FFCP PHASE1:Hg19::chr1:235291248..235291252,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:235291248..235291252,-
|short_description=p2@SNORA14B
|description=CAGE_peak_2_at_SNORA14B_5end
|association_with_transcript=0bp_to_ENST00000384452,NR_0029...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=677802 | |EntrezGene=677802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32603 | |HGNC=32603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000384452,NR_002956,uc001hwm.1_5end | |||
|cluster_id=chr1:235291248..235291252,- | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_2_at_SNORA14B_5end | |||
|id=chr1:235291248..235291252,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.63e-07;3!CL:0002592;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.05e-07,3;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.71e-19;1!UBERON:0003056;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.58e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.71e-19;1!UBERON:0001785;2.71e-19;1!UBERON:0002464;2.71e-19;1!UBERON:0004904;2.71e-19;1!UBERON:0001021;2.71e-19;1!UBERON:0004903;2.48e-10;2!UBERON:0003714;2.48e-10;2!UBERON:0005162;2.48e-10;2!UBERON:0000122;2.48e-10;2!UBERON:0002173;2.48e-10;2!UBERON:0002186;2.48e-10;2!UBERON:0004821;2.63e-07;3!UBERON:0007499;2.63e-07;3!UBERON:0003498;2.63e-07;3!UBERON:0003215;2.63e-07;3!UBERON:0005985;2.63e-07;3!UBERON:0010368;2.63e-07;3!UBERON:0009911;2.63e-07;3!UBERON:0002299;2.63e-07;3!UBERON:0001621;2.63e-07;3!UBERON:0006524;2.63e-07;3!UBERON:0008874;2.63e-07;3!UBERON:0002169;2.63e-07;3!UBERON:0004894;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.56e-19,1;UBERON:0001785,1.56e-19,1;UBERON:0002464,1.56e-19,1;UBERON:0004904,1.56e-19,1;UBERON:0001021,1.56e-19,1;UBERON:0003902,1.56e-19,1;UBERON:0005425,1.56e-19,1;UBERON:0003714,1.89e-10,2;UBERON:0005162,1.89e-10,2;UBERON:0000122,1.89e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0001621,2.05e-07,3;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,1.0246428261164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,72.696036719816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,1.32687795048244,0,0,0,0,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.01701460117107,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164230914106418,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.219881033490858,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.18378979906969,0,0,0,0.829169439458779,0,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,1.0246428261164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,72.696036719816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,1.32687795048244,0,0,0,0,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.01701460117107,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164230914106418,0,0.0882561266915003,0,0,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.0674035438541849,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0,0.138348634936231,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.219881033490858,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.18378979906969,0,0,0,0.829169439458779,0,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p2@SNORA14B | |||
}} | }} |
Latest revision as of 12:04, 16 September 2015
Short description: | p2@SNORA14B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNORA14B_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000384452, NR_002956, uc001hwm.1_5end |
EntrezGene: | SNORA14B |
HGNC: | 32603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.05e-07 | 3 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.56e-19 | 1 |
cranial nerve | 1.56e-19 | 1 |
nerve trunk | 1.56e-19 | 1 |
nerve connecting eye with brain | 1.56e-19 | 1 |
nerve | 1.56e-19 | 1 |
retinal neural layer | 1.56e-19 | 1 |
presumptive neural retina | 1.56e-19 | 1 |
neural tissue | 1.89e-10 | 2 |
multi cell component structure | 1.89e-10 | 2 |
neuron projection bundle | 1.89e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
coronary artery | 2.05e-07 | 3 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.58e-10 | 2 |