FFCP PHASE1:Hg19::chr20:43990576..43990596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90196 | |EntrezGene=90196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16162 | |HGNC=16162 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2H4,E7ETM6 | |UniProt=Q8N2H4,E7ETM6 | ||
|association_with_transcript=0bp_to_ENST00000372727,ENST00000414310,NM_001197129_5end | |||
|cluster_id=chr20:43990576..43990596,+ | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_4_at_SYS1_5end | |||
|id=chr20:43990576..43990596,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.48e-42!112;CL:0000049!1.48e-42!112;CL:0000557!5.14e-40!71;CL:0002009!2.74e-38!65;CL:0000839!3.02e-36!70;CL:0002194!3.36e-35!63;CL:0000576!3.36e-35!63;CL:0000040!3.36e-35!63;CL:0000559!3.36e-35!63;CL:0000766!3.16e-34!76;CL:0000037!2.29e-26!172;CL:0000566!2.29e-26!172;CL:0002032!1.09e-24!165;CL:0000837!1.09e-24!165;CL:0000988!5.49e-24!182;CL:0000738!5.88e-19!140;CL:0002031!1.37e-18!124;CL:0002057!3.43e-17!42;CL:0002087!2.26e-16!119;CL:0000860!1.28e-15!45;CL:0000840!3.34e-09!5;CL:0001029!3.34e-09!5;CL:0000990!4.58e-08!8;CL:0000235!5.57e-08!10;CL:0002619!1.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.49e-43;6!CL:0000473;3.47e-22;39!CL:0000234;3.47e-22;39!CL:0002619;4.67e-22;3!CL:0000840;8.84e-19;5!CL:0000576;7.18e-16;48!CL:0000766;4.17e-14;69!CL:0000763;1.33e-12;100!CL:0000990;1.38e-12;8!CL:0000451;2.52e-10;10!CL:0000860;5.81e-08;33!CL:0002057;5.81e-08;33!CL:0000738;2.21e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,8.36e-55,61;CL:0002194,1.15e-51,59;CL:0000576,1.15e-51,59;CL:0000040,1.15e-51,59;CL:0000559,1.15e-51,59;CL:0000557,1.32e-49,67;CL:0000839,7.56e-46,66;CL:0000235,3.63e-43,6;CL:0000763,8.68e-42,108;CL:0000049,8.68e-42,108;CL:0000766,9.51e-42,72;CL:0002032,1.22e-26,161;CL:0000837,1.22e-26,161;CL:0002031,4.83e-26,120;CL:0000037,2.39e-25,168;CL:0002087,9.34e-25,115;CL:0000988,7.81e-24,177;CL:0000738,1.67e-22,136;CL:0002619,4.68e-22,3;CL:0000473,6.88e-22,48;CL:0000234,6.88e-22,48;CL:0000840,1.25e-18,5;CL:0001029,1.25e-18,5;CL:0000990,1.73e-12,8;CL:0000451,3.02e-10,10;CL:0000134,1.39e-09,354;CL:0002320,2.64e-09,361;CL:0000219,2.56e-08,386;CL:0000048,4.16e-07,427;CL:0000860,5.60e-07,42;CL:0002057,5.60e-07,42;CL:0000723,6.12e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000049;9.67e-16;108!UBERON:0005425;4.72e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!2.84e-11!31;DOID:1240!3.66e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.67e-09;31!DOID:1240;4.21e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.15e-10,31;DOID:1240,7.26e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.43e-36!80;UBERON:0001474!1.43e-32!86;UBERON:0002390!2.51e-31!102;UBERON:0003061!2.51e-31!102;UBERON:0002193!7.77e-29!112;UBERON:0002405!2.37e-26!115;UBERON:0004765!8.08e-26!101;UBERON:0001434!8.08e-26!101;UBERON:0002204!2.99e-12!167;UBERON:0003081!7.94e-12!216;UBERON:0007023!5.39e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.59e-08;1!UBERON:0006518;2.59e-08;1!UBERON:0008949;2.59e-08;1!UBERON:0000101;2.59e-08;1!UBERON:0002167;2.59e-08;1!UBERON:0000941;4.72e-08;1!UBERON:0001785;4.72e-08;1!UBERON:0002464;4.72e-08;1!UBERON:0004904;4.72e-08;1!UBERON:0001021;4.72e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-43,76;UBERON:0001474,6.83e-40,82;UBERON:0004765,5.11e-36,90;UBERON:0002405,9.81e-35,93;UBERON:0002390,9.08e-33,98;UBERON:0003061,9.08e-33,98;UBERON:0001434,4.90e-32,100;UBERON:0002193,2.24e-29,108;UBERON:0002204,1.47e-17,167;UBERON:0003081,1.08e-13,203;UBERON:0002384,6.36e-09,371;UBERON:0002171,2.33e-08,1;UBERON:0006518,2.33e-08,1;UBERON:0008949,2.33e-08,1;UBERON:0000101,2.33e-08,1;UBERON:0002167,2.33e-08,1;UBERON:0000941,4.72e-08,1;UBERON:0001785,4.72e-08,1;UBERON:0002464,4.72e-08,1;UBERON:0004904,4.72e-08,1;UBERON:0001021,4.72e-08,1;UBERON:0003902,4.72e-08,1;UBERON:0005425,4.72e-08,1;UBERON:0000926,2.76e-07,315;UBERON:0004120,2.76e-07,315;UBERON:0006603,2.76e-07,315 | |||
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| ||
|short_description=p4@SYS1 | |||
}} | }} |
Latest revision as of 11:17, 16 September 2015
Short description: | p4@SYS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYS1_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 0bp_to_ENST00000372727, ENST00000414310, NM_001197129_5end |
EntrezGene: | SYS1 |
HGNC: | 16162 |
UniProt: | Q8N2H4E7ETM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-43 | 76 |
bone element | 6.83e-40 | 82 |
skeletal element | 5.11e-36 | 90 |
immune system | 9.81e-35 | 93 |
hematopoietic system | 9.08e-33 | 98 |
blood island | 9.08e-33 | 98 |
skeletal system | 4.90e-32 | 100 |
hemolymphoid system | 2.24e-29 | 108 |
musculoskeletal system | 1.47e-17 | 167 |
lateral plate mesoderm | 1.08e-13 | 203 |
connective tissue | 6.36e-09 | 371 |
lower lobe of right lung | 2.33e-08 | 1 |
right lung lobe | 2.33e-08 | 1 |
lower lobe of lung | 2.33e-08 | 1 |
lobe of lung | 2.33e-08 | 1 |
right lung | 2.33e-08 | 1 |
cranial nerve II | 4.72e-08 | 1 |
cranial nerve | 4.72e-08 | 1 |
nerve trunk | 4.72e-08 | 1 |
nerve connecting eye with brain | 4.72e-08 | 1 |
nerve | 4.72e-08 | 1 |
retinal neural layer | 4.72e-08 | 1 |
presumptive neural retina | 4.72e-08 | 1 |
mesoderm | 2.76e-07 | 315 |
mesoderm-derived structure | 2.76e-07 | 315 |
presumptive mesoderm | 2.76e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.15e-10 | 31 |
leukemia | 7.26e-08 | 39 |