FFCP PHASE1:Hg19::chr16:30996502..30996558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80270 | |EntrezGene=80270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18324 | |HGNC=18324 | ||
|TSSclassifier=strong | |||
|UniProt=Q96M28,Q9H2F3 | |UniProt=Q96M28,Q9H2F3 | ||
|association_with_transcript=0bp_to_ENST00000262520,ENST00000297679,ENST00000353250,NM_001142777,NM_001142778,NM_025193,uc002eaf.2,uc002eag.2,uc010cac.2_5end | |association_with_transcript=0bp_to_ENST00000262520,ENST00000297679,ENST00000353250,NM_001142777,NM_001142778,NM_025193,uc002eaf.2,uc002eag.2,uc010cac.2_5end | ||
|cluster_id=chr16:30996502..30996558,+ | |||
|coexpression_cluster_id=C3560 | |||
|description=CAGE_peak_1_at_HSD3B7_5end | |description=CAGE_peak_1_at_HSD3B7_5end | ||
|id=chr16:30996502..30996558,+ | |id=chr16:30996502..30996558,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.15e-15!180;CL:0000057!5.19e-13!75;CL:0000222!8.00e-07!119 | |ontology_enrichment_celltype=CL:0000055!4.15e-15!180;CL:0000057!5.19e-13!75;CL:0000222!8.00e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.38e-13,76;CL:0000222,9.43e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.63e-14!216;UBERON:0005256!9.30e-12!143;UBERON:0003104!4.30e-09!238;UBERON:0009142!4.30e-09!238;UBERON:0009569!2.80e-08!113;UBERON:0000475!3.33e-08!365;UBERON:0000926!4.41e-08!448;UBERON:0004120!4.41e-08!448;UBERON:0006603!4.41e-08!448;UBERON:0000914!5.48e-08!83;UBERON:0002329!5.48e-08!83;UBERON:0003077!5.48e-08!83;UBERON:0003059!5.48e-08!83;UBERON:0007282!5.48e-08!83;UBERON:0009618!5.48e-08!83;UBERON:0007285!5.48e-08!83;UBERON:0000468!1.46e-07!659;UBERON:0004290!3.96e-07!70 | |ontology_enrichment_uberon=UBERON:0002100!3.63e-14!216;UBERON:0005256!9.30e-12!143;UBERON:0003104!4.30e-09!238;UBERON:0009142!4.30e-09!238;UBERON:0009569!2.80e-08!113;UBERON:0000475!3.33e-08!365;UBERON:0000926!4.41e-08!448;UBERON:0004120!4.41e-08!448;UBERON:0006603!4.41e-08!448;UBERON:0000914!5.48e-08!83;UBERON:0002329!5.48e-08!83;UBERON:0003077!5.48e-08!83;UBERON:0003059!5.48e-08!83;UBERON:0007282!5.48e-08!83;UBERON:0009618!5.48e-08!83;UBERON:0007285!5.48e-08!83;UBERON:0000468!1.46e-07!659;UBERON:0004290!3.96e-07!70 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.23e-12,199;UBERON:0003104,5.46e-11,160;UBERON:0009142,5.46e-11,160;UBERON:0005256,1.02e-08,122;UBERON:0009569,4.06e-08,112;UBERON:0007503,1.13e-07,78;UBERON:0002329,2.20e-07,71;UBERON:0003059,2.20e-07,71;UBERON:0007282,2.20e-07,71;UBERON:0004290,2.20e-07,71;UBERON:0009618,2.20e-07,71;UBERON:0007524,3.22e-07,73;UBERON:0003077,4.80e-07,72;UBERON:0007285,4.80e-07,72 | |||
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| ||
|short_description=p1@HSD3B7 | |short_description=p1@HSD3B7 | ||
}} | }} |
Latest revision as of 10:21, 16 September 2015
Short description: | p1@HSD3B7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSD3B7_5end |
Coexpression cluster: | C3560_Macrophage_Mesenchymal_myxofibrosarcoma_renal_tenocyte_Hepatocyte_liver |
Association with transcript: | 0bp_to_ENST00000262520, ENST00000297679, ENST00000353250, NM_001142777, NM_001142778, NM_025193, uc002eaf.2, uc002eag.2, uc010cac.2_5end |
EntrezGene: | HSD3B7 |
HGNC: | 18324 |
UniProt: | Q96M28Q9H2F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.38e-13 | 76 |
mesodermal cell | 9.43e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.23e-12 | 199 |
mesenchyme | 5.46e-11 | 160 |
entire embryonic mesenchyme | 5.46e-11 | 160 |
trunk mesenchyme | 1.02e-08 | 122 |
subdivision of trunk | 4.06e-08 | 112 |
epithelial vesicle | 1.13e-07 | 78 |
somite | 2.20e-07 | 71 |
presomitic mesoderm | 2.20e-07 | 71 |
presumptive segmental plate | 2.20e-07 | 71 |
dermomyotome | 2.20e-07 | 71 |
trunk paraxial mesoderm | 2.20e-07 | 71 |
dense mesenchyme tissue | 3.22e-07 | 73 |
paraxial mesoderm | 4.80e-07 | 72 |
presumptive paraxial mesoderm | 4.80e-07 | 72 |