FFCP PHASE1:Hg19::chr3:160823187..160823206,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=918 | |||
|TSSclassifier=strong | |||
|UniProt=C9JXR0 | |||
|association_with_transcript=-15bp_to_ENST00000476999,ENST00000494173,ENST00000496295_5end | |||
|cluster_id=chr3:160823187..160823206,- | |||
|description=CAGE_peak_4_at_B3GALNT1_5end | |||
|id=chr3:160823187..160823206,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.55e-10;3!CL:0002319;1.44e-07;25!CL:0000047;5.18e-07;2!CL:1000415;5.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.64e-10,3;CL:0002319,8.23e-08,25;CL:1000415,3.47e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.59e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.45e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.36e-19!86;UBERON:0001017!2.05e-18!82;UBERON:0000073!3.77e-18!94;UBERON:0001016!3.77e-18!94;UBERON:0001049!1.04e-17!57;UBERON:0005068!1.04e-17!57;UBERON:0006241!1.04e-17!57;UBERON:0007135!1.04e-17!57;UBERON:0003075!2.85e-17!86;UBERON:0007284!2.85e-17!86;UBERON:0002346!8.71e-17!90;UBERON:0002780!3.15e-16!41;UBERON:0001890!3.15e-16!41;UBERON:0006240!3.15e-16!41;UBERON:0003080!1.76e-15!42;UBERON:0002616!3.87e-15!59;UBERON:0004121!4.73e-15!169;UBERON:0000924!6.58e-15!173;UBERON:0006601!6.58e-15!173;UBERON:0003056!9.02e-15!61;UBERON:0000955!1.45e-14!69;UBERON:0006238!1.45e-14!69;UBERON:0002020!2.58e-14!34;UBERON:0003528!2.58e-14!34;UBERON:0001893!2.73e-14!34;UBERON:0002791!1.03e-13!33;UBERON:0001869!1.54e-13!32;UBERON:0000483!4.13e-12!309;UBERON:0000033!8.99e-12!123;UBERON:0000956!1.19e-11!25;UBERON:0000203!1.19e-11!25;UBERON:0000119!1.43e-11!312;UBERON:0000153!1.79e-11!129;UBERON:0007811!1.79e-11!129;UBERON:0007023!5.43e-10!115;UBERON:0002619!1.46e-09!22;UBERON:0000468!3.15e-09!659;UBERON:0000475!4.39e-09!365;UBERON:0001950!1.28e-08!20;UBERON:0000481!1.43e-08!347;UBERON:0000477!4.38e-08!286;UBERON:0000025!6.63e-08!194;UBERON:0000922!8.15e-08!612;UBERON:0000064!3.99e-07!219;UBERON:0004111!5.24e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.29e-08;25!UBERON:0000203;2.29e-08;25!UBERON:0000922;2.60e-08;49!UBERON:0007100;1.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.14e-09,171;UBERON:0000924,2.14e-09,171;UBERON:0006601,2.14e-09,171;UBERON:0000956,3.00e-08,25;UBERON:0000203,3.00e-08,25;UBERON:0010371,5.43e-08,104;UBERON:0001017,9.79e-08,81;UBERON:0001016,1.62e-07,89;UBERON:0003075,5.59e-07,82;UBERON:0007284,5.59e-07,82;UBERON:0007100,6.55e-07,27;UBERON:0003056,8.31e-07,61 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0.247532705920093,0,0,0.602694528023977,0,0.487932798790507,0.369363174230364,0.204000691244253,0,2.28988789704845,1.50561867580173,1.88313959392204,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.869079113764942,0,0,1.98523116044542,0.886917589850256,1.40535657109002,0.458426764241994,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0.149448680551801,0.352303495931295,0.485618833104395,0.842704840213491,0.408308342509787,0.491337269247072,0,0,0,0,0,0.336672227908132,0.500474079487857,0.554128230968366,0.438977620880838,0,0,0.340296549480063,0.358779271377724,0.640672166455702,0,0,0.721367704669072,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0.243947412259191,0.397589304964456,0.813357600086629,0.621966330092223,1.26160425437814,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0.590789906681404,0,0.983907508344908,0.343135620597051,0,1.1240175325762,0,0.0925884451585296,0,0,2.88662684050547,2.66639931442677,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