FFCP PHASE1:Hg19::chr13:108922418..108922428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10673 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-146bp_to_ENST00000479435_5end | |||
|cluster_id=chr13:108922418..108922428,+ | |||
|coexpression_cluster_id=C1186 | |||
|description=CAGE_peak_7_at_TNFSF13B_5end | |||
|id=chr13:108922418..108922428,+ | |||
|ontology_enrichment_celltype=CL:0000763!7.78e-60!112;CL:0000049!7.78e-60!112;CL:0000037!1.22e-55!172;CL:0000566!1.22e-55!172;CL:0002194!3.05e-54!63;CL:0000576!3.05e-54!63;CL:0000040!3.05e-54!63;CL:0000559!3.05e-54!63;CL:0000766!6.12e-54!76;CL:0002009!7.40e-54!65;CL:0000988!1.04e-50!182;CL:0002032!1.88e-50!165;CL:0000837!1.88e-50!165;CL:0002057!5.75e-50!42;CL:0000557!9.70e-50!71;CL:0000738!2.82e-48!140;CL:0000839!9.03e-47!70;CL:0000860!1.63e-45!45;CL:0002087!1.79e-41!119;CL:0002031!8.74e-36!124;CL:0000134!2.04e-11!358;CL:0002320!1.12e-10!365;CL:0000451!2.44e-10!10;CL:0002393!3.48e-10!9;CL:0002397!3.48e-10!9;CL:0000219!1.67e-08!390;CL:0000990!2.79e-08!8;CL:0000048!5.19e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.74e-62;33!CL:0002057;9.74e-62;33!CL:0000473;3.07e-60;39!CL:0000234;3.07e-60;39!CL:0000576;6.89e-37;48!CL:0000766;1.95e-29;69!CL:0000763;1.14e-24;100!CL:0000738;2.19e-13;136!CL:0000235;1.13e-12;6!CL:0000988;3.87e-11;177!CL:0002087;7.34e-11;104!CL:0000094;1.07e-09;8!CL:0002393;5.84e-08;6!CL:0002397;5.84e-08;6!CL:0000771;2.27e-07;2!CL:0000081;6.02e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.18e-80,48;CL:0000234,2.18e-80,48;CL:0000763,6.20e-78,108;CL:0000049,6.20e-78,108;CL:0000766,4.46e-76,72;CL:0002194,1.84e-73,59;CL:0000576,1.84e-73,59;CL:0000040,1.84e-73,59;CL:0000559,1.84e-73,59;CL:0002009,9.55e-71,61;CL:0000860,9.23e-69,42;CL:0002057,9.23e-69,42;CL:0000557,4.05e-67,67;CL:0000839,1.14e-64,66;CL:0000037,5.32e-58,168;CL:0002032,1.74e-54,161;CL:0000837,1.74e-54,161;CL:0000988,2.20e-54,177;CL:0000738,2.58e-49,136;CL:0002087,4.87e-43,115;CL:0002031,7.89e-37,120;CL:0000134,1.84e-20,354;CL:0002320,8.44e-20,361;CL:0000219,1.81e-17,386;CL:0000048,1.79e-15,427;CL:0000723,4.57e-15,433;CL:0000034,1.53e-14,441;CL:0000235,1.29e-12,6;CL:0000094,1.01e-09,8;CL:0000771,1.88e-07,2;CL:0000081,5.80e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-48;42!CL:0000049;8.67e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.01e-49!102;UBERON:0003061!3.01e-49!102;UBERON:0002193!2.16e-45!112;UBERON:0002371!2.21e-43!80;UBERON:0001474!6.97e-39!86;UBERON:0002405!1.93e-32!115;UBERON:0004765!3.79e-31!101;UBERON:0001434!3.79e-31!101;UBERON:0003081!1.84e-15!216;UBERON:0002204!1.28e-14!167;UBERON:0002384!4.04e-10!375;UBERON:0007023!1.21e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.27e-58,76;UBERON:0001474,5.00e-53,82;UBERON:0002390,3.38e-52,98;UBERON:0003061,3.38e-52,98;UBERON:0004765,2.05e-47,90;UBERON:0002193,2.37e-46,108;UBERON:0002405,1.48e-45,93;UBERON:0001434,1.19e-41,100;UBERON:0002204,3.95e-22,167;UBERON:0003081,1.12e-20,203;UBERON:0002384,6.75e-19,371;UBERON:0000926,1.94e-09,315;UBERON:0004120,1.94e-09,315;UBERON:0006603,1.94e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.60468152070698,1.88831355734875,2.2826126580967,0,0.767658796194425,1.08371286321253,0,0,0,0,0,0.293600439334847,0.553995408531877,2.20598892217156,1.73608696572681,0.671746422719773,0.647787332037959,0.257575567634187,1.89017710413434,3.02300754951048,1.21292030593908,1.62700325833979,0.822335776043652,0.929119112685311,7.48000220037591,3.58624989140741,4.7296445977717,3.44745680736619,0.645484683583826,4.06279459783025,0.941211697713023,0.545812300115692,1.12361742222542,2.44867113896722