FFCP PHASE1:Hg19::chr3:160474013..160474033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151742 | |EntrezGene=151742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16381 | |HGNC=16381 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SGD2 | |UniProt=Q5SGD2 | ||
|association_with_transcript=17bp_to_ENST00000498165,NM_139245,uc003fdr.2_5end | |association_with_transcript=17bp_to_ENST00000498165,NM_139245,uc003fdr.2_5end | ||
|cluster_id=chr3:160474013..160474033,+ | |||
|description=CAGE_peak_5_at_PPM1L_5end | |description=CAGE_peak_5_at_PPM1L_5end | ||
|id=chr3:160474013..160474033,+ | |id=chr3:160474013..160474033,+ | ||
|ontology_enrichment_celltype=CL:0002393!1.46e-09!9;CL:0002397!1.46e-09!9;CL:0002194!6.39e-09!63;CL:0000576!6.39e-09!63;CL:0000040!6.39e-09!63;CL:0000559!6.39e-09!63;CL:0002057!8.91e-09!42;CL:0000766!2.36e-08!76;CL:0002009!2.55e-08!65;CL:0000860!3.22e-08!45;CL:0000839!1.83e-07!70;CL:0000557!3.24e-07!71 | |ontology_enrichment_celltype=CL:0002393!1.46e-09!9;CL:0002397!1.46e-09!9;CL:0002194!6.39e-09!63;CL:0000576!6.39e-09!63;CL:0000040!6.39e-09!63;CL:0000559!6.39e-09!63;CL:0002057!8.91e-09!42;CL:0000766!2.36e-08!76;CL:0002009!2.55e-08!65;CL:0000860!3.22e-08!45;CL:0000839!1.83e-07!70;CL:0000557!3.24e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000875;1.58e-15;3!CL:0002396;1.58e-15;3!CL:0002393;2.64e-07;6!CL:0002397;2.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.85e-18,9;CL:0002397,1.85e-18,9;CL:0000875,1.38e-15,3;CL:0002396,1.38e-15,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.23e-39!115;UBERON:0001049!4.40e-20!57;UBERON:0005068!4.40e-20!57;UBERON:0006241!4.40e-20!57;UBERON:0007135!4.40e-20!57;UBERON:0003080!8.01e-17!42;UBERON:0002616!1.25e-16!59;UBERON:0002780!3.79e-16!41;UBERON:0001890!3.79e-16!41;UBERON:0006240!3.79e-16!41;UBERON:0000955!1.24e-14!69;UBERON:0006238!1.24e-14!69;UBERON:0003075!1.37e-14!86;UBERON:0007284!1.37e-14!86;UBERON:0002346!5.72e-14!90;UBERON:0001017!3.47e-13!82;UBERON:0001893!7.60e-13!34;UBERON:0000073!8.60e-13!94;UBERON:0001016!8.60e-13!94;UBERON:0005743!1.05e-12!86;UBERON:0002020!1.83e-12!34;UBERON:0003528!1.83e-12!34;UBERON:0003056!2.73e-12!61;UBERON:0002791!4.73e-12!33;UBERON:0001869!6.83e-12!32;UBERON:0001950!8.43e-12!20;UBERON:0002619!2.21e-11!22;UBERON:0000153!1.20e-10!129;UBERON:0007811!1.20e-10!129;UBERON:0000956!3.42e-10!25;UBERON:0000203!3.42e-10!25;UBERON:0000033!6.91e-10!123;UBERON:0004121!6.41e-07!169;UBERON:0000924!9.09e-07!173;UBERON:0006601!9.09e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!5.23e-39!115;UBERON:0001049!4.40e-20!57;UBERON:0005068!4.40e-20!57;UBERON:0006241!4.40e-20!57;UBERON:0007135!4.40e-20!57;UBERON:0003080!8.01e-17!42;UBERON:0002616!1.25e-16!59;UBERON:0002780!3.79e-16!41;UBERON:0001890!3.79e-16!41;UBERON:0006240!3.79e-16!41;UBERON:0000955!1.24e-14!69;UBERON:0006238!1.24e-14!69;UBERON:0003075!1.37e-14!86;UBERON:0007284!1.37e-14!86;UBERON:0002346!5.72e-14!90;UBERON:0001017!3.47e-13!82;UBERON:0001893!7.60e-13!34;UBERON:0000073!8.60e-13!94;UBERON:0001016!8.60e-13!94;UBERON:0005743!1.05e-12!86;UBERON:0002020!1.83e-12!34;UBERON:0003528!1.83e-12!34;UBERON:0003056!2.73e-12!61;UBERON:0002791!4.73e-12!33;UBERON:0001869!6.83e-12!32;UBERON:0001950!8.43e-12!20;UBERON:0002619!2.21e-11!22;UBERON:0000153!1.20e-10!129;UBERON:0007811!1.20