FFCP PHASE1:Hg19::chrX:73072534..73072558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7503 | |EntrezGene=7503 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000429829,NR_001564,uc004ebm.1_5end | |association_with_transcript=29bp_to_ENST00000429829,NR_001564,uc004ebm.1_5end | ||
|cluster_id=chrX:73072534..73072558,- | |||
|coexpression_cluster_id=C639 | |coexpression_cluster_id=C639 | ||
|description=CAGE_peak_1_at_XIST_5end | |description=CAGE_peak_1_at_XIST_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.43e-22!57;UBERON:0005068!4.43e-22!57;UBERON:0006241!4.43e-22!57;UBERON:0007135!4.43e-22!57;UBERON:0002616!4.02e-18!59;UBERON:0003080!5.70e-16!42;UBERON:0002780!1.70e-15!41;UBERON:0001890!1.70e-15!41;UBERON:0006240!1.70e-15!41;UBERON:0001017!2.20e-15!82;UBERON:0003075!3.05e-15!86;UBERON:0007284!3.05e-15!86;UBERON:0005743!3.38e-15!86;UBERON:0002346!4.66e-15!90;UBERON:0007023!9.86e-15!115;UBERON:0002020!2.21e-13!34;UBERON:0003528!2.21e-13!34;UBERON:0000955!3.82e-13!69;UBERON:0006238!3.82e-13!69;UBERON:0000073!1.06e-12!94;UBERON:0001016!1.06e-12!94;UBERON:0002791!2.01e-12!33;UBERON:0001893!2.62e-12!34;UBERON:0003056!4.73e-12!61;UBERON:0001869!1.69e-11!32;UBERON:0002619!5.56e-09!22;UBERON:0000033!1.48e-08!123;UBERON:0000956!1.86e-08!25;UBERON:0000203!1.86e-08!25;UBERON:0000153!5.77e-08!129;UBERON:0007811!5.77e-08!129;UBERON:0001950!7.84e-08!20;UBERON:0000924!9.56e-08!173;UBERON:0006601!9.56e-08!173;UBERON:0004121!1.13e-07!169;UBERON:0003076!2.30e-07!15;UBERON:0003057!2.30e-07!15;UBERON:0002420!6.44e-07!9;UBERON:0007245!6.44e-07!9;UBERON:0010009!6.44e-07!9;UBERON:0010011!6.44e-07!9;UBERON:0000454!6.44e-07!9;UBERON:0002308!7.72e-07!9;UBERON:0000125!7.72e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!4.43e-22!57;UBERON:0005068!4.43e-22!57;UBERON:0006241!4.43e-22!57;UBERON:0007135!4.43e-22!57;UBERON:0002616!4.02e-18!59;UBERON:0003080!5.70e-16!42;UBERON:0002780!1.70e-15!41;UBERON:0001890!1.70e-15!41;UBERON:0006240!1.70e-15!41;UBERON:0001017!2.20e-15!82;UBERON:0003075!3.05e-15!86;UBERON:0007284!3.05e-15!86;UBERON:0005743!3.38e-15!86;UBERON:0002346!4.66e-15!90;UBERON:0007023!9.86e-15!115;UBERON:0002020!2.21e-13!34;UBERON:0003528!2.21e-13!34;UBERON:0000955!3.82e-13!69;UBERON:0006238!3.82e-13!69;UBERON:0000073!1.06e-12!94;UBERON:0001016!1.06e-12!94;UBERON:0002791!2.01e-12!33;UBERON:0001893!2.62e-12!34;UBERON:0003056!4.73e-12!61;UBERON:0001869!1.69e-11!32;UBERON:0002619!5.56e-09!22;UBERON:0000033!1.48e-08!123;UBERON:0000956!1.86e-08!25;UBERON:0000203!1.86e-08!25;UBERON:0000153!5.77e-08!129;UBERON:0007811!5.77e-08!129;UBERON:0001950!7.84e-08!20;UBERON:0000924!9.56e-08!173;UBERON:0006601!9.56e-08!173;UBERON:0004121!1.13e-07!169;UBERON:0003076!2.30e-07!15;UBERON:0003057!2.30e-07!15;UBERON:0002420!6.44e-07!9;UBERON:0007245!6.44e-07!9;UBERON:0010009!6.44e-07!9;UBERON:0010011!6.44e-07!9;UBERON:0000454!6.44e-07!9;UBERON:0002308!7.72e-07!9;UBERON:0000125!7.72e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.39e-12;53!UBERON:0002616;2.39e-12;53!UBERON:0003528;3.94e-12;34!UBERON:0002020;3.94e-12;34!UBERON:0002780;1.84e-11;41!UBERON:0001890;1.84e-11;41!UBERON:0002791;2.37e-11;32!UBERON:0001893;2.43e-11;34!UBERON:0001869;1.09e-10;32!UBERON:0002619;2.72e-09;22!UBERON:0000956;9.10e-09;25!UBERON:0000203;9.10e-09;25!UBERON:0001950;4.17e-08;20!UBERON:0002420;4.37e-07;9!UBERON:0007245;4.37e-07;9!UBERON:0010009;4.37e-07;9!UBERON:0010011;4.37e-07;9!UBERON:0000454;4.37e-07;9!UBERON:0000125;5.25e-07;9!UBERON:0002308;5.25e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000073;2.39e-12;53!UBERON:0002616;2.39e-12;53!UBERON:0003528;3.94e-12;34!UBERON:0002020;3.94e-12;34!UBERON:0002780;1.84e-11;41!UBERON:0001890;1.84e-11;41!UBERON:0002791;2.37e-11;32!UBERON:0001893;2.43e-11;34!UBERON:0001869;1.09e-10;32!UBERON:0002619;2.72e-09;22!UBERON:0000956;9.10e-09;25!UBERON:0000203;9.10e-09;25!UBERON:0001950;4.17e-08;20!UBERON:0002420;4.37e-07;9!UBERON:0007245;4.37e-07;9!UBERON:0010009;4.37e-07;9!UBERON:0010011;4.37e-07;9!UBERON:0000454;4.37e-07;9!UBERON:0000125;5.25e-07;9!UBERON:0002308;5.25e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.37e-22,56;UBERON:0005068,2.37e-22,56;UBERON:0006241,2.37e-22,56;UBERON:0007135,2.37e-22,56;UBERON:0000073,2.80e-20,53;UBERON:0002616,2.80e-20,53;UBERON:0002780,4.59e-16,41;UBERON:0001890,4.59e-16,41;UBERON:0003080,4.59e-16,41;UBERON:0006240,4.59e-16,41;UBERON:0001017,7.14e-16,81;UBERON:0003075,1.27e-15,82;UBERON:0007284,1.27e-15,82;UBERON:0002346,4.70e-15,86;UBERON:0007023,5.89e-15,114;UBERON:0003528,7.49e-14,34;UBERON:0002020,7.49e-14,34;UBERON:0010371,1.23e-13,104;UBERON:0000955,1.81e-13,68;UBERON:0006238,1.81e-13,68;UBERON:0001016,5.56e-13,89;UBERON:0001893,9.70e-13,34;UBERON:0002791,1.15e-12,32;UBERON:0001869,6.66e-12,32;UBERON:0003056,9.55e-12,61;UBERON:0010314,1.45e-09,132;UBERON:0002619,2.81e-09,22;UBERON:0000956,9.21e-09,25;UBERON:0000203,9.21e-09,25;UBERON:0001950,4.31e-08,20;UBERON:0004121,1.19e-07,171;UBERON:0000924,1.19e-07,171;UBERON:0006601,1.19e-07,171;UBERON:0003076,1.52e-07,15;UBERON:0003057,1.52e-07,15;UBERON:0002420,4.39e-07,9;UBERON:0007245,4.39e-07,9;UBERON:0010009,4.39e-07,9;UBERON:0010011,4.39e-07,9;UBERON:0000454,4.39e-07,9;UBERON:0000125,5.29e-07,9;UBERON:0002308,5.29e-07,9 | |||
|phase1_expression=25.9800082356896,38.9662953481589,37.4938714895283,19.0139266870948,0,30.5318483435129,10.1319951267324,7.58063848112197,19.8501077431877,9.58362352355885,0,0,0,0,0.331397375727916,2.01697543935533,0,0,0,31.7652329838113,32.0281085253477,39.4952949062391,29.7685426616299,37.777341320116,0,161.537939751169,123.232984764369,134.044460577196,45.236891837624,0,0,0,4.51808878167375,24.403764671008,0,0,0,0,0,0,0,78.382267176593,0,103.378147772271,139.058347277482,0.485168122375632,110.4037925302,149.665111239945,0.929119112685311,122.844651521558,151.134816852169,0.709446689665756,173.751823091256,271.749051788791,4.06279459783025,110.121768632424,157.466848583377,0.449446968890169,185.486838776767,217.910809384668,0,103.903159558816,133.840114264115,1.27867425159808,172.964706222636,201.421754765355,1.86846674698672,153.51293447187,184.083470202331,0.217188844705117,115.631305002973,238.275630483954,0.949387162322653,0,0,0,0,0,0,0,0,0,66.8785728953026,90.6590094695138,77.3873050861293,0,0,89.0866281929449,66.7655321512711,76.3243003628291,91.6432880266212,136.239027934058,0.382273228125229,43.6165384310785,49.8852621053567,53.9937373788908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.2067551258772,97.6625180784628,89.3424921781472,0,0,89.950123117689,96.8418960860029,79.6494157013415,0,0,0,0,0,0,0,0,0,0,0,75.5333189140902,0,63.3288804847439,65.8169854376006,0,0,51.9275829847493,65.2986514872252,0,92.2958716061673,0,142.268223009223,0,5.16140757063675,11.8027770546582,0,14.2629808311368,0,0,0,0,0,14.9046847330384,12.1643536914962,21.7215231217871,21.6921217404063,0,0,0,0.112611480483322,0,0,16.3049552098062,0,0,0,46.7153634593599,39.8886111743426,0,152.023408996871,36.5308433664308,0,12.8098794875646,23.186749551213,0,0,0,0,0,13.5906430463602,0,8.55707732316674,15.9910088190427,58.5998148232387,0,0,0,0,0,0,0.247266929278557,17.2930