,2.24650318953266,2.55734850319616,11.8746468067218,5.98390972864896,8.09827026012119,4.93355705668593,3.40431134814684,3.11411124497787,5.02497330513487,1.5644487552606,3.9093992046921,10.8971910474006,5.89244217580104,5.69632297393592,1.47878700418359,0.637812899895131,1.88692780957538,1.12328631146495,1.35159203557356,3.53596290733576,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.520237390239513,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.62273696827342,1.91542711029194,1.72845348674525,0.476981248610684,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,1.8720341211139,2.22946743433092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,6.32501818449095,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,2.99602809578873,0,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,1.94970791705028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,1.39705560002972,0.191505370132367,0.211673582723883,2.921597462471,2.80797178113459,0.912938716132769,1.41011906195721,0,0,0.963528450622197,2.62339619348362,3.40676990152261,5.49608551609224,0,0.223676107892416,0,0.976940477010201,1.39203086947621,0,0,0,9.86909035614947,0,0.439524537815682,0,0.222886768554957,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,1.38141957765574,0,0,0.615424027305347,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,2.55493176133945,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,2.72804432375144,0.664324201566815,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0.4226557275834,0,0.469919589899268,0.128915775947154,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0.961705476909699 | |||
|short_description=p7@TNFSF13B | |||
}} |
Latest revision as of 11:07, 16 September 2015
Short description: | p7@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | -146bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.18e-80 | 48 |
phagocyte | 2.18e-80 | 48 |
myeloid cell | 6.20e-78 | 108 |
common myeloid progenitor | 6.20e-78 | 108 |
myeloid leukocyte | 4.46e-76 | 72 |
monopoietic cell | 1.84e-73 | 59 |
monocyte | 1.84e-73 | 59 |
monoblast | 1.84e-73 | 59 |
promonocyte | 1.84e-73 | 59 |
macrophage dendritic cell progenitor | 9.55e-71 | 61 |
classical monocyte | 9.23e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.23e-69 | 42 |
granulocyte monocyte progenitor cell | 4.05e-67 | 67 |
myeloid lineage restricted progenitor cell | 1.14e-64 | 66 |
hematopoietic stem cell | 5.32e-58 | 168 |
hematopoietic oligopotent progenitor cell | 1.74e-54 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-54 | 161 |
hematopoietic cell | 2.20e-54 | 177 |
leukocyte | 2.58e-49 | 136 |
nongranular leukocyte | 4.87e-43 | 115 |
hematopoietic lineage restricted progenitor cell | 7.89e-37 | 120 |
mesenchymal cell | 1.84e-20 | 354 |
connective tissue cell | 8.44e-20 | 361 |
motile cell | 1.81e-17 | 386 |
multi fate stem cell | 1.79e-15 | 427 |
somatic stem cell | 4.57e-15 | 433 |
stem cell | 1.53e-14 | 441 |
macrophage | 1.29e-12 | 6 |
granulocyte | 1.01e-09 | 8 |
eosinophil | 1.88e-07 | 2 |
blood cell | 5.80e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.27e-58 | 76 |
bone element | 5.00e-53 | 82 |
hematopoietic system | 3.38e-52 | 98 |
blood island | 3.38e-52 | 98 |
skeletal element | 2.05e-47 | 90 |
hemolymphoid system | 2.37e-46 | 108 |
immune system | 1.48e-45 | 93 |
skeletal system | 1.19e-41 | 100 |
musculoskeletal system | 3.95e-22 | 167 |
lateral plate mesoderm | 1.12e-20 | 203 |
connective tissue | 6.75e-19 | 371 |
mesoderm | 1.94e-09 | 315 |
mesoderm-derived structure | 1.94e-09 | 315 |
presumptive mesoderm | 1.94e-09 | 315 |