FFCP PHASE1:Hg19::chr17:56315936..56315960,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4025 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6678 | |||
|TSSclassifier=strong | |||
|UniProt=F5H386 | |||
|association_with_transcript=0bp_to_ENST00000543544_5end | |||
|cluster_id=chr17:56315936..56315960,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_2_at_LPO_5end | |||
|id=chr17:56315936..56315960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;8.49e-09;1!CL:0000164;8.49e-09;1!CL:0000502;8.49e-09;1!CL:0000172;8.49e-09;1!CL:0000173;8.49e-09;1!CL:0002595;4.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.85e-09,1;CL:0000164,7.85e-09,1;CL:0000502,7.85e-09,1;CL:0000172,7.85e-09,1;CL:0000173,7.85e-09,1;CL:0002351,7.85e-09,1;CL:0002595,4.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.60e-09;1!UBERON:0006298;1.89e-09;1!CL:0002351;8.49e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;3.11e-11;31!DOID:4430;8.49e-09;1!DOID:1240;1.99e-07;39!DOID:171;2.53e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.93e-11,31;DOID:1240,6.25e-09,39;DOID:4430,7.85e-09,1;DOID:171,2.68e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-16!115;UBERON:0002780!2.93e-13!41;UBERON:0001890!2.93e-13!41;UBERON:0006240!2.93e-13!41;UBERON:0003080!8.16e-13!42;UBERON:0001049!5.03e-11!57;UBERON:0005068!5.03e-11!57;UBERON:0006241!5.03e-11!57;UBERON:0007135!5.03e-11!57;UBERON:0002616!1.92e-10!59;UBERON:0001893!2.17e-10!34;UBERON:0000955!1.13e-09!69;UBERON:0006238!1.13e-09!69;UBERON:0002791!1.36e-09!33;UBERON:0002020!2.35e-09!34;UBERON:0003528!2.35e-09!34;UBERON:0002619!2.98e-09!22;UBERON:0001950!7.44e-09!20;UBERON:0001869!9.36e-09!32;UBERON:0003056!5.36e-08!61;UBERON:0005743!5.96e-08!86;UBERON:0001017!6.16e-08!82;UBERON:0000956!7.66e-08!25;UBERON:0000203!7.66e-08!25;UBERON:0002346!1.27e-07!90;UBERON:0000033!2.92e-07!123;UBERON:0000153!3.02e-07!129;UBERON:0007811!3.02e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.04e-17;2!UBERON:0003127;5.99e-17;2!UBERON:0001044;9.09e-13;6!UBERON:0003293;9.09e-13;6!UBERON:0003294;9.09e-13;6!UBERON:0010047;9.09e-13;6!UBERON:0003408;9.09e-13;6!UBERON:0000167;9.09e-13;6!UBERON:0001831;1.60e-09;1!UBERON:0001567;1.60e-09;1!UBERON:0001736;1.89e-09;1!UBERON:0002372;5.11e-09;1!UBERON:0001961;5.11e-09;1!UBERON:0001744;5.11e-09;1!UBERON:0001042;5.11e-09;1!UBERON:0001735;5.11e-09;1!UBERON:0002346;1.67e-08;4!UBERON:0000923;1.67e-08;4!UBERON:0010316;1.67e-08;4!UBERON:0005291;1.67e-08;4!UBERON:0003834;4.23e-07;5!UBERON:0001533;4.23e-07;5!UBERON:0002050;5.73e-07;5!UBERON:0005423;5.73e-07;5!UBERON:0000161;6.62e-07;19!UBERON:0000166;6.62e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.04e-17,2;UBERON:0003127,5.76e-17,2;UBERON:0001044,9.10e-13,6;UBERON:0003293,9.10e-13,6;UBERON:0003294,9.10e-13,6;UBERON:0010047,9.10e-13,6;UBERON:0000167,9.10e-13,6;UBERON:0001831,1.60e-09,1;UBERON:0001567,1.60e-09,1;UBERON:0008801,1.60e-09,1;UBERON:0001736,1.89e-09,1;UBERON:0006298,1.89e-09,1;UBERON:0002372,5.31e-09,1;UBERON:0001961,5.31e-09,1;UBERON:0001744,5.31e-09,1;UBERON:0001735,5.31e-09,1;UBERON:0003408,7.57e-08,10;UBERON:0003834,4.04e-07,5;UBERON:0001533,4.04e-07,5 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65375590096488,3.06915619677634,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72347885350326,7.51903431270201,0,0,0,0.851692475380653,27.8239329252169,1.22896305723383,2.01308497103174,3.17013369252626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,12.3533752715663,0,0,0,0,0,0,1.07412704805365,14.3240263663524,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.80784592624426,0.411125773940253,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0.513260513652988,0,0.640724475406168,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,1.85613503951397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.746842107858986,0.861074898304078,0,0,0,0,0,0,0,0,1.01839517972415,0,2.47871528518004,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,1.41193548092464,0,0,0,0.147856086217045,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,1521.96356079554,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0.72350050919134,0,0,0,0,0.560544326627578,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,1346.18140574865,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0.22589216407792,0,0,0,0.218559560503957,0,0,1.41405928260976,0,0,0,0,0,0,0,0.535661815816973,0,0,0,569.74176998844,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0.126166424835079,0,0,0.407955318967927,0.801652215796681,0.0918948995348449,0,0,0,0.829169439458779,0.20686599172379,25.8013118100187,0,0,0,0,0,0,0.435433495793923,0.342233301085281,2.08791364345221,39.232046349794,12.6410935487485,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@LPO | |||
}} |
Latest revision as of 10:09, 16 September 2015
Short description: | p2@LPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LPO_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000543544_5end |
EntrezGene: | LPO |
HGNC: | 6678 |
UniProt: | F5H386 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.85e-09 | 1 |
enteroendocrine cell | 7.85e-09 | 1 |
type D enteroendocrine cell | 7.85e-09 | 1 |
somatostatin secreting cell | 7.85e-09 | 1 |
pancreatic D cell | 7.85e-09 | 1 |
progenitor cell of endocrine pancreas | 7.85e-09 | 1 |
smooth muscle cell of the subclavian artery | 4.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.04e-17 | 2 |
open tracheal system trachea | 5.76e-17 | 2 |
saliva-secreting gland | 9.10e-13 | 6 |
gland of oral region | 9.10e-13 | 6 |
gland of foregut | 9.10e-13 | 6 |
oral gland | 9.10e-13 | 6 |
oral cavity | 9.10e-13 | 6 |
parotid gland | 1.60e-09 | 1 |
cheek | 1.60e-09 | 1 |
parotid gland primordium | 1.60e-09 | 1 |
submandibular gland | 1.89e-09 | 1 |
submandibular gland primordium | 1.89e-09 | 1 |
tonsil | 5.31e-09 | 1 |
mucosa-associated lymphoid tissue | 5.31e-09 | 1 |
lymphoid tissue | 5.31e-09 | 1 |
tonsillar ring | 5.31e-09 | 1 |
gland of gut | 7.57e-08 | 10 |
thoracic segment blood vessel | 4.04e-07 | 5 |
subclavian artery | 4.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.93e-11 | 31 |
leukemia | 6.25e-09 | 39 |
somatostatinoma | 7.85e-09 | 1 |
neuroectodermal tumor | 2.68e-07 | 10 |