FFCP PHASE1:Hg19::chr20:43936937..43936967,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6910 | |||
|TSSclassifier=strong | |||
|UniProt=O95460,A6NNA4,A2RRP8,A5D8U1 | |||
|association_with_transcript=0bp_to_ENST00000255132,ENST00000342716,ENST00000353917,ENST00000360607,ENST00000372751,NM_003833,NM_030590,NM_030592,uc002xnn.2,uc002xno.2,uc002xnp.2_5end | |||
|cluster_id=chr20:43936937..43936967,- | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_1_at_MATN4_5end | |||
|id=chr20:43936937..43936967,- | |||
|ontology_enrichment_celltype=CL:0002322!1.51e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.21e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.17e-07,6;CL:0000138,1.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.60e-11;1!UBERON:0000358;1.78e-11;1!UBERON:0010115;1.97e-11;1!UBERON:0008801;4.44e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.00e-09!3;UBERON:0004054!1.00e-09!3;UBERON:0003135!7.79e-09!11;UBERON:0005904!2.27e-07!4;UBERON:0000341!4.55e-07!2;UBERON:0007023!6.05e-07!115;UBERON:0002360!6.26e-07!2;UBERON:0000094!6.26e-07!2;UBERON:0007645!6.26e-07!2;UBERON:0004089!6.63e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.41e-14;3!UBERON:0004054;1.41e-14;3!UBERON:0001000;1.31e-11;1!UBERON:0005352;1.31e-11;1!UBERON:0000998;1.60e-11;1!UBERON:0006868;1.60e-11;1!UBERON:0002363;1.97e-11;1!UBERON:0007029;2.82e-11;1!UBERON:0002135;2.82e-11;1!UBERON:0005904;3.64e-11;4!UBERON:0001831;4.44e-11;1!UBERON:0002426;4.44e-11;1!UBERON:0003831;4.44e-11;1!UBERON:0003898;4.44e-11;1!UBERON:0004830;4.44e-11;1!UBERON:0003830;4.44e-11;1!UBERON:0005175;4.44e-11;1!UBERON:0001774;4.44e-11;1!UBERON:0001103;4.44e-11;1!UBERON:0001567;4.44e-11;1!UBERON:0000922;6.32e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.41e-14,3;UBERON:0004054,1.41e-14,3;UBERON:0001000,1.31e-11,1;UBERON:0005352,1.31e-11,1;UBERON:0000998,1.60e-11,1;UBERON:0006868,1.60e-11,1;UBERON:0002363,1.97e-11,1;UBERON:0007645,1.97e-11,1;UBERON:0007647,1.97e-11,1;UBERON:0010115,1.97e-11,1;UBERON:0002135,2.68e-11,1;UBERON:0007029,2.96e-11,1;UBERON:0002426,3.63e-11,1;UBERON:0003831,3.63e-11,1;UBERON:0003898,3.63e-11,1;UBERON:0004830,3.63e-11,1;UBERON:0003830,3.63e-11,1;UBERON:0005175,3.63e-11,1;UBERON:0001774,3.63e-11,1;UBERON:0001103,3.63e-11,1;UBERON:0010084,3.63e-11,1;UBERON:0005904,3.64e-11,4;UBERON:0001831,6.00e-11,1;UBERON:0001567,6.00e-11,1;UBERON:0008801,6.00e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,1.5905718941022,46.716947549053,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0,0,0,0.123563938946503,0,0,1.60515529459758,0,0,0,0,13.0212852940299,1.20990716048664,0,7.14008349801914,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0,0,0,14.010805928393,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,2.79282401272254,0,0,0.199679000498991,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56965421925569,0,0,3.90757005616546,0,0,0,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,10.1612892045823,0,0,0,0,0,0,0,0,1.1598144313382,2.4285549652957,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,18.1741962860862,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.36757959813938,0,0,0,0,0,0.639701945702943,11.903221573187,0.0645889098360061,0,0,0,1.81905470062397,0,0,0,0,33.9313563676934,0,0.213454691755431,0,0,9.38563769613817,0.366724332548599,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p1@MATN4 | |||
}} |
Latest revision as of 11:04, 16 September 2015
Short description: | p1@MATN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MATN4_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | 0bp_to_ENST00000255132, ENST00000342716, ENST00000353917, ENST00000360607, ENST00000372751, NM_003833, NM_030590, NM_030592, uc002xnn.2, uc002xno.2, uc002xnp.2_5end |
EntrezGene: | MATN4 |
HGNC: | 6910 |
UniProt: | O95460A6NNA4A2RRP8A5D8U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.17e-07 | 6 |
chondrocyte | 1.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.41e-14 | 3 |
internal male genitalia | 1.41e-14 | 3 |
vas deferens | 1.31e-11 | 1 |
spermatic cord | 1.31e-11 | 1 |
seminal vesicle | 1.60e-11 | 1 |
seminal fluid secreting gland | 1.60e-11 | 1 |
dura mater | 1.97e-11 | 1 |
future meninx | 1.97e-11 | 1 |
ectomeninx | 1.97e-11 | 1 |
future dura mater | 1.97e-11 | 1 |
mitral valve | 2.68e-11 | 1 |
surface | 2.96e-11 | 1 |
chest muscle | 3.63e-11 | 1 |
respiratory system muscle | 3.63e-11 | 1 |
skeletal muscle of trunk | 3.63e-11 | 1 |
respiratory system skeletal muscle | 3.63e-11 | 1 |
thoracic segment muscle | 3.63e-11 | 1 |
chest organ | 3.63e-11 | 1 |
muscle of trunk | 3.63e-11 | 1 |
diaphragm | 3.63e-11 | 1 |
future diaphragm | 3.63e-11 | 1 |
duct of male reproductive system | 3.64e-11 | 4 |
parotid gland | 6.00e-11 | 1 |
cheek | 6.00e-11 | 1 |
parotid gland primordium | 6.00e-11 | 1 |