658768225,11.4978902690598,0,81.9526305161365,0,46.9706054342497,0,0,0,158.401048313265,34.8098543774265,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4271725188802,30.5475655061735,0,0.487894824518382,0.132529768321485,0,0.829288440122964,0,0,0,19.2972281457866,6.90674606762403,0,0,0,0,0,0,0,0,0.134831308160164,0,0,30.2643736396106,15.426595118379,0,0,139.430538304014,0,135.881678536723,0,0,20.245001615226,0,4.49607013030478,20.708968316796,18.6102774768644,18.2452650973782,0,17.3197610430328,19.8240992507381,0,0,0,0,5.53143078571493,9.4433477830436,0,43.5247933158982,0,0,39.8117643831297,0,17.8221460178668,25.2851526507147,4.98397482914775,355.702857760871,56.7031915045176,135.799915679206,123.654920031753,112.103280882625,0,0,0,6.84289784090821,0,0,0,15.8104828926959,0,15.4010400223995,23.0103654048844,0,24.513779824124,39.092903137976,37.4426772880918,0,24.1143524439573,0,45.1810459959746,0,0,9.77208552881205,29.4975317456313,0,39.1871190177462,16.5591357134056,31.59146521353,0,0,56.9251636604185,0,0,44.2174405626227,51.9764890936609,0,40.1096557657366,52.2316771009837,0,0,0,93.5068217138665,152.263629013417,0,82.4180025444996,0,0,0,14.9189584836973,0,0,0,0,118.655277550113,0,0.234282829985426,11.1350056899256,0,5.17365356462525,0,12.9058417979192,0,0,23.3337528191382,93.4591478075451,0,0,0,6.65741758041988,0.30239029332968,21.8334870880524,80.8744599228089,29.4693099154727,29.8564217765783,20.9799972117348,0,5.93672265779964,33.1550841675709,18.111295981939,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2205886962463,0,0,14.3601611898242,14.0473136679359,9.17554582962138,10.8039881160734,17.2383561136077,0,0,21.0289102595439,0,22.1257308371726,28.95452427301,142.939934581434,136.305693868811,0,0,0,40.3116895278149,57.9222800351063,52.6517604310624,0,0,77.438914550198,51.8177894689893,44.6050498590154,46.7756310471568,0,0,0,0.464845549297286,0,0,0,2.66153015158511,0,0,24.9037302931065,36.4715201972474,40.8129457887156,0,9.46821827851935,32.095424102544,0,0,0,73.0268499097906,61.1446368174113,2.62837226045311,0,0,0,0,0,0,0,7.910568163417,11.5786722144686,0,0,0,0.655894752046633,0,12.7027634220898,7.32408566583828,0,0,0,62.0831862123546,0.211107635297664,0,28.0810148586629,38.4928192269481,0,5.3624182042863,0,33.1386178734263,8.17960208075337,0,13.3029046061003,17.9184252161428,58.8639226709316,42.819683599973,78.0416646428603,0,0,53.1748115178028,59.4034580961926,88.036894568664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.6497428962986,0,0,97.9446346687751,0,0,0,0,0,0,0,0,88.5971434874201,0,0,66.8077297479837,48.7869297433044,2.45175445410452,0,0.23874448473769,0,0,196.841234257727,202.563959631138,46.8609648146434,0,0,65.1540921580998,0.276283915531148,139.822675059123,0,0,61.5858383570379,0,0,0,94.2044523832716,9.57932369387759,0,0,37.8493840500353,49.9034495002985,0,61.9216799973066,100.774940985436,0,0,0,0,0,0,330.381536908562,231.303969283532,460.796843677591,351.420888061432,37.238999988147,0,0,68.4570584407942,146.051590640207,122.601652091373,12.2198869325672,0,0,4.46601623624687,13.0984558564663,10.1276607443541,0,58.8675961481343,0,33.8393490925771,32.5463806967448,36.24946278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| ||
|short_description=p1@XIST | |short_description=p1@XIST | ||
}} | }} |
Latest revision as of 10:21, 16 September 2015
Short description: | p1@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 29bp_to_ENST00000429829, NR_001564, uc004ebm.1_5end |
EntrezGene: | XIST |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data