FFCP PHASE1:Hg19::chr4:159690108..159690123,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:159690108..159690123,+
|short_description=p6@FNIP2
|description=CAGE_peak_6_at_FNIP2_5end
|association_with_transcript=-58bp_to_NM_020840,uc003iqd.2,uc003i...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57600 | |EntrezGene=57600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29280 | |HGNC=29280 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P278 | |UniProt=Q9P278 | ||
|association_with_transcript=-58bp_to_NM_020840,uc003iqd.2,uc003iqe.3_5end | |||
|cluster_id=chr4:159690108..159690123,+ | |||
|description=CAGE_peak_6_at_FNIP2_5end | |||
|id=chr4:159690108..159690123,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-19!42;CL:0000557!1.45e-16!71;CL:0000860!3.65e-16!45;CL:0002194!1.09e-15!63;CL:0000576!1.09e-15!63;CL:0000040!1.09e-15!63;CL:0000559!1.09e-15!63;CL:0000839!1.13e-15!70;CL:0002009!4.30e-15!65;CL:0000766!2.22e-13!76;CL:0000763!8.68e-09!112;CL:0000049!8.68e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.67e-15;33!CL:0002057;9.67e-15;33!CL:0000576;1.37e-12;48!CL:0000473;1.94e-12;39!CL:0000234;1.94e-12;39!CL:0000766;1.98e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.45e-22,42;CL:0002057,6.45e-22,42;CL:0000473,2.43e-21,48;CL:0000234,2.43e-21,48;CL:0002194,4.62e-20,59;CL:0000576,4.62e-20,59;CL:0000040,4.62e-20,59;CL:0000559,4.62e-20,59;CL:0000557,1.18e-19,67;CL:0000839,5.33e-19,66;CL:0002009,1.39e-18,61;CL:0000766,1.33e-17,72;CL:0000763,4.61e-11,108;CL:0000049,4.61e-11,108;CL:0002087,6.47e-08,115;CL:0000738,9.65e-08,136;CL:0002031,7.01e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.10e-17!86;UBERON:0002390!3.36e-16!102;UBERON:0003061!3.36e-16!102;UBERON:0002371!7.12e-16!80;UBERON:0002193!1.38e-14!112;UBERON:0007023!1.40e-13!115;UBERON:0004765!9.24e-13!101;UBERON:0001434!9.24e-13!101;UBERON:0002405!1.92e-10!115;UBERON:0000062!1.16e-09!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.30e-19,82;UBERON:0002390,4.99e-19,98;UBERON:0003061,4.99e-19,98;UBERON:0002371,1.78e-18,76;UBERON:0002193,1.36e-17,108;UBERON:0002405,4.20e-17,93;UBERON:0004765,1.27e-16,90;UBERON:0007023,6.69e-14,114;UBERON:0001434,1.36e-13,100 | |||
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| ||
|short_description=p6@FNIP2 | |||
}} | }} |
Latest revision as of 11:20, 16 September 2015
Short description: | p6@FNIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FNIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_NM_020840, uc003iqd.2, uc003iqe.3_5end |
EntrezGene: | FNIP2 |
HGNC: | 29280 |
UniProt: | Q9P278 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.45e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.45e-22 | 42 |
defensive cell | 2.43e-21 | 48 |
phagocyte | 2.43e-21 | 48 |
monopoietic cell | 4.62e-20 | 59 |
monocyte | 4.62e-20 | 59 |
monoblast | 4.62e-20 | 59 |
promonocyte | 4.62e-20 | 59 |
granulocyte monocyte progenitor cell | 1.18e-19 | 67 |
myeloid lineage restricted progenitor cell | 5.33e-19 | 66 |
macrophage dendritic cell progenitor | 1.39e-18 | 61 |
myeloid leukocyte | 1.33e-17 | 72 |
myeloid cell | 4.61e-11 | 108 |
common myeloid progenitor | 4.61e-11 | 108 |
nongranular leukocyte | 6.47e-08 | 115 |
leukocyte | 9.65e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 7.01e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.30e-19 | 82 |
hematopoietic system | 4.99e-19 | 98 |
blood island | 4.99e-19 | 98 |
bone marrow | 1.78e-18 | 76 |
hemolymphoid system | 1.36e-17 | 108 |
immune system | 4.20e-17 | 93 |
skeletal element | 1.27e-16 | 90 |
adult organism | 6.69e-14 | 114 |
skeletal system | 1.36e-13 | 100 |