FFCP PHASE1:Hg19::chr11:124609823..124609869,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:124609823..124609869,+ to FFCP PHASE1:Hg19::chr11:124609823..124609869,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4900 | |EntrezGene=4900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8000 | |HGNC=8000 | ||
|TSSclassifier=strong | |||
|UniProt=Q92686 | |UniProt=Q92686 | ||
|association_with_transcript=0bp_to_ENST00000284292,ENST00000412681,ENST00000526916,NM_001126181,NM_006176,uc001qaq.2,uc001qar.2_5end | |||
|cluster_id=chr11:124609823..124609869,+ | |||
|coexpression_cluster_id=C795 | |||
|description=CAGE_peak_1_at_NRGN_5end | |||
|id=chr11:124609823..124609869,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.98e-20!42;CL:0000763!4.59e-19!112;CL:0000049!4.59e-19!112;CL:0000860!3.48e-18!45;CL:0000766!3.47e-16!76;CL:0002009!3.20e-15!65;CL:0002194!4.34e-15!63;CL:0000576!4.34e-15!63;CL:0000040!4.34e-15!63;CL:0000559!4.34e-15!63;CL:0000839!2.76e-13!70;CL:0000557!3.06e-13!71;CL:0000037!4.92e-10!172;CL:0000566!4.92e-10!172;CL:0000988!7.46e-10!182;CL:0002032!3.42e-09!165;CL:0000837!3.42e-09!165;CL:0000115!1.05e-07!35;CL:0002139!1.56e-07!24;CL:0000071!2.50e-07!18;CL:0002546!2.50e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.03e-15;33!CL:0002057;5.03e-15;33!CL:0000576;1.58e-11;48!CL:0000473;1.64e-11;39!CL:0000234;1.64e-11;39!CL:0000766;1.38e-08;69!CL:0000763;1.55e-07;100!CL:0002139;1.56e-07;24!CL:0000071;2.46e-07;18!CL:0000115;4.59e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.19e-20,108;CL:0000049,1.19e-20,108;CL:0000860,4.56e-20,42;CL:0002057,4.56e-20,42;CL:0000473,4.13e-18,48;CL:0000234,4.13e-18,48;CL:0000766,6.83e-18,72;CL:0002009,4.69e-17,61;CL:0002194,5.91e-17,59;CL:0000576,5.91e-17,59;CL:0000040,5.91e-17,59;CL:0000559,5.91e-17,59;CL:0000839,7.72e-15,66;CL:0000557,8.96e-15,67;CL:0000037,9.33e-11,168;CL:0000988,2.69e-10,177;CL:0002032,6.90e-10,161;CL:0000837,6.90e-10,161;CL:0000115,4.17e-08,36;CL:0002139,1.51e-07,24;CL:0000071,2.44e-07,18;CL:0002546,2.44e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-14;42!CL:0002546;2.46e-07;18!CL:0000049;7.40e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.04e-16!34;UBERON:0007023!1.16e-16!115;UBERON:0001869!2.66e-16!32;UBERON:0002193!4.59e-16!112;UBERON:0002791!4.74e-16!33;UBERON:0003081!6.13e-16!216;UBERON:0003080!6.27e-16!42;UBERON:0002780!6.27e-16!41;UBERON:0001890!6.27e-16!41;UBERON:0006240!6.27e-16!41;UBERON:0002020!6.76e-16!34;UBERON:0003528!6.76e-16!34;UBERON:0002390!2.94e-15!102;UBERON:0003061!2.94e-15!102;UBERON:0001049!1.21e-14!57;UBERON:0005068!1.21e-14!57;UBERON:0006241!1.21e-14!57;UBERON:0007135!1.21e-14!57;UBERON:0002346!1.90e-13!90;UBERON:0002619!2.85e-13!22;UBERON:0001017!6.37e-13!82;UBERON:0000025!1.31e-12!194;UBERON:0003075!1.33e-12!86;UBERON:0007284!1.33e-12!86;UBERON:0003056!2.03e-12!61;UBERON:0001950!4.11e-12!20;UBERON:0005743!4.13e-12!86;UBERON:0000956!4.46e-12!25;UBERON:0000203!4.46e-12!25