FFCP PHASE1:Hg19::chr11:124492805..124492810,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:124492805..124492810,+ to FFCP PHASE1:Hg19::chr11:124492805..124492810,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84897 | |EntrezGene=84897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29551 | |HGNC=29551 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFP5 | |UniProt=E9PFP5 | ||
|association_with_transcript=10bp_to_ENST00000452080_5end | |||
|cluster_id=chr11:124492805..124492810,+ | |||
|description=CAGE_peak_3_at_TBRG1_5end | |||
|id=chr11:124492805..124492810,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.91e-10!45;CL:0002057!6.69e-10!42;CL:0000557!8.83e-08!71;CL:0000839!1.56e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-10;33!CL:0002057;1.97e-10;33!CL:0000473;4.46e-07;39!CL:0000234;4.46e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.60e-08,42;CL:0002057,3.60e-08,42;CL:0000473,6.37e-07,48;CL:0000234,6.37e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.01e-07!20;UBERON:0000062!1.89e-07!511;UBERON:0001474!2.21e-07!86;UBERON:0000480!2.23e-07!626;UBERON:0007023!2.26e-07!115;UBERON:0000467!2.62e-07!625;UBERON:0002371!7.52e-07!80;UBERON:0004765!7.91e-07!101;UBERON:0001434!7.91e-07!101;UBERON:0002619!8.57e-07!22;UBERON:0002020!8.79e-07!34;UBERON:0003528!8.79e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.96e-37;20!UBERON:0002619;1.58e-33;22!UBERON:0000956;2.78e-29;25!UBERON:0000203;2.78e-29;25!UBERON:0001869;1.11e-27;32!UBERON:0001893;5.39e-25;34!UBERON:0002791;7.23e-24;32!UBERON:0003528;3.88e-21;34!UBERON:0002020;3.88e-21;34!UBERON:0002780;2.11e-16;41!UBERON:0001890;2.11e-16;41!UBERON:0001872;2.21e-14;5!UBERON:0002021;2.49e-14;5!UBERON:0001870;3.16e-13;3!UBERON:0000200;1.11e-11;6!UBERON:0000073;1.29e-09;53!UBERON:0002616;1.29e-09;53!UBERON:0002702;2.19e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.39e-37,20;UBERON:0002619,1.12e-33,22;UBERON:0001869,1.47e-29,32;UBERON:0000956,2.05e-29,25;UBERON:0000203,2.05e-29,25;UBERON:0001893,1.19e-27,34;UBERON:0002791,9.07e-26,32;UBERON:0003528,4.28e-24,34;UBERON:0002020,4.28e-24,34;UBERON:0002780,2.09e-22,41;UBERON:0001890,2.09e-22,41;UBERON:0003080,2.09e-22,41;UBERON:0006240,2.09e-22,41;UBERON:0000073,5.02e-19,53;UBERON:0002616,5.02e-19,53;UBERON:0003056,4.61e-18,61;UBERON:0001049,8.23e-18,56;UBERON:0005068,8.23e-18,56;UBERON:0006241,8.23e-18,56;UBERON:0007135,8.23e-18,56;UBERON:0000955,1.53e-15,68;UBERON:0006238,1.53e-15,68;UBERON:0001872,2.63e-14,5;UBERON:0002021,2.63e-14,5;UBERON:0003075,3.98e-14,82;UBERON:0007284,3.98e-14,82;UBERON:0001870,5.32e-14,3;UBERON:0002346,2.85e-13,86;UBERON:0001017,1.90e-12,81;UBERON:0000200,4.28e-12,6;UBERON:0010371,1.65e-11,104;UBERON:0001016,7.93e-11,89;UBERON:0010314,2.44e-10,132;UBERON:0002702,8.25e-10,2;UBERON:0007023,4.97e-08,114 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0,0.157421562627358,0,1.15148819429164,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0.447830948479849,0,0,1.16318591023652,0.377875943688809,0.727752183563449,0.929716147622738,0,0.619412741790207,1.1507695692886,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,1.27867425159808,0.329851300186716,1.39624560335142,1.27867425159808,1.7412554317715,1.13477044938228,0,1.7587406567972,0,1.52032191293582,1.21079900526674,0.736555271975129,0.949387162322653,0.422510572623884,0.425208599930087,0.838634582033504,0.673971786878971,0.450530678524519,0.32145117339416,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0.589211814949674,0,0,0.384273959177026,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0,0,0.087834785693126,0.130979075497713,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0,0,0,0.371457501329565,0.39752481473341,0,0,1.13061588384802,0,0.550236083880135,0,0.516833518338658,0.35576626268671,0.33472061276467,0,1.52054421143703,0.24406205754817,0.367663080345869,0,0.446498641420399,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