FFCP PHASE1:Hg19::chr17:56492989..56493006,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18505 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=113bp_to_uc010wnv.1_5end | |||
|cluster_id=chr17:56492989..56493006,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_8_at_RNF43_5end | |||
|id=chr17:56492989..56493006,- | |||
|ontology_enrichment_celltype=CL:0002253!2.14e-08!2;CL:0000223!7.58e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000317;5.69e-21;2!CL:1000448;5.69e-21;2!CL:0002308;5.69e-21;2!CL:0002140;5.69e-21;2!CL:0000622;3.22e-09;5!CL:0000154;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,4.66e-21,2;CL:1000448,4.66e-21,2;CL:0002308,4.66e-21,2;CL:0002140,4.66e-21,2;CL:0000622,2.97e-09,5;CL:0000154,6.34e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!8.56e-13!14;DOID:305!7.11e-11!106;DOID:3493!4.91e-09!2;DOID:0050687!1.05e-07!143;DOID:162!1.41e-07!235;DOID:14566!2.78e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.11e-21,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.69e-21;2!UBERON:0007771;5.69e-21;2!UBERON:0003297;5.69e-21;2!UBERON:0001821;5.69e-21;2!UBERON:0003487;5.69e-21;2!UBERON:0001820;5.69e-21;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,4.66e-21,2;UBERON:0007771,4.66e-21,2;UBERON:0003297,4.66e-21,2;UBERON:0001821,4.66e-21,2;UBERON:0003487,4.66e-21,2;UBERON:0001820,4.66e-21,2;UBERON:0005089,4.66e-21,2;UBERON:0005088,4.66e-21,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.305653622991805,0.328402357799783,0.550975469195755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.774054819518572,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.432271251462318,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.472699093843342,0.576911008668165,0.471824806979294,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,1.27668251554036,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.196300467230486,12.3137104232092,0,0,0,0,0,0.795803100645473,0,0.79062257427272,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@RNF43 | |||
}} |
Latest revision as of 11:23, 16 September 2015
Short description: | p8@RNF43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RNF43_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 113bp_to_uc010wnv.1_5end |
EntrezGene: | RNF43 |
HGNC: | 18505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 4.66e-21 | 2 |
epithelial cell of sweat gland | 4.66e-21 | 2 |
epithelial cell of skin gland | 4.66e-21 | 2 |
acinar cell of sebaceous gland | 4.66e-21 | 2 |
acinar cell | 2.97e-09 | 5 |
protein secreting cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 4.66e-21 | 2 |
epidermis gland | 4.66e-21 | 2 |
gland of integumental system | 4.66e-21 | 2 |
sebaceous gland | 4.66e-21 | 2 |
skin sebaceous gland | 4.66e-21 | 2 |
sweat gland | 4.66e-21 | 2 |
sweat gland placode | 4.66e-21 | 2 |
sebaceous gland placode | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.11e-21 | 2 |