FFCP PHASE1:Hg19::chr9:138853156..138853246,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:138853156..138853246,-
|short_description=p1@UBAC1
|description=CAGE_peak_1_at_UBAC1_5end
|association_with_transcript=0bp_to_ENST00000371756,NM_016172,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10422 | |EntrezGene=10422 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30221 | |HGNC=30221 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSL1 | |UniProt=Q9BSL1 | ||
|association_with_transcript=0bp_to_ENST00000371756,NM_016172,uc004cgs.1,uc004cgt.2,uc004cgu.2_5end | |||
|cluster_id=chr9:138853156..138853246,- | |||
|description=CAGE_peak_1_at_UBAC1_5end | |||
|id=chr9:138853156..138853246,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.83e-13!94;UBERON:0001016!3.83e-13!94;UBERON:0001017!3.84e-13!82;UBERON:0001049!8.70e-13!57;UBERON:0005068!8.70e-13!57;UBERON:0006241!8.70e-13!57;UBERON:0007135!8.70e-13!57;UBERON:0003075!9.59e-13!86;UBERON:0007284!9.59e-13!86;UBERON:0002346!2.36e-12!90;UBERON:0005743!3.99e-12!86;UBERON:0000955!3.78e-11!69;UBERON:0006238!3.78e-11!69;UBERON:0004121!8.85e-11!169;UBERON:0002020!1.05e-10!34;UBERON:0003528!1.05e-10!34;UBERON:0002616!1.09e-10!59;UBERON:0000924!1.19e-10!173;UBERON:0006601!1.19e-10!173;UBERON:0001893!1.34e-10!34;UBERON:0002791!3.43e-10!33;UBERON:0002780!5.34e-10!41;UBERON:0001890!5.34e-10!41;UBERON:0006240!5.34e-10!41;UBERON:0001869!7.67e-10!32;UBERON:0003056!1.25e-09!61;UBERON:0003080!1.31e-09!42;UBERON:0007023!1.71e-08!115;UBERON:0000033!1.93e-08!123;UBERON:0000153!7.20e-08!129;UBERON:0007811!7.20e-08!129;UBERON:0000956!8.31e-08!25;UBERON:0000203!8.31e-08!25;UBERON:0002619!1.00e-07!22;UBERON:0001950!3.98e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.32e-09;34!UBERON:0003528;3.80e-09;34!UBERON:0002020;3.80e-09;34!UBERON:0002791;7.00e-09;32!UBERON:0001869;8.09e-09;32!UBERON:0000073;6.64e-08;53!UBERON:0002616;6.64e-08;53!UBERON:0000956;8.22e-08;25!UBERON:0000203;8.22e-08;25!UBERON:0002619;9.72e-08;22!UBERON:0002780;1.54e-07;41!UBERON:0001890;1.54e-07;41!UBERON:0001950;3.97e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.90e-14,89;UBERON:0003075,1.69e-13,82;UBERON:0007284,1.69e-13,82;UBERON:0001017,1.90e-13,81;UBERON:0001049,3.50e-13,56;UBERON:0005068,3.50e-13,56;UBERON:0006241,3.50e-13,56;UBERON:0007135,3.50e-13,56;UBERON:0002346,4.66e-13,86;UBERON:0000073,1.80e-12,53;UBERON:0002616,1.80e-12,53;UBERON:0000955,1.88e-11,68;UBERON:0006238,1.88e-11,68;UBERON:0010371,2.49e-11,104;UBERON:0004121,5.87e-11,171;UBERON:0000924,5.87e-11,171;UBERON:0006601,5.87e-11,171;UBERON:0003528,1.05e-10,34;UBERON:0002020,1.05e-10,34;UBERON:0001893,1.34e-10,34;UBERON:0003056,2.54e-10,61;UBERON:0002780,5.34e-10,41;UBERON:0001890,5.34e-10,41;UBERON:0003080,5.34e-10,41;UBERON:0006240,5.34e-10,41;UBERON:0002791,6.63e-10,32;UBERON:0001869,7.67e-10,32;UBERON:0007023,3.79e-08,114;UBERON:0000956,8.31e-08,25;UBERON:0000203,8.31e-08,25;UBERON:0002619,1.00e-07,22;UBERON:0001950,3.98e-07,20 | |||
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58082 | ||
|short_description=p1@UBAC1 | |||
}} | }} |
Latest revision as of 11:10, 16 September 2015
Short description: | p1@UBAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBAC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371756, NM_016172, uc004cgs.1, uc004cgt.2, uc004cgu.2_5end |
EntrezGene: | UBAC1 |
HGNC: | 30221 |
UniProt: | Q9BSL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.90e-14 | 89 |
neural plate | 1.69e-13 | 82 |
presumptive neural plate | 1.69e-13 | 82 |
central nervous system | 1.90e-13 | 81 |
neural tube | 3.50e-13 | 56 |
neural rod | 3.50e-13 | 56 |
future spinal cord | 3.50e-13 | 56 |
neural keel | 3.50e-13 | 56 |
neurectoderm | 4.66e-13 | 86 |
regional part of nervous system | 1.80e-12 | 53 |
regional part of brain | 1.80e-12 | 53 |
brain | 1.88e-11 | 68 |
future brain | 1.88e-11 | 68 |
ecto-epithelium | 2.49e-11 | 104 |
ectoderm-derived structure | 5.87e-11 | 171 |
ectoderm | 5.87e-11 | 171 |
presumptive ectoderm | 5.87e-11 | 171 |
brain grey matter | 1.05e-10 | 34 |
gray matter | 1.05e-10 | 34 |
telencephalon | 1.34e-10 | 34 |
pre-chordal neural plate | 2.54e-10 | 61 |
regional part of forebrain | 5.34e-10 | 41 |
forebrain | 5.34e-10 | 41 |
anterior neural tube | 5.34e-10 | 41 |
future forebrain | 5.34e-10 | 41 |
regional part of telencephalon | 6.63e-10 | 32 |
cerebral hemisphere | 7.67e-10 | 32 |
adult organism | 3.79e-08 | 114 |
cerebral cortex | 8.31e-08 | 25 |
pallium | 8.31e-08 | 25 |
regional part of cerebral cortex | 1.00e-07 | 22 |
neocortex | 3.98e-07 | 20 |