0.506522046658319,0.794455084879313,0.286836620748814,0.709336764396714,1.12135520028461,0,0.49333509683432,0,0.404132016209064,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.309977343527296,1.18800285728205,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0.600952235626387,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.506328996723799,0.292311015483596,0.252433774244115,0.184099797284599,0.323292113637624,0,0.10075209822764,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0.860919069801795,0,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,1.44331342025273,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.702012795417713,0,0,0,0.425325291727159,0.179117045405697,0,0.383382679165211,0,0.264145302039678,0.414656231081544,0.864719720501769,1.00993946741104,0,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0,0.542621605391443,0,0,0.355391948742546,0,0,1.74306691720059,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0.358121926479791,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0.215714200818617,0.320182673410333,0.303127571446259,1.66435439510497,0.907170879989041,0,0.61384789315225,0,0.128139149255701,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.164254312027618,1.03850885836724,0.232420756919918,0.120859449591622,0.200506470303285,0.552485933615378,0.229628896329213,0,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0.495056999523528,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.275673144969061,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.638063562472921,0.708104465988849,0.464845549297286,0.62962469366128,0.6970372701606,0.616067160352178,0,0.869932992075073,0.55597265731176,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0.731140468893853,0,0.272999822815972,0.565621727814851,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,0,0.349934720244983,0,0,3.26672954583968,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0.426851060090485,0.159426272728822,0,0,0,0,0,0,0,0,0,0.481764225311099,0,0,0,0,0.447352215784832,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0.111308705022906,0,0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| ||
|short_description=p3@TBRG1 | |||
}} | }} |
Latest revision as of 11:21, 16 September 2015
Short description: | p3@TBRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000452080_5end |
EntrezGene: | TBRG1 |
HGNC: | 29551 |
UniProt: | E9PFP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.60e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.60e-08 | 42 |
defensive cell | 6.37e-07 | 48 |
phagocyte | 6.37e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.39e-37 | 20 |
regional part of cerebral cortex | 1.12e-33 | 22 |
cerebral hemisphere | 1.47e-29 | 32 |
cerebral cortex | 2.05e-29 | 25 |
pallium | 2.05e-29 | 25 |
telencephalon | 1.19e-27 | 34 |
regional part of telencephalon | 9.07e-26 | 32 |
brain grey matter | 4.28e-24 | 34 |
gray matter | 4.28e-24 | 34 |
regional part of forebrain | 2.09e-22 | 41 |
forebrain | 2.09e-22 | 41 |
anterior neural tube | 2.09e-22 | 41 |
future forebrain | 2.09e-22 | 41 |
regional part of nervous system | 5.02e-19 | 53 |
regional part of brain | 5.02e-19 | 53 |
pre-chordal neural plate | 4.61e-18 | 61 |
neural tube | 8.23e-18 | 56 |
neural rod | 8.23e-18 | 56 |
future spinal cord | 8.23e-18 | 56 |
neural keel | 8.23e-18 | 56 |
brain | 1.53e-15 | 68 |
future brain | 1.53e-15 | 68 |
parietal lobe | 2.63e-14 | 5 |
occipital lobe | 2.63e-14 | 5 |
neural plate | 3.98e-14 | 82 |
presumptive neural plate | 3.98e-14 | 82 |
frontal cortex | 5.32e-14 | 3 |
neurectoderm | 2.85e-13 | 86 |
central nervous system | 1.90e-12 | 81 |
gyrus | 4.28e-12 | 6 |
ecto-epithelium | 1.65e-11 | 104 |
nervous system | 7.93e-11 | 89 |
structure with developmental contribution from neural crest | 2.44e-10 | 132 |
middle frontal gyrus | 8.25e-10 | 2 |
adult organism | 4.97e-08 | 114 |