e-10!129;UBERON:0000956!3.42e-10!25;UBERON:0000203!3.42e-10!25;UBERON:0000033!6.91e-10!123;UBERON:0004121!6.41e-07!169;UBERON:0000924!9.09e-07!173;UBERON:0006601!9.09e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.72e-11;2!UBERON:0001829;1.50e-10;2!UBERON:0001950;9.53e-10;20!UBERON:0002619;8.08e-09;22!UBERON:0000073;2.06e-08;53!UBERON:0002616;2.06e-08;53!UBERON:0002780;9.84e-08;41!UBERON:0001890;9.84e-08;41!UBERON:0000956;1.07e-07;25!UBERON:0000203;1.07e-07;25!UBERON:0001044;1.45e-07;6!UBERON:0003293;1.45e-07;6!UBERON:0003294;1.45e-07;6!UBERON:0010047;1.45e-07;6!UBERON:0003408;1.45e-07;6!UBERON:0000167;1.45e-07;6!UBERON:0000955;1.81e-07;68!UBERON:0001869;6.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.08e-16,114;UBERON:0000073,1.39e-13,53;UBERON:0002616,1.39e-13,53;UBERON:0000955,3.02e-13,68;UBERON:0006238,3.02e-13,68;UBERON:0001049,1.04e-12,56;UBERON:0005068,1.04e-12,56;UBERON:0006241,1.04e-12,56;UBERON:0007135,1.04e-12,56;UBERON:0002780,4.46e-11,41;UBERON:0001890,4.46e-11,41;UBERON:0003080,4.46e-11,41;UBERON:0006240,4.46e-11,41;UBERON:0000007,6.41e-11,2;UBERON:0001829,8.55e-11,2;UBERON:0001017,1.28e-10,81;UBERON:0001950,1.21e-09,20;UBERON:0001016,3.05e-09,89;UBERON:0002619,1.00e-08,22;UBERON:0003075,8.25e-08,82;UBERON:0007284,8.25e-08,82;UBERON:0011216,8.99e-08,223;UBERON:0001044,1.11e-07,6;UBERON:0003293,1.11e-07,6;UBERON:0003294,1.11e-07,6;UBERON:0010047,1.11e-07,6;UBERON:0000167,1.11e-07,6;UBERON:0000956,1.29e-07,25;UBERON:0000203,1.29e-07,25;UBERON:0001869,1.51e-07,32;UBERON:0002346,2.54e-07,86;UBERON:0001893,4.77e-07,34;UBERON:0003056,7.91e-07,61;UBERON:0001894,8.79e-07,7;UBERON:0006222,8.79e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,0,1.10799081706375,0.601633342410425,0.651032612147555,0.223915474239924,0.32389366601898,1.03030227053675,0,0.377875943688809,0.727752183563449,0.232429036905685,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0,1.29096936716765,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0,0,0.329851300186716,0.997318288108159,0,0.290209238628584,0,0,0,0,0.65156653411535,0,0.368277635987565,0.316462387440884,0.845021145247767,1.91343869968539,1.25795187305026,0.22465726229299,0.300353785683013,0,2.85012743741249,3.58050018958362,2.37463399894024,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.523916301990851,0,0,1.62273696827342,1.0447784237956,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0.414415513436035,1.2269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.620304078368662,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0.432807638929335,0.142283686696828,0,0,0,0.211673582723883,0.324621940274555,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,1.97286811273867,0,0,3.87733098438087,1.48428957058962,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0.291604613383254,0.173624994933292,0,0.723578631752448,0,0.774054819518572,2.06883333267483,0.87754158861589,0,0,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,1.08194319871046,0.995261931078505,0.442287822516696,0,0,0,0.208843899010911,0.741412462787447,0,0,0.182454789215666,0,0,0,1.20990716048664,0.61214552326098,0.442306057399416,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.0967563312890851,0,0,0.775912131907355,0,0.677942222341597,0,0,1.51945910294109,0.195551382734803,0.0801588