FFCP PHASE1:Hg19::chr13:108922478..108922493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10673 | |EntrezGene=10673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |HGNC=11929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_ENST00000479435_5end | |association_with_transcript=-81bp_to_ENST00000479435_5end | ||
|cluster_id=chr13:108922478..108922493,+ | |||
|coexpression_cluster_id=C1186 | |||
|description=CAGE_peak_5_at_TNFSF13B_5end | |description=CAGE_peak_5_at_TNFSF13B_5end | ||
|id=chr13:108922478..108922493,+ | |id=chr13:108922478..108922493,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.95e-64!172;CL:0000566!8.95e-64!172;CL:0000763!2.33e-62!112;CL:0000049!2.33e-62!112;CL:0002032!5.48e-60!165;CL:0000837!5.48e-60!165;CL:0000988!1.54e-57!182;CL:0000738!1.12e-44!140;CL:0000766!3.23e-42!76;CL:0002194!3.30e-40!63;CL:0000576!3.30e-40!63;CL:0000040!3.30e-40!63;CL:0000559!3.30e-40!63;CL:0002009!5.46e-40!65;CL:0002087!2.59e-38!119;CL:0000557!1.12e-37!71;CL:0002057!1.35e-37!42;CL:0000839!4.09e-35!70;CL:0002031!4.85e-34!124;CL:0000860!8.47e-34!45;CL:0000134!4.54e-12!358;CL:0002320!4.03e-11!365;CL:0000219!2.77e-08!390;CL:0002393!5.29e-08!9;CL:0002397!5.29e-08!9;CL:0000451!5.45e-07!10 | |ontology_enrichment_celltype=CL:0000037!8.95e-64!172;CL:0000566!8.95e-64!172;CL:0000763!2.33e-62!112;CL:0000049!2.33e-62!112;CL:0002032!5.48e-60!165;CL:0000837!5.48e-60!165;CL:0000988!1.54e-57!182;CL:0000738!1.12e-44!140;CL:0000766!3.23e-42!76;CL:0002194!3.30e-40!63;CL:0000576!3.30e-40!63;CL:0000040!3.30e-40!63;CL:0000559!3.30e-40!63;CL:0002009!5.46e-40!65;CL:0002087!2.59e-38!119;CL:0000557!1.12e-37!71;CL:0002057!1.35e-37!42;CL:0000839!4.09e-35!70;CL:0002031!4.85e-34!124;CL:0000860!8.47e-34!45;CL:0000134!4.54e-12!358;CL:0002320!4.03e-11!365;CL:0000219!2.77e-08!390;CL:0002393!5.29e-08!9;CL:0002397!5.29e-08!9;CL:0000451!5.45e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-50;33!CL:0002057;1.50e-50;33!CL:0000473;9.56e-46;39!CL:0000234;9.56e-46;39!CL:0000576;1.30e-39;48!CL:0000766;1.34e-31;69!CL:0000763;4.39e-27;100!CL:0002087;3.16e-13;104!CL:0000738;1.56e-12;136!CL:0000988;1.99e-12;177!CL:0000094;6.99e-11;8!CL:0002393;1.01e-09;6!CL:0002397;1.01e-09;6!CL:0000990;1.57e-08;8!CL:0000081;1.48e-07;11!CL:0000451;9.00e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.56e-92,108;CL:0000049,2.56e-92,108;CL:0000037,1.58e-73,168;CL:0000473,2.06e-72,48;CL:0000234,2.06e-72,48;CL:0000766,2.31e-71,72;CL:0002032,4.89e-70,161;CL:0000837,4.89e-70,161;CL:0000988,1.60e-68,177;CL:0000860,4.75e-68,42;CL:0002057,4.75e-68,42;CL:0002009,1.18e-67,61;CL:0002194,1.36e-67,59;CL:0000576,1.36e-67,59;CL:0000040,1.36e-67,59;CL:0000559,1.36e-67,59;CL:0000557,4.74e-63,67;CL:0000839,8.61e-59,66;CL:0000738,5.77e-54,136;CL:0002087,4.72e-45,115;CL:0002031,2.66e-39,120;CL:0000134,7.27e-22,354;CL:0002320,5.72e-21,361;CL:0000219,7.93e-18,386;CL:0000034,1.01e-14,441;CL:0000048,5.04e-14,427;CL:0000723,1.67e-13,433;CL:0002393,2.15e-13,9;CL:0002397,2.15e-13,9;CL:0000094,5.04e-11,8;CL:0000990,1.65e-08,8;CL:0000081,1.18e-07,11;CL:0000451,9.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-48;42!CL:0000049;6.59e-27;108 | |||
|ontology_enrichment_disease=DOID:8692!6.58e-19!31;DOID:1240!6.42e-14!39;DOID:2531!1.50e-11!51;DOID:0060083!1.50e-11!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.60e-15;31!DOID:1240;8.01e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.65e-15,31;DOID:1240,5.32e-11,39;DOID:2531,2.68e-07,51;DOID:0060083,2.68e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.92e-41!102;UBERON:0003061!1.92e-41!102;UBERON:0002193!2.40e-37!112;UBERON:0002371!3.32e-33!80;UBERON:0001474!3.78e-29!86;UBERON:0004765!5.51e-23!101;UBERON:0001434!5.51e-23!101;UBERON:0002405!7.57e-23!115;UBERON:0002384!1.50e-10!375;UBERON:0007023!5.30e-09!115;UBERON:0002204!1.72e-08!167;UBERON:0003081!2.48e-08!216;UBERON:0000178!4.34e-08!15;UBERON:0000179!4.34e-08!15;UBERON:0000463!4.34e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-14;15!UBERON:0000179;1.50e-14;15!UBERON:0000463;1.50e-14;15!UBERON:0002390;2.15e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-64,98;UBERON:0003061,1.55e-64,98;UBERON:0002193,9.02e-59,108;UBERON:0002371,3.85e-56,76;UBERON:0001474,7.80e-51,82;UBERON:0004765,7.36e-45,90;UBERON:0002405,9.44e-45,93;UBERON:0001434,9.66e-39,100;UBERON:0003081,2.83e-21,203;UBERON:0002384,9.47e-20,371;UBERON:0002204,6.55e-17,167;UBERON:0000178,9.21e-15,15;UBERON:0000179,9.21e-15,15;UBERON:0000463,9.21e-15,15;UBERON:0000926,1.02e-07,315;UBERON:0004120,1.02e-07,315;UBERON:0006603,1.02e-07,315 