FFCP PHASE1:Hg19::chr16:31271322..31271339,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3684 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6149 | |||
|TSSclassifier=strong | |||
|UniProt=P11215 | |||
|association_with_transcript=34bp_to_ENST00000287497,ENST00000544665,NM_000632,NM_001145808,uc002ebq.2,uc002ebr.2_5end | |||
|cluster_id=chr16:31271322..31271339,+ | |||
|coexpression_cluster_id=C623 | |||
|description=CAGE_peak_2_at_ITGAM_5end | |||
|id=chr16:31271322..31271339,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-53!172;CL:0000566!1.45e-53!172;CL:0000766!1.94e-53!76;CL:0000763!2.93e-52!112;CL:0000049!2.93e-52!112;CL:0002032!9.07e-51!165;CL:0000837!9.07e-51!165;CL:0000988!7.30e-48!182;CL:0000738!2.91e-47!140;CL:0000839!1.64e-46!70;CL:0000557!4.92e-45!71;CL:0002194!4.97e-42!63;CL:0000576!4.97e-42!63;CL:0000040!4.97e-42!63;CL:0000559!4.97e-42!63;CL:0002031!1.70e-41!124;CL:0002009!3.57e-41!65;CL:0002087!4.96e-39!119;CL:0002057!1.24e-36!42;CL:0000860!8.04e-33!45;CL:0000094!4.86e-09!8;CL:0002393!2.63e-08!9;CL:0002397!2.63e-08!9;CL:0000134!1.88e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.16e-35;39!CL:0000234;9.16e-35;39!CL:0000860;1.04e-34;33!CL:0002057;1.04e-34;33!CL:0000576;1.17e-32;48!CL:0000766;1.90e-30;69!CL:0000763;1.43e-21;100!CL:0002087;3.32e-13;104!CL:0000738;9.50e-13;136!CL:0000094;2.65e-11;8!CL:0000988;5.00e-11;177!CL:0000235;4.57e-08;6!CL:0002393;8.97e-08;6!CL:0002397;8.97e-08;6!CL:0000081;1.46e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.47e-76,72;CL:0000763,1.57e-71,108;CL:0000049,1.57e-71,108;CL:0000839,9.34e-67,66;CL:0000557,2.99e-63,67;CL:0000037,1.76e-62,168;CL:0002194,5.94e-61,59;CL:0000576,5.94e-61,59;CL:0000040,5.94e-61,59;CL:0000559,5.94e-61,59;CL:0002032,9.86e-61,161;CL:0000837,9.86e-61,161;CL:0002009,3.19e-58,61;CL:0000988,2.24e-57,177;CL:0000738,9.41e-56,136;CL:0000473,3.54e-54,48;CL:0000234,3.54e-54,48;CL:0002031,1.47e-48,120;CL:0000860,2.50e-47,42;CL:0002057,2.50e-47,42;CL:0002087,1.86e-46,115;CL:0000134,2.49e-13,354;CL:0002320,1.79e-12,361;CL:0000094,2.64e-11,8;CL:0002393,2.38e-10,9;CL:0002397,2.38e-10,9;CL:0000219,1.53e-09,386;CL:0000235,4.71e-08,6;CL:0000081,1.46e-07,11;CL:0000048,7.61e-07,427;CL:0000034,9.37e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-34;42!CL:0000049;8.23e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;9.30e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.33e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-47!102;UBERON:0003061!1.67e-47!102;UBERON:0002193!1.05e-42!112;UBERON:0002371!1.01e-38!80;UBERON:0001474!5.31e-34!86;UBERON:0007023!6.44e-34!115;UBERON:0002405!2.97e-28!115;UBERON:0004765!2.86e-26!101;UBERON:0001434!2.86e-26!101;UBERON:0003081!3.95e-14!216;UBERON:0002204!1.76e-09!167;UBERON:0000178!2.58e-08!15;UBERON:0000179!2.58e-08!15;UBERON:0000463!2.58e-08!15;UBERON:0001049!4.09e-07!57;UBERON:0005068!4.09e-07!57;UBERON:0006241!4.09e-07!57;UBERON:0007135!4.09e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.73e-11;15!UBERON:0000179;6.73e-11;15!UBERON:0000463;6.73e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.44e-62,98;UBERON:0003061,1.44e-62,98;UBERON:0002193,2.42e-57,108;UBERON:0002371,6.88e-53,76;UBERON:0001474,2.92e-47,82;UBERON:0002405,1.30e-46,93;UBERON:0004765,6.00e-41,90;UBERON:0001434,1.61e-34,100;UBERON:0003081,5.99e-23,203;UBERON:0002204,4.90e-14,167;UBERON:0002384,7.99e-12,371;UBERON:0000178,6.79e-11,15;UBERON:0000179,6.79e-11