FFCP PHASE1:Hg19::chr5:151051195..151051216,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:151051195..151051216,-
|short_description=p10@SPARC
|description=CAGE_peak_10_at_SPARC_5end
|association_with_transcript=173bp_to_ENST00000524277_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=173bp_to_ENST00000524277_5end | |||
|cluster_id=chr5:151051195..151051216,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_10_at_SPARC_5end | |||
|id=chr5:151051195..151051216,- | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-29!180;CL:0000222!8.31e-18!119;CL:0000057!1.72e-17!75;CL:0000183!1.94e-13!59;CL:0000680!4.77e-13!57;CL:0000056!4.77e-13!57;CL:0000355!4.77e-13!57;CL:0000187!1.60e-12!54;CL:0000192!1.61e-11!42;CL:0000514!1.61e-11!42;CL:0000393!5.77e-11!60;CL:0000211!5.77e-11!60;CL:0000359!1.20e-10!32;CL:0000136!2.75e-09!15;CL:0000213!3.29e-07!57;CL:0000215!3.29e-07!57;CL:0002334!5.09e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.04e-11;32!CL:0000134;3.13e-09;55!CL:0000136;3.87e-09;13!CL:0000192;4.39e-09;43!CL:0000048;2.00e-08;58!CL:0000723;3.18e-08;61!CL:0002334;5.14e-08;12!CL:0000057;2.52e-07;73!CL:0000187;4.15e-07;55!CL:0002494;6.43e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.37e-17,76;CL:0000222,8.97e-17,121;CL:0000680,7.35e-13,58;CL:0000056,7.35e-13,58;CL:0000355,7.35e-13,58;CL:0000187,1.38e-12,55;CL:0000359,3.96e-12,32;CL:0000192,4.47e-12,43;CL:0000514,4.47e-12,43;CL:0000136,1.50e-10,15;CL:0000393,8.92e-10,61;CL:0000211,8.92e-10,61;CL:0000048,2.53e-08,427;CL:0002334,6.48e-08,12;CL:0000723,1.52e-07,433;CL:0002494,7.61e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.39e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.55e-20!84;UBERON:0002049!1.25e-17!79;UBERON:0007798!1.25e-17!79;UBERON:0000055!1.01e-15!69;UBERON:0004535!6.53e-15!110;UBERON:0001009!8.57e-15!113;UBERON:0001981!1.41e-14!60;UBERON:0007500!1.41e-14!60;UBERON:0004537!1.41e-14!60;UBERON:0006965!1.41e-14!60;UBERON:0000914!1.98e-14!83;UBERON:0002329!1.98e-14!83;UBERON:0003077!1.98e-14!83;UBERON:0003059!1.98e-14!83;UBERON:0007282!1.98e-14!83;UBERON:0009618!1.98e-14!83;UBERON:0007285!1.98e-14!83;UBERON:0004290!2.08e-13!70;UBERON:0001134!4.25e-13!61;UBERON:0002036!4.25e-13!61;UBERON:0003082!4.25e-13!61;UBERON:0002385!6.70e-13!63;UBERON:0001015!6.70e-13!63;UBERON:0000383!6.70e-13!63;UBERON:0001637!1.03e-12!42;UBERON:0003509!1.03e-12!42;UBERON:0004572!1.03e-12!42;UBERON:0000475!2.30e-12!365;UBERON:0003914!1.16e-11!118;UBERON:0005256!9.94e-11!143;UBERON:0004573!4.20e-10!33;UBERON:0004571!4.20e-10!33;UBERON:0000468!2.72e-09!659;UBERON:0000486!3.09e-09!82;UBERON:0000490!3.13e-09!138;UBERON:0004111!3.66e-09!241;UBERON:0000477!8.76e-09!286;UBERON:0002100!5.51e-08!216;UBERON:0000119!6.36e-08!312;UBERON:0000483!8.89e-08!309;UBERON:0000025!1.46e-07!194;UBERON:0001013!3.32e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.07e-09;42!UBERON:0003509;1.07e-09;42!UBERON:0004572;1.07e-09;42!UBERON:0004573;2.30e-09;33!UBERON:0004571;2.30e-09;33!UBERON:0007500;5.69e-08;56!UBERON:0001981;5.69e-08;56!UBERON:0004537;5.69e-08;56!UBERON:0001013;7.12e-08;14!UBERON:0000055;7.84e-08;65!UBERON:0002049;1.46e-07;75!UBERON:0007798;1.46e-07;75!UBERON:0002384;2.49e-07;198!UBERON:0000948;3.26e-07;22 | |||
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| ||
|short_description=p10@SPARC | |||
}} | }} |
Latest revision as of 10:17, 16 September 2015
Short description: | p10@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 173bp_to_ENST00000524277_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.37e-17 | 76 |
mesodermal cell | 8.97e-17 | 121 |
muscle precursor cell | 7.35e-13 | 58 |
myoblast | 7.35e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.35e-13 | 58 |
muscle cell | 1.38e-12 | 55 |
vascular associated smooth muscle cell | 3.96e-12 | 32 |
smooth muscle cell | 4.47e-12 | 43 |
smooth muscle myoblast | 4.47e-12 | 43 |
fat cell | 1.50e-10 | 15 |
electrically responsive cell | 8.92e-10 | 61 |
electrically active cell | 8.92e-10 | 61 |
multi fate stem cell | 2.53e-08 | 427 |
preadipocyte | 6.48e-08 | 12 |
somatic stem cell | 1.52e-07 | 433 |
cardiocyte | 7.61e-07 | 16 |