,1.52456774533478,1.30139853857622,0.773288812777695,1.84267891867784,1.91381625495949,0,0,0,0.981531933753119,0,0.542530047399471,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.348631135379878,0.604297247958111,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0.895499018888713,0,0,0.769350375349168,0,0.976135183992909,0.103041011647722,2.28923662045859,1.98022799809411,0,0,0,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.445160178233687,0,0,0.510450849978337,0,0,0.31481234683064,2.0911118104818,0,0,0.869932992075073,0,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0.974853958525138,0,0,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0.717056761020258,0.196498082026242,0,0.354761064070598,0,0.987884678879706,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0.191505370132367,0,0.649243880549111,1.68478306868075,0,0,0,0,0,0.403599414382095,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0.593929361665277,0.614321404198464,0,1.1253553312841,0.667852230137435,0,0.844501632511974,0.19924798825107,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.649376687132959,1.99613798001194,3.38556089410803,1.57427999993152,0,0.682760689712998,0.254253650292766,0,0,0,0.520874984799877,0.885741385813839,0.723578631752448,0,0.663475559587348,0.591095237907095,1.31631238292384,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,1.09886179476517,0.332423363800313,0,0,0,0,0.317873157960757,0.210998064528027,0.652931232636591,0.706765357169704,0,0,0,0,0,0,0,0.606610196826093,0,0.702793337176017,0,0.586993856796269,0,0.789168805698781,1.20990716048664,0.91821828489147,0.568679216656392,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.687944129886466,0,0,0,0.290967049465258,0.176512253383001,1.80784592624426,0,0,1.07628353124994,1.36885967914362,1.84365286578528,0,0,0.144090417154106,0.229073192331831,2.74551996579143,0,0.49701014226173,0.471388069233591,0.135904206073614,0.104602846312333,0,1.73370353940911,0,0.273810757783986,2.55493176133945,0,0,2.79282401272254,3.43740636017525,0,2.59582700648688,5.57993862577542,9.59637267000052,5.84496210634518,0,5.82479747637269,0,0,0,0.885847333632739,0,0.795229689809303,0.681017030557878,0.160753148465019,0,0,0,0.77380195455795,0.91124334987037,0,0.630445658393585,0.996637174564964,0.105600336519406,0,0.959575986597226,2.1440859791201,4.63464379255802,0,0.542999601753713,0,0,0,0.164185041498678,0,0.566560457600628,0,0,0.646414781807753,0.92562821219883,0,0,0.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| |||
|short_description=p4@B3GALNT1 | |||
}} |
Latest revision as of 11:06, 16 September 2015
Short description: | p4@B3GALNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_B3GALNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000476999, ENST00000494173, ENST00000496295_5end |
EntrezGene: | B3GALNT1 |
HGNC: | 918 |
UniProt: | C9JXR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.64e-10 | 3 |
neural cell | 8.23e-08 | 25 |
epithelial cell of gall bladder | 3.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.14e-09 | 171 |
ectoderm | 2.14e-09 | 171 |
presumptive ectoderm | 2.14e-09 | 171 |
cerebral cortex | 3.00e-08 | 25 |
pallium | 3.00e-08 | 25 |
ecto-epithelium | 5.43e-08 | 104 |
central nervous system | 9.79e-08 | 81 |
nervous system | 1.62e-07 | 89 |
neural plate | 5.59e-07 | 82 |
presumptive neural plate | 5.59e-07 | 82 |
primary circulatory organ | 6.55e-07 | 27 |
pre-chordal neural plate | 8.31e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.45e-08 | 2 |