FFCP PHASE1:Hg19::chr1:234743812..234743846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=359948 | |EntrezGene=359948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21729 | |HGNC=21729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491430_5end | |association_with_transcript=0bp_to_ENST00000491430_5end | ||
|cluster_id=chr1:234743812..234743846,- | |||
|coexpression_cluster_id=C3952 | |||
|description=CAGE_peak_3_at_IRF2BP2_5end | |description=CAGE_peak_3_at_IRF2BP2_5end | ||
|id=chr1:234743812..234743846,- | |id=chr1:234743812..234743846,- | ||
|ontology_enrichment_celltype=CL:0000766!5.91e-23!76;CL:0002057!1.24e-20!42;CL:0000763!3.63e-20!112;CL:0000049!3.63e-20!112;CL:0000557!1.51e-19!71;CL:0000839!4.30e-19!70;CL:0000860!8.55e-18!45;CL:0000738!1.28e-17!140;CL:0000037!9.51e-17!172;CL:0000566!9.51e-17!172;CL:0002009!1.09e-16!65;CL:0000988!1.78e-16!182;CL:0002194!9.20e-16!63;CL:0000576!9.20e-16!63;CL:0000040!9.20e-16!63;CL:0000559!9.20e-16!63;CL:0002032!4.04e-15!165;CL:0000837!4.04e-15!165;CL:0002031!1.66e-13!124;CL:0002087!6.45e-11!119 | |ontology_enrichment_celltype=CL:0000766!5.91e-23!76;CL:0002057!1.24e-20!42;CL:0000763!3.63e-20!112;CL:0000049!3.63e-20!112;CL:0000557!1.51e-19!71;CL:0000839!4.30e-19!70;CL:0000860!8.55e-18!45;CL:0000738!1.28e-17!140;CL:0000037!9.51e-17!172;CL:0000566!9.51e-17!172;CL:0002009!1.09e-16!65;CL:0000988!1.78e-16!182;CL:0002194!9.20e-16!63;CL:0000576!9.20e-16!63;CL:0000040!9.20e-16!63;CL:0000559!9.20e-16!63;CL:0002032!4.04e-15!165;CL:0000837!4.04e-15!165;CL:0002031!1.66e-13!124;CL:0002087!6.45e-11!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.54e-18;33!CL:0002057;2.54e-18;33!CL:0000576;4.16e-13;48!CL:0000473;8.66e-13;39!CL:0000234;8.66e-13;39!CL:0000766;1.84e-12;69!CL:0000094;1.86e-07;8!CL:0000763;3.77e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.46e-28,72;CL:0000763,3.20e-25,108;CL:0000049,3.20e-25,108;CL:0000738,1.08e-24,136;CL:0000557,2.31e-24,67;CL:0000860,2.44e-24,42;CL:0002057,2.44e-24,42;CL:0000037,7.31e-24,168;CL:0000839,8.32e-24,66;CL:0000988,1.16e-23,177;CL:0002032,1.60e-21,161;CL:0000837,1.60e-21,161;CL:0000473,5.20e-21,48;CL:0000234,5.20e-21,48;CL:0002009,7.36e-21,61;CL:0002194,1.02e-19,59;CL:0000576,1.02e-19,59;CL:0000040,1.02e-19,59;CL:0000559,1.02e-19,59;CL:0002031,3.64e-19,120;CL:0002087,5.71e-16,115;CL:0000094,1.94e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.42e-18;42!CL:0000049;3.49e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.41e-20!115;UBERON:0002371!5.50e-18!80;UBERON:0002193!1.40e-15!112;UBERON:0001474!7.41e-15!86;UBERON:0002390!1.44e-14!102;UBERON:0003061!1.44e-14!102;UBERON:0004765!1.21e-12!101;UBERON:0001434!1.21e-12!101;UBERON:0003081!8.60e-08!216;UBERON:0002204!1.81e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.20e-22,93;UBERON:0002371,5.21e-22,76;UBERON:0002193,2.06e-21,108;UBERON:0002390,1.11e-19,98;UBERON:0003061,1.11e-19,98;UBERON:0001474,2.14e-18,82;UBERON:0004765,4.22e-18,90;UBERON:0001434,4.61e-14,100;UBERON:0003081,1.20e-11,203;UBERON:0002204,1.24e-08,167 | |||
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|short_description=p3@IRF2BP2 | |short_description=p3@IRF2BP2 | ||
}} | }} |
Latest revision as of 10:28, 16 September 2015
Short description: | p3@IRF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRF2BP2_5end |
Coexpression cluster: | C3952_CD14_Eosinophils_cord_Mast_Basophils_Dendritic_Neutrophils |
Association with transcript: | 0bp_to_ENST00000491430_5end |
EntrezGene: | IRF2BP2 |
HGNC: | 21729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.46e-28 | 72 |
myeloid cell | 3.20e-25 | 108 |
common myeloid progenitor | 3.20e-25 | 108 |
leukocyte | 1.08e-24 | 136 |
granulocyte monocyte progenitor cell | 2.31e-24 | 67 |
classical monocyte | 2.44e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.44e-24 | 42 |
hematopoietic stem cell | 7.31e-24 | 168 |
myeloid lineage restricted progenitor cell | 8.32e-24 | 66 |
hematopoietic cell | 1.16e-23 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-21 | 161 |
defensive cell | 5.20e-21 | 48 |
phagocyte | 5.20e-21 | 48 |
macrophage dendritic cell progenitor | 7.36e-21 | 61 |
monopoietic cell | 1.02e-19 | 59 |
monocyte | 1.02e-19 | 59 |
monoblast | 1.02e-19 | 59 |
promonocyte | 1.02e-19 | 59 |
hematopoietic lineage restricted progenitor cell | 3.64e-19 | 120 |
nongranular leukocyte | 5.71e-16 | 115 |
granulocyte | 1.94e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.20e-22 | 93 |
bone marrow | 5.21e-22 | 76 |
hemolymphoid system | 2.06e-21 | 108 |
hematopoietic system | 1.11e-19 | 98 |
blood island | 1.11e-19 | 98 |
bone element | 2.14e-18 | 82 |
skeletal element | 4.22e-18 | 90 |
skeletal system | 4.61e-14 | 100 |
lateral plate mesoderm | 1.20e-11 | 203 |
musculoskeletal system | 1.24e-08 | 167 |