,15;UBERON:0000463,6.79e-11,15;UBERON:0007023,9.16e-10,114;UBERON:0000926,7.77e-08,315;UBERON:0004120,7.77e-08,315;UBERON:0006603,7.77e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.314843125254717,61.364827188429,32.6254988382631,27.8669021968937,0,0,0,0,0,0.587200878669695,31.0237428777851,34.6941894123345,27.1263588394815,6.49354875295781,3.2389366601898,7.21211589375722,37.8035420826868,29.0964476640383,18.9215567726497,45.5560912335142,23.8477375052659,29.1123988641397,43.7292436329669,42.5226772838307,33.3439944142905,40.3352446461844,30.9832648120237,32.502356782642,40.8485876807452,19.376336654107,20.2251136000576,38.8726543311046,27.9208253556201,30.688182038354,44.20007422502,31.5152579042178,31.1144067888867,42.3705488397733,20.425868088881,28.0270012048009,47.4859977335245,28.1600775946909,30.4064382587163,41.7725656817024,31.6718766949306,21.5194423459801,18.167954622827,18.4965740969588,21.3851818418543,40.8876217373242,42.5000606741463,46.7711457288503,5.98526761856622,6.76316702476906,10.7771850721134,0,3.27683166757279,1.77901850772711,5.9742231159311,3.2031678962881,1.72425731986345,1.98313461835459,0.954053754535364,5.69212969109448,1.76171156811282,2.29363936875137,3.96513985737078,4.48406850385229,1.31692042387539,0.196709770113833,0,0.822405995998037,7.02183280640848,0,0,0,2.00538822393312,0,0.221533894583621,0.270803863765016,3.0741916734162,4.55207716459574,1.31550323682941,1.38175008892924,1.15921234294021,0.296573126324121,0,0,3.96582699441482,0,0.34362744548263,0,0.95569624297229,0,0,4.36667845325541,2.30375900077953,2.49861453104692,1.65744076430812,1.64225599384209,1.20964045934839,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.70272798147026,0,0,233.025028644063,231.070161396128,170.053231503629,2.38490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,69.8436212411135,104.700671320048,0,0,0,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0990026452641,102.025859600708,61.0874077006673,0,0,0,0,0,0,3.94130590316755,5.10680917276711,6.84182781284548,6.19715799692934,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.54099393465,13.0586843772353,23.1917333431335,0,0,0,0,0,0,0,4.53170748464433,4.52817907204986,3.08023287071396,0,0,0,0.502548796003046,0,152.797432885225,188.471719298536,196.847368882117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3685141943225,15.3157082581218,13.3409447254305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06963827304308,1.3071772551245,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0.596586391912706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02770547529675,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,3.67160823029439,0,0,0,0,56.3266846247708,57.3477905356781,38.1663615406689,30.7318990340548,38.2566913970161,58.3625980073446,41.5824206673348,33.3112574043594,0,0,0,0,0,0,0,3.5924286857907,10.9158060975449,4.02179807175377,0,0.280797178113459,1.14117339516596,2.0368386450493,7.51903431270201,1.86220955581764,1.2847046008296,0,13.2012333684001,12.7096977559633,4.60861146462687,2.46043718681657,2.0021897005429,1.17232857241224,0,1.23087398947712,0,0,0,0,9.08350711485743,0,0.891547074219827,0,0,0.296964680832639,0,0,1.1253553312841,0,0,0,0.597743964753209,1.38141957765574,0,0,0,0,0,0,0.511572370226872,0.493217028184668,11.974154617347,0,0.969332746095218,1.39152147242777,0,0,0,1.44999915086959,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0.110579