FFCP PHASE1:Hg19::chr14:89883509..89883587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1112 | |EntrezGene=1112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1928 | |HGNC=1928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000557258_5end | |association_with_transcript=-53bp_to_ENST00000557258_5end | ||
|cluster_id=chr14:89883509..89883587,- | |||
|description=CAGE_peak_2_at_FOXN3_5end | |description=CAGE_peak_2_at_FOXN3_5end | ||
|id=chr14:89883509..89883587,- | |id=chr14:89883509..89883587,- | ||
|ontology_enrichment_celltype=CL:0000860;1.90e-15;33!CL:0002057;1.90e-15;33!CL:0000576;3.26e-13;48!CL:0000473;2.49e-12;39!CL:0000234;2.49e-12;39!CL:0000766;1.98e-10;69!CL:0000094;9.32e-07;8 | |ontology_enrichment_celltype=CL:0000766!9.79e-21!76;CL:0002057!8.04e-19!42;CL:0000763!2.58e-18!112;CL:0000049!2.58e-18!112;CL:0000557!7.99e-18!71;CL:0002009!6.71e-17!65;CL:0000860!5.21e-16!45;CL:0002194!8.48e-16!63;CL:0000576!8.48e-16!63;CL:0000040!8.48e-16!63;CL:0000559!8.48e-16!63;CL:0000738!1.38e-15!140;CL:0000839!1.77e-15!70;CL:0000037!6.70e-14!172;CL:0000566!6.70e-14!172;CL:0002032!2.37e-12!165;CL:0000837!2.37e-12!165;CL:0000988!6.15e-12!182;CL:0002031!2.01e-09!124;CL:0002087!3.35e-09!119;CL:0000094!9.88e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.90e-15;33!CL:0002057;1.90e-15;33!CL:0000576;3.26e-13;48!CL:0000473;2.49e-12;39!CL:0000234;2.49e-12;39!CL:0000766;1.98e-10;69!CL:0000094;9.32e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.44e-23,72;CL:0000557,1.71e-20,67;CL:0000763,2.20e-20,108;CL:0000049,2.20e-20,108;CL:0002009,1.25e-19,61;CL:0000860,7.91e-19,42;CL:0002057,7.91e-19,42;CL:0002194,1.86e-18,59;CL:0000576,1.86e-18,59;CL:0000040,1.86e-18,59;CL:0000559,1.86e-18,59;CL:0000839,6.45e-18,66;CL:0000473,1.07e-17,48;CL:0000234,1.07e-17,48;CL:0000738,3.58e-17,136;CL:0000037,2.92e-15,168;CL:0002032,1.21e-13,161;CL:0000837,1.21e-13,161;CL:0000988,1.68e-13,177;CL:0002031,1.21e-10,120;CL:0002087,2.00e-10,115;CL:0000094,9.83e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.87e-17!102;UBERON:0003061!1.87e-17!102;UBERON:0001474!2.16e-17!86;UBERON:0002371!2.21e-16!80;UBERON:0002193!3.03e-16!112;UBERON:0007023!3.54e-15!115;UBERON:0004765!5.26e-14!101;UBERON:0001434!5.26e-14!101;UBERON:0002405!1.41e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.88e-20,82;UBERON:0002390,1.53e-19,98;UBERON:0003061,1.53e-19,98;UBERON:0002371,9.66e-19,76;UBERON:0002193,3.71e-18,108;UBERON:0002405,7.99e-18,93;UBERON:0004765,4.49e-17,90;UBERON:0001434,2.15e-15,100;UBERON:0007023,7.45e-15,114 | |||
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| ||
|short_description=p2@FOXN3 | |short_description=p2@FOXN3 | ||
}} | }} |
Latest revision as of 11:28, 16 September 2015
Short description: | p2@FOXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000557258_5end |
EntrezGene: | FOXN3 |
HGNC: | 1928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.44e-23 | 72 |
granulocyte monocyte progenitor cell | 1.71e-20 | 67 |
myeloid cell | 2.20e-20 | 108 |
common myeloid progenitor | 2.20e-20 | 108 |
macrophage dendritic cell progenitor | 1.25e-19 | 61 |
classical monocyte | 7.91e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.91e-19 | 42 |
monopoietic cell | 1.86e-18 | 59 |
monocyte | 1.86e-18 | 59 |
monoblast | 1.86e-18 | 59 |
promonocyte | 1.86e-18 | 59 |
myeloid lineage restricted progenitor cell | 6.45e-18 | 66 |
defensive cell | 1.07e-17 | 48 |
phagocyte | 1.07e-17 | 48 |
leukocyte | 3.58e-17 | 136 |
hematopoietic stem cell | 2.92e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.21e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-13 | 161 |
hematopoietic cell | 1.68e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 1.21e-10 | 120 |
nongranular leukocyte | 2.00e-10 | 115 |
granulocyte | 9.83e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.88e-20 | 82 |
hematopoietic system | 1.53e-19 | 98 |
blood island | 1.53e-19 | 98 |
bone marrow | 9.66e-19 | 76 |
hemolymphoid system | 3.71e-18 | 108 |
immune system | 7.99e-18 | 93 |
skeletal element | 4.49e-17 | 90 |
skeletal system | 2.15e-15 | 100 |
adult organism | 7.45e-15 | 114 |