FFCP PHASE1:Hg19::chr1:11908185..11908202,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4878 | |EntrezGene=4878 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7939 | |HGNC=7939 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBE8 | |UniProt=B0ZBE8 | ||
|association_with_transcript=199bp_to_ENST00000376476_5end | |association_with_transcript=199bp_to_ENST00000376476_5end | ||
|cluster_id=chr1:11908185..11908202,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_6_at_NPPA_5end | |description=CAGE_peak_6_at_NPPA_5end | ||
|id=chr1:11908185..11908202,- | |id=chr1:11908185..11908202,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;7.67e-18;2!CL:0000242;7.67e-18;2!CL:0000312;6.13e-08;5!CL:0000333;7.01e-08;5!CL:0000240;8.02e-07;6!CL:0000311;8.02e-07;6!CL:0000079;8.02e-07;6!CL:0000237;8.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.67e-18,2;CL:0000312,6.13e-08,5;CL:0000240,8.02e-07,6;CL:0000311,8.02e-07,6;CL:0000079,8.02e-07,6;CL:0000237,8.02e-07,6;CL:0000036,8.02e-07,6;CL:0000357,8.02e-07,6;CL:0000114,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.58e-34;1!CL:0000357;8.02e-07;6!CL:0000114;8.02e-07;6 | |||
|ontology_enrichment_disease=DOID:3119!3.78e-07!14 | |ontology_enrichment_disease=DOID:3119!3.78e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;2.19e-10;14!DOID:5409;1.12e-09;4!DOID:169;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.19e-10,14;DOID:5409,1.12e-09,4;DOID:169,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-17!94;UBERON:0001016!1.20e-17!94;UBERON:0001950!2.07e-16!20;UBERON:0001017!2.35e-16!82;UBERON:0005743!1.88e-15!86;UBERON:0002619!6.95e-15!22;UBERON:0002020!1.14e-14!34;UBERON:0003528!1.14e-14!34;UBERON:0001893!1.23e-14!34;UBERON:0002780!1.60e-14!41;UBERON:0001890!1.60e-14!41;UBERON:0006240!1.60e-14!41;UBERON:0003080!3.87e-14!42;UBERON:0001049!3.88e-14!57;UBERON:0005068!3.88e-14!57;UBERON:0006241!3.88e-14!57;UBERON:0007135!3.88e-14!57;UBERON:0002616!1.39e-13!59;UBERON:0000955!4.39e-13!69;UBERON:0006238!4.39e-13!69;UBERON:0000956!4.91e-13!25;UBERON:0000203!4.91e-13!25;UBERON:0001869!1.24e-12!32;UBERON:0002791!2.91e-12!33;UBERON:0001871!7.62e-12!7;UBERON:0007023!4.50e-11!115;UBERON:0003075!3.97e-10!86;UBERON:0007284!3.97e-10!86;UBERON:0002346!1.46e-09!90;UBERON:0004121!2.12e-09!169;UBERON:0004151!3.34e-09!3;UBERON:0003056!3.37e-09!61;UBERON:0000924!4.29e-09!173;UBERON:0006601!4.29e-09!173;UBERON:0000200!5.62e-09!6;UBERON:0006331!1.34e-08!3;UBERON:0000988!1.39e-08!3;UBERON:0002079!1.54e-07!1;UBERON:0002084!1.63e-07!1;UBERON:0002082!1.63e-07!1;UBERON:0004706!1.63e-07!1;UBERON:0002022!3.85e-07!1;UBERON:0002038!4.34e-07!1;UBERON:0009661!4.34e-07!1;UBERON:0002298!5.40e-07!8;UBERON:0007190!6.57e-07!1;UBERON:0002581!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.01e-08;5!UBERON:0002410;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.01e-08,5;UBERON:0002410,7.01e-08,5 | |||
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|short_description=p6@NPPA | |short_description=p6@NPPA | ||
}} | }} |
Latest revision as of 11:19, 16 September 2015
Short description: | p6@NPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NPPA_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | 199bp_to_ENST00000376476_5end |
EntrezGene: | NPPA |
HGNC: | 7939 |
UniProt: | B0ZBE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.67e-18 | 2 |
keratinocyte | 6.13e-08 | 5 |
stratified squamous epithelial cell | 8.02e-07 | 6 |
keratin accumulating cell | 8.02e-07 | 6 |
stratified epithelial cell | 8.02e-07 | 6 |
keratinizing barrier epithelial cell | 8.02e-07 | 6 |
epithelial fate stem cell | 8.02e-07 | 6 |
stratified epithelial stem cell | 8.02e-07 | 6 |
surface ectodermal cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.01e-08 | 5 |
autonomic nervous system | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.19e-10 | 14 |
lung small cell carcinoma | 1.12e-09 | 4 |
neuroendocrine tumor | 8.97e-07 | 6 |