259931225,0,0.219385397153973,0,0,0.846452843541768,0,0,0,0,0.957003479195758,0.183195186803725,2.13213910407454,0,5.96524974301094,8.47679577690798,0,0,0,0,4.4502242114506,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,2.08943512240099,0,0.937057782901357,0,0,0,0.394584402849391,0,0.30607276163049,9.09886746650227,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.872901148395775,0,0.451961481561065,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.32739144116388,1.27746588066972,0,0,0.837847203816763,0.687481272035051,2.87149209830726,0.998395002494955,2.14613024068285,3.12440040418622,0.739018197353989,0,0,0,0,0,0,0,0.795229689809303,1.90684768556206,0,0,0,0.674921674654501,0,0.728994679896296,0,0.945668487590378,1.31136470337495,0,0,0,1.42939065274673,3.31045985182716,0,0,0,0,0,1.8881279772348,0,0,1.02586563574658,0,1.0342636508924,1.98348902614035,0,0,5.9800951037909,2.04365596629566,7.87054205159671,11.4118185016749,0,0,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.3755727921195,1.14681839138014,2.3295100822739,2.67014532647949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,2.13383459388282,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,1.11743701340006,0.41023272848151,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0,0,0,1.27857558193737,0,0,0,0,0,0.472763092328763,0,1.03343398250592,0.824405532520789,0,0.548257766857182,0.992422356778588,0,0,0,1.00885116665647,0,0.682986574053893,1.68534503309014,0,0,0.611727596791485,0.460409414939944,0,0,0.863424021355654,0.628462359664008,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.513314034281235,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0.617393264863557,0,0,0.490296643507811,0,1.17785080268967,3.26751040359795,1.2679671827502,0,8.17660086424726,9.15302009224796,0.299823467774787,0,0,0,0,0.917458566809082,3.01013124618048,0,0.815897882290976,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.535928260312357,2.48750831837634,1.86179392551411,2.34557380091079,0,0.968833647540092,2.17261500035503,0,0.381882949668989,0.202117188958219,0.217716747896961,0,2.02056159043763,2.29511057256564,0.332660356546013,0,0,0,0,2.34640942403454,1.22241444182866,1.62758471326295,1.99727032255654,2.01273793591026,0 | |||
|short_description=p2@ITGAM | |||
}} |
Latest revision as of 12:02, 16 September 2015
Short description: | p2@ITGAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGAM_5end |
Coexpression cluster: | C623_Dendritic_Neutrophils_Eosinophils_Whole_Macrophage_CD14_Basophils |
Association with transcript: | 34bp_to_ENST00000287497, ENST00000544665, NM_000632, NM_001145808, uc002ebq.2, uc002ebr.2_5end |
EntrezGene: | ITGAM |
HGNC: | 6149 |
UniProt: | P11215 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-62 | 98 |
blood island | 1.44e-62 | 98 |
hemolymphoid system | 2.42e-57 | 108 |
bone marrow | 6.88e-53 | 76 |
bone element | 2.92e-47 | 82 |
immune system | 1.30e-46 | 93 |
skeletal element | 6.00e-41 | 90 |
skeletal system | 1.61e-34 | 100 |
lateral plate mesoderm | 5.99e-23 | 203 |
musculoskeletal system | 4.90e-14 | 167 |
connective tissue | 7.99e-12 | 371 |
blood | 6.79e-11 | 15 |
haemolymphatic fluid | 6.79e-11 | 15 |
organism substance | 6.79e-11 | 15 |
adult organism | 9.16e-10 | 114 |
mesoderm | 7.77e-08 | 315 |
mesoderm-derived structure | 7.77e-08 | 315 |
presumptive mesoderm | 7.77e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.33e-07 | 31 |