FFCP PHASE1:Hg19::chrX:75648162..75648175,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57692 | |EntrezGene=57692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24934 | |HGNC=24934 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCI5 | |UniProt=Q9HCI5 | ||
|association_with_transcript=45bp_to_uc004ecm.1_5end | |association_with_transcript=45bp_to_uc004ecm.1_5end | ||
|cluster_id=chrX:75648162..75648175,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_MAGEE1_5end | |description=CAGE_peak_2_at_MAGEE1_5end | ||
|id=chrX:75648162..75648175,+ | |id=chrX:75648162..75648175,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.49e-10!18;CL:0000789!3.49e-10!18;CL:0002420!3.49e-10!18;CL:0002419!3.49e-10!18;CL:0000790!3.49e-10!18;CL:0000624!4.93e-08!6;CL:0000084!2.56e-07!25;CL:0000827!2.56e-07!25 | |ontology_enrichment_celltype=CL:0000791!3.49e-10!18;CL:0000789!3.49e-10!18;CL:0002420!3.49e-10!18;CL:0002419!3.49e-10!18;CL:0000790!3.49e-10!18;CL:0000624!4.93e-08!6;CL:0000084!2.56e-07!25;CL:0000827!2.56e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.00e-08;18!CL:0000789;5.00e-08;18!CL:0002419;5.00e-08;18!CL:0000624;5.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.45e-08,18;CL:0000789,3.45e-08,18;CL:0002420,3.45e-08,18;CL:0002419,3.45e-08,18;CL:0000790,3.45e-08,18;CL:0000624,4.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.43e-11;82!UBERON:0010122;6.55e-10;2!CL:0000790;5.00e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;7.37e-59;22!UBERON:0001869;3.22e-58;32!UBERON:0003528;8.65e-58;34!UBERON:0002020;8.65e-58;34!UBERON:0001893;1.97e-55;34!UBERON:0002791;1.55e-53;32!UBERON:0000956;1.45e-51;25!UBERON:0000203;1.45e-51;25!UBERON:0001950;3.06e-51;20!UBERON:0002780;1.25e-37;41!UBERON:0001890;1.25e-37;41!UBERON:0000073;3.26e-28;53!UBERON:0002616;3.26e-28;53!UBERON:0001872;9.43e-23;5!UBERON:0000955;1.82e-22;68!UBERON:0000349;1.17e-21;5!UBERON:0001017;3.14e-20;75!UBERON:0000369;1.93e-18;4!UBERON:0002435;1.93e-18;4!UBERON:0000204;1.93e-18;4!UBERON:0002420;2.61e-17;9!UBERON:0000125;2.61e-17;9!UBERON:0007245;2.61e-17;9!UBERON:0002308;2.61e-17;9!UBERON:0010009;2.61e-17;9!UBERON:0010011;2.61e-17;9!UBERON:0000454;2.61e-17;9!UBERON:0002021;3.45e-15;5!UBERON:0001016;7.85e-15;83!UBERON:0005383;3.49e-14;3!UBERON:0005382;3.49e-14;3!UBERON:0000988;1.71e-13;3!UBERON:0000200;2.03e-12;6!UBERON:0002298;1.18e-11;6!UBERON:0009663;1.40e-10;7!UBERON:0001871;2.87e-10;6!UBERON:0001873;6.55e-10;2!UBERON:0001876;1.45e-09;2!UBERON:0001954;1.45e-09;2!UBERON:0002148;1.45e-09;2!UBERON:0006331;1.45e-09;2!UBERON:0009662;1.45e-09;2!UBERON:0003022;1.45e-09;2!UBERON:0002421;1.45e-09;2!UBERON:0002600;1.45e-09;2!UBERON:0007023;7.67e-09;114!UBERON:0011216;6.77e-07;132!UBERON:0001870;7.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.22e-68,34;UBERON:0002020,4.22e-68,34;UBERON:0001869,6.03e-67,32;UBERON:0001893,8.46e-63,34;UBERON:0002791,5.98e-61,32;UBERON:0002619,2.83e-59,22;UBERON:0000073,3.57e-54,53;UBERON:0002616,3.57e-54,53;UBERON:0000956,6.25e-52,25;UBERON:0000203,6.25e-52,25;UBERON:0001950,1.43e-51,20;UBERON:0002780,2.15e-51,41;UBERON:0001890,2.15e-51,41;UBERON:0003080,2.15e-51,41;UBERON:0006240,2.15e-51,41;UBERON:0000955,3.74e-51,68;UBERON:0006238,3.74e-51,68;UBERON:0001049,5.54e-51,56;UBERON:0005068,5.54e-51,56;UBERON:0006241,5.54e-51,56;UBERON:0007135,5.54e-51,56;UBERON:0001017,2.92e-45,81;UBERON:0001016,3.96e-40,89;UBERON:0003056,5.29e-33,61;UBERON:0003075,5.44e-33,82;UBERON:0007284,5.44e-33,82;UBERON:0002346,3.54e-31,86;UBERON:0007023,1.64e-26,114;UBERON:0010371,9.88e-25,104;UBERON:0001872,1.12e-22,5;UBERON:0000349,3.71e-22,5;UBERON:0010314,8.72e-20,132;UBERON:0000369,1.71e-18,4;UBERON:0002435,1.71e-18,4;UBERON:0000204,1.71e-18,4;UBERON:0010082,1.71e-18,4;UBERON:0004121,7.84e-18,171;UBERON:0000924,7.84e-18,171;UBERON:0006601,7.84e-18,171;UBERON:0002420,1.24e-17,9;UBERON:0007245,1.24e-17,9;UBERON:0010009,1.24e-17,9;UBERON:0010011,1.24e-17,9;UBERON:0000454,1.24e-17,9;UBERON:0000125,3.31e-17,9;UBERON:0002308,3.31e-17,9;UBERON:0011216,2.57e-15,223;UBERON:0002021,4.39e-15,5;UBERON:0005383,2.88e-14,3;UBERON:0005382,2.88e-14,3;UBERON:0000988,1.61e-13,3;UBERON:0000200,2.90e-12,6;UBERON:0002298,1.09e-11,6;UBERON:0009663,1.31e-10,7;UBERON:0000025,1.35e-10,192;UBERON:0001871,1.81e-10,6;UBERON:0001876,5.26e-10,2;UBERON:0001873,5.50e-10,2;UBERON:0010122,5.50e-10,2;UBERON:0001954,1.17e-09,2;UBERON:0003022,1.17e-09,2;UBERON:0002421,1.17e-09,2;UBERON:0002600,1.17e-09,2;UBERON:0002148,2.35e-09,2;UBERON:0006331,2.35e-09,2;UBERON:0009662,2.35e-09,2;UBERON:0004111,2.70e-07,240;UBERON:0001870,6.56e-07,3 | |||
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|short_description=p2@MAGEE1 | |short_description=p2@MAGEE1 | ||
}} | }} |
Latest revision as of 11:14, 16 September 2015
Short description: | p2@MAGEE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAGEE1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 45bp_to_uc004ecm.1_5end |
EntrezGene: | MAGEE1 |
HGNC: | 24934 |
UniProt: | Q9HCI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.45e-08 | 18 |
alpha-beta T cell | 3.45e-08 | 18 |
immature T cell | 3.45e-08 | 18 |
mature T cell | 3.45e-08 | 18 |
immature alpha-beta T cell | 3.45e-08 | 18 |
CD4-positive, alpha-beta T cell | 4.95e-07 | 6 |