:0005068,2.15e-09,56;UBERON:0006241,2.15e-09,56;UBERON:0007135,2.15e-09,56;UBERON:0001017,5.59e-09,81;UBERON:0000073,8.06e-09,53;UBERON:0002616,8.06e-09,53;UBERON:0003075,2.27e-08,82;UBERON:0007284,2.27e-08,82;UBERON:0011216,2.73e-08,223;UBERON:0002346,4.40e-08,86;UBERON:0003528,4.86e-08,34;UBERON:0002020,4.86e-08,34;UBERON:0002780,7.48e-08,41;UBERON:0001890,7.48e-08,41;UBERON:0003080,7.48e-08,41;UBERON:0006240,7.48e-08,41;UBERON:0001016,1.57e-07,89;UBERON:0002791,5.19e-07,32 | |||
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| ||
|short_description=p12@CALD1 | |short_description=p12@CALD1 | ||
}} | }} |
Latest revision as of 12:08, 16 September 2015
Short description: | p12@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CALD1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 108bp_to_BX648808_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.03e-28 | 114 |
brain | 1.58e-09 | 68 |
future brain | 1.58e-09 | 68 |
neural tube | 2.15e-09 | 56 |
neural rod | 2.15e-09 | 56 |
future spinal cord | 2.15e-09 | 56 |
neural keel | 2.15e-09 | 56 |
central nervous system | 5.59e-09 | 81 |
regional part of nervous system | 8.06e-09 | 53 |
regional part of brain | 8.06e-09 | 53 |
neural plate | 2.27e-08 | 82 |
presumptive neural plate | 2.27e-08 | 82 |
organ system subdivision | 2.73e-08 | 223 |
neurectoderm | 4.40e-08 | 86 |
brain grey matter | 4.86e-08 | 34 |
gray matter | 4.86e-08 | 34 |
regional part of forebrain | 7.48e-08 | 41 |
forebrain | 7.48e-08 | 41 |
anterior neural tube | 7.48e-08 | 41 |
future forebrain | 7.48e-08 | 41 |
nervous system | 1.57e-07 | 89 |
regional part of telencephalon | 5.19e-07 | 32 |