202515337,2.34798294213288,0,0.288180834308212,0,2.05913997434357,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0.599037001496973,0.858452096273142,0.223171457441873,0.201550417460179,0,0,0,0,0,0.295282444544246,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,1.15424157650247,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.517131825446202,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0,1.38328142328561,0.243585196761792,0,0,0.7520696820681,0.612691153526923,0.983617892129413,0.314108192500469,0,0.244052529803926,0.625954653532499,1.14681839138014,0.221858103073705,0.869349641179368,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0.59996218756479,0.320075189082423,0.172214979660816,0,0.368211900503681,0,0,0.127894371303652,0.323474434190045,0.157265941855896,0.109209638192014,0,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.963438376446893,0,0.478901577171454,0.82046545696302,1.00828678488687,2.42050383624763,0.968853873791107,0,0.0981477185010256,0.235939446695481,0,0,0,0,0.397832444232549,0.225630985047772,0,1.56302802246618,0,0,0,1.41828927698629,0,1.44680757550829,0.951237152908602,0.546974809018219,3.28954660114309,0,0,0.383287282918786,0.535701835878287,0.336283722218824,2.42786241694653,2.73194629621557,0.177404740325278,0.115233987555779,0,1.35939465953663,1.24968269769413,0,0,1.33438257845874,0.471346769748006,0,0,0.863710364874486,0,0.7862419859432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| ||
|short_description=p5@PPM1L | |short_description=p5@PPM1L | ||
}} | }} |
Latest revision as of 10:51, 16 September 2015
Short description: | p5@PPM1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPM1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000498165, NM_139245, uc003fdr.2_5end |
EntrezGene: | PPM1L |
HGNC: | 16381 |
UniProt: | Q5SGD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.85e-18 | 9 |
CD14-positive, CD16-positive monocyte | 1.85e-18 | 9 |
non-classical monocyte | 1.38e-15 | 3 |
CD14-low, CD16-positive monocyte | 1.38e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.08e-16 | 114 |
regional part of nervous system | 1.39e-13 | 53 |
regional part of brain | 1.39e-13 | 53 |
brain | 3.02e-13 | 68 |
future brain | 3.02e-13 | 68 |
neural tube | 1.04e-12 | 56 |
neural rod | 1.04e-12 | 56 |
future spinal cord | 1.04e-12 | 56 |
neural keel | 1.04e-12 | 56 |
regional part of forebrain | 4.46e-11 | 41 |
forebrain | 4.46e-11 | 41 |
anterior neural tube | 4.46e-11 | 41 |
future forebrain | 4.46e-11 | 41 |
pituitary gland | 6.41e-11 | 2 |
major salivary gland | 8.55e-11 | 2 |
central nervous system | 1.28e-10 | 81 |
neocortex | 1.21e-09 | 20 |
nervous system | 3.05e-09 | 89 |
regional part of cerebral cortex | 1.00e-08 | 22 |
neural plate | 8.25e-08 | 82 |
presumptive neural plate | 8.25e-08 | 82 |
organ system subdivision | 8.99e-08 | 223 |
saliva-secreting gland | 1.11e-07 | 6 |
gland of oral region | 1.11e-07 | 6 |
gland of foregut | 1.11e-07 | 6 |
oral gland | 1.11e-07 | 6 |
oral cavity | 1.11e-07 | 6 |
cerebral cortex | 1.29e-07 | 25 |
pallium | 1.29e-07 | 25 |
cerebral hemisphere | 1.51e-07 | 32 |
neurectoderm | 2.54e-07 | 86 |
telencephalon | 4.77e-07 | 34 |
pre-chordal neural plate | 7.91e-07 | 61 |
diencephalon | 8.79e-07 | 7 |
future diencephalon | 8.79e-07 | 7 |