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,2.54511827294832,3.38456359648821,1.57345710739562,1.91914699048606,1.54816123316076,0,0,0,0,0,4.40400659002271,1.66198622559563,2.20598892217156,2.17010870715852,1.34349284543955,0.647787332037959,0.515151135268373,2.4717700592526,3.02300754951048,4.60909716256851,3.48643555358527,2.46700732813095,3.40677007984614,13.8092348314632,7.42866048934392,10.6417003449863,5.17118521104928,4.51839278508678,5.41705946377367,3.20011977222428,1.36453075028923,2.69668181334102,5.20342617030534,2.56743221660875,5.75403413219137,18.8015241106428,12.9651377454061,18.7538890234385,8.9964863974861,2.8369261234557,2.4912889959823,8.54245461872927,7.82224377630302,7.8187984093842,19.3727840842678,11.0483290796269,15.5066569846033,4.01385043992689,3.18906449947565,1.88692780957538,3.59451619668784,5.55654503513573,8.51845609494525,1.71007646244749,2.18808344918999,1.64397738388171,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,2.24203425192614,3.95076127162616,0.196709770113833,0.393010762749165,0.616804496998528,0.334372990781356,1.30368906653436,0,3.89653456815823,0.445641827540694,1.47302953737419,1.55073726208535,4.60366568400527,0.128091319725675,1.8208308658383,1.47994114143309,2.76350017785848,0.869409257205157,0.741432815810302,0.267540828089713,1.04535523804977,0.793165398882963,0.383220493601921,1.03088233644789,4.30133476433155,0,0.651083453856419,0.950452044448374,1.05402583354441,0.511946444617674,0,0.710331756132051,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,2.43781632218974,1.19662164466979,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6273001846552,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,1.33768046059855,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,32.2073020297288,0,46.414537504836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.94142780736755,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,4.05958087385735,4.58782324285425,2.84823593587081,3.33524485640905,2.87953591160336,3.8908398671563,4.32025149790492,5.55187623405989,0,0,0.490080431962063,0,0,0,0,9.77938920020801,0.383010740264733,4.23347165447766,8.44017044713844,17.4094250430344,1.14117339516596,9.71415353792744,7.51903431270201,0,1.4452926759333,7.46658916606876,11.0720021799485,12.3661924112075,0.614481528616916,1.3420566473545,0.667396566847634,3.51698571723673,5.01131113011436,4.92349595790849,0,0.33307196799782,84.5922030527097,0.18714054040822,0,0,0.66866030566487,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,1.84627208191604,0,0,0,1.53471711068062,0,4.7896618469388,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.31396051279005,3.98908036560375,0.451191321234361,0.588187602953219,0.671286347903371,0.37950746544837,0.317873157960757,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,6.38732940334862,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.408610218334727,0,0,0,2.4747128070665,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.453248366080503,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0.628817220398664,1.24271716604159,2.48083010905975,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0.751145584238999,0,0.554645257684261,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,4.67664741214532,3.72021552877417,4.41626564490779,0,0,0,0.19998739585493,0.746842107858986,0.172214979660816,0,0,0,0,0,0,0.629063767423586,0,0.33946505990805,0,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0,0,0.207471757392654,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0.781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| ||
|short_description=p5@TNFSF13B | |short_description=p5@TNFSF13B | ||
}} | }} |
Latest revision as of 11:09, 16 September 2015
Short description: | p5@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | -81bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.55e-64 | 98 |
blood island | 1.55e-64 | 98 |
hemolymphoid system | 9.02e-59 | 108 |
bone marrow | 3.85e-56 | 76 |
bone element | 7.80e-51 | 82 |
skeletal element | 7.36e-45 | 90 |
immune system | 9.44e-45 | 93 |
skeletal system | 9.66e-39 | 100 |
lateral plate mesoderm | 2.83e-21 | 203 |
connective tissue | 9.47e-20 | 371 |
musculoskeletal system | 6.55e-17 | 167 |
blood | 9.21e-15 | 15 |
haemolymphatic fluid | 9.21e-15 | 15 |
organism substance | 9.21e-15 | 15 |
mesoderm | 1.02e-07 | 315 |
mesoderm-derived structure | 1.02e-07 | 315 |
presumptive mesoderm | 1.02e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.65e-15 | 31 |
leukemia | 5.32e-11 | 39 |
hematologic cancer | 2.68e-07 | 51 |
immune system cancer | 2.68e-07 | 51 |