FFCP PHASE1:Hg19::chr19:16606967..16606987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125972 | |EntrezGene=125972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20407 | |HGNC=20407 | ||
|TSSclassifier=strong | |||
|UniProt=Q96L12 | |UniProt=Q96L12 | ||
|association_with_transcript=15bp_to_ENST00000269881,NM_145046,uc002ned.2_5end | |association_with_transcript=15bp_to_ENST00000269881,NM_145046,uc002ned.2_5end | ||
|cluster_id=chr19:16606967..16606987,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_CALR3_5end | |description=CAGE_peak_4_at_CALR3_5end | ||
|id=chr19:16606967..16606987,- | |id=chr19:16606967..16606987,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.12e-17;3!CL:0002202;8.85e-07;9!CL:0002632;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!CL:0000377;1.12e-17;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.74e-09!57;UBERON:0005068!9.74e-09!57;UBERON:0006241!9.74e-09!57;UBERON:0007135!9.74e-09!57;UBERON:0002346!5.04e-07!90 | |ontology_enrichment_uberon=UBERON:0001049!9.74e-09!57;UBERON:0005068!9.74e-09!57;UBERON:0006241!9.74e-09!57;UBERON:0007135!9.74e-09!57;UBERON:0002346!5.04e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0003126;2.35e-08;7!UBERON:0001005;2.35e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7 | |||
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| ||
|short_description=p4@CALR3 | |short_description=p4@CALR3 | ||
}} | }} |
Latest revision as of 10:09, 16 September 2015
Short description: | p4@CALR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CALR3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 15bp_to_ENST00000269881, NM_145046, uc002ned.2_5end |
EntrezGene: | CALR3 |
HGNC: | 20407 |
UniProt: | Q96L12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |