FFCP PHASE1:Hg19::chr1:117602977..117602984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8458 | |EntrezGene=8458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12398 | |HGNC=12398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000470935_5end | |association_with_transcript=0bp_to_ENST00000470935_5end | ||
|cluster_id=chr1:117602977..117602984,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_3_at_TTF2_5end | |description=CAGE_peak_3_at_TTF2_5end | ||
|id=chr1:117602977..117602984,+ | |id=chr1:117602977..117602984,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.52e-30!140;CL:0000988!4.60e-26!182;CL:0000037!3.84e-25!172;CL:0000566!3.84e-25!172;CL:0002031!8.75e-22!124;CL:0000838!1.90e-21!52;CL:0002087!5.29e-21!119;CL:0000542!7.40e-21!53;CL:0000051!7.40e-21!53;CL:0002032!2.54e-20!165;CL:0000837!2.54e-20!165;CL:0000084!7.93e-13!25;CL:0000827!7.93e-13!25;CL:0000624!5.24e-11!6;CL:0000791!5.78e-11!18;CL:0000789!5.78e-11!18;CL:0002420!5.78e-11!18;CL:0002419!5.78e-11!18;CL:0000790!5.78e-11!18;CL:0000080!7.58e-11!6;CL:0000453!2.68e-08!5;CL:0000945!6.35e-07!24;CL:0000826!6.35e-07!24 | |ontology_enrichment_celltype=CL:0000738!3.52e-30!140;CL:0000988!4.60e-26!182;CL:0000037!3.84e-25!172;CL:0000566!3.84e-25!172;CL:0002031!8.75e-22!124;CL:0000838!1.90e-21!52;CL:0002087!5.29e-21!119;CL:0000542!7.40e-21!53;CL:0000051!7.40e-21!53;CL:0002032!2.54e-20!165;CL:0000837!2.54e-20!165;CL:0000084!7.93e-13!25;CL:0000827!7.93e-13!25;CL:0000624!5.24e-11!6;CL:0000791!5.78e-11!18;CL:0000789!5.78e-11!18;CL:0002420!5.78e-11!18;CL:0002419!5.78e-11!18;CL:0000790!5.78e-11!18;CL:0000080!7.58e-11!6;CL:0000453!2.68e-08!5;CL:0000945!6.35e-07!24;CL:0000826!6.35e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.81e-34;2!CL:0001016;2.81e-34;2!CL:0000453;2.33e-14;5!CL:0000840;3.96e-12;5!CL:0000624;5.67e-12;6!CL:0002393;5.67e-12;6!CL:0002397;5.67e-12;6!CL:0000047;1.38e-09;2!CL:0000771;1.38e-09;2!CL:0000990;2.16e-08;8!CL:0000451;5.07e-07;10!CL:0000081;5.23e-07;11!CL:0000623;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.31e-34,2;CL:0001016,1.31e-34,2;CL:0000453,1.72e-14,5;CL:0000840,3.08e-12,5;CL:0001029,3.08e-12,5;CL:0000624,5.37e-12,6;CL:0000771,1.22e-09,2;CL:0000738,4.63e-09,136;CL:0000988,1.76e-08,177;CL:0000990,1.83e-08,8;CL:0002393,3.07e-08,9;CL:0002397,3.07e-08,9;CL:0002031,3.67e-08,120;CL:0002032,1.54e-07,161;CL:0000837,1.54e-07,161;CL:0000037,3.43e-07,168;CL:0000451,4.43e-07,10;CL:0000081,5.00e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!2.76e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-10!102;UBERON:0003061!3.79e-10!102;UBERON:0002193!2.02e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TTF2 | |short_description=p3@TTF2 | ||
}} | }} |
Latest revision as of 10:00, 16 September 2015
Short description: | p3@TTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTF2_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | 0bp_to_ENST00000470935_5end |
EntrezGene: | TTF2 |
HGNC: | 12398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.31e-34 | 2 |
immature CD1a-positive Langerhans cell | 1.31e-34 | 2 |
Langerhans cell | 1.72e-14 | 5 |
immature conventional dendritic cell | 3.08e-12 | 5 |
common dendritic progenitor | 3.08e-12 | 5 |
CD4-positive, alpha-beta T cell | 5.37e-12 | 6 |
eosinophil | 1.22e-09 | 2 |
leukocyte | 4.63e-09 | 136 |
hematopoietic cell | 1.76e-08 | 177 |
conventional dendritic cell | 1.83e-08 | 8 |
intermediate monocyte | 3.07e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.07e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 3.67e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.54e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-07 | 161 |
hematopoietic stem cell | 3.43e-07 | 168 |
dendritic cell | 4.43e-07 | 10 |
blood cell | 5.00e-07 | 11 |