;UBERON:0000955!6.32e-12!69;UBERON:0006238!6.32e-12!69;UBERON:0002616!7.93e-12!59;UBERON:0002371!2.43e-11!80;UBERON:0001474!4.20e-11!86;UBERON:0001009!5.31e-11!113;UBERON:0004535!7.69e-11!110;UBERON:0000073!1.38e-10!94;UBERON:0001016!1.38e-10!94;UBERON:0004111!1.08e-08!241;UBERON:0004765!2.66e-08!101;UBERON:0001434!2.66e-08!101;UBERON:0000178!2.94e-08!15;UBERON:0000179!2.94e-08!15;UBERON:0000463!2.94e-08!15;UBERON:0000479!3.85e-08!787;UBERON:0002405!1.46e-07!115;UBERON:0000055!1.78e-07!69;UBERON:0001986!2.50e-07!18;UBERON:0004638!2.50e-07!18;UBERON:0004852!2.50e-07!18;UBERON:0002050!3.69e-07!605;UBERON:0005423!3.69e-07!605;UBERON:0000923!4.24e-07!604;UBERON:0005291!4.24e-07!604;UBERON:0006598!4.24e-07!604;UBERON:0002532!4.24e-07!604;UBERON:0000477!4.31e-07!286;UBERON:0000467!6.23e-07!625;UBERON:0000480!7.74e-07!626;UBERON:0002049!9.14e-07!79;UBERON:0007798!9.14e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.03e-14;34!UBERON:0001869;1.13e-14;32!UBERON:0002791;3.92e-14;32!UBERON:0003528;8.53e-14;34!UBERON:0002020;8.53e-14;34!UBERON:0002619;2.47e-13;22!UBERON:0001950;3.58e-12;20!UBERON:0000956;4.37e-12;25!UBERON:0000203;4.37e-12;25!UBERON:0002780;8.12e-12;41!UBERON:0001890;8.12e-12;41!UBERON:0000073;1.04e-08;53!UBERON:0002616;1.04e-08;53!UBERON:0000178;2.80e-08;15!UBERON:0000179;2.80e-08;15!UBERON:0000463;2.80e-08;15!UBERON:0004638;2.46e-07;18!UBERON:0001986;2.46e-07;18!UBERON:0004852;2.46e-07;18 | |||
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| ||
|short_description=p1@NRGN | |||
}} | }} |
Latest revision as of 11:32, 16 September 2015
Short description: | p1@NRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRGN_5end |
Coexpression cluster: | C795_occipital_postcentral_Whole_temporal_paracentral_insula_parietal |
Association with transcript: | 0bp_to_ENST00000284292, ENST00000412681, ENST00000526916, NM_001126181, NM_006176, uc001qaq.2, uc001qar.2_5end |
EntrezGene: | NRGN |
HGNC: | 8000 |
UniProt: | Q92686 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.19e-20 | 108 |
common myeloid progenitor | 1.19e-20 | 108 |
classical monocyte | 4.56e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.56e-20 | 42 |
defensive cell | 4.13e-18 | 48 |
phagocyte | 4.13e-18 | 48 |
myeloid leukocyte | 6.83e-18 | 72 |
macrophage dendritic cell progenitor | 4.69e-17 | 61 |
monopoietic cell | 5.91e-17 | 59 |
monocyte | 5.91e-17 | 59 |
monoblast | 5.91e-17 | 59 |
promonocyte | 5.91e-17 | 59 |
myeloid lineage restricted progenitor cell | 7.72e-15 | 66 |
granulocyte monocyte progenitor cell | 8.96e-15 | 67 |
hematopoietic stem cell | 9.33e-11 | 168 |
hematopoietic cell | 2.69e-10 | 177 |
hematopoietic oligopotent progenitor cell | 6.90e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.90e-10 | 161 |
endothelial cell | 4.17e-08 | 36 |
endothelial cell of vascular tree | 1.51e-07 | 24 |
blood vessel endothelial cell | 2.44